HHsearch 1.5 NAME c5okcI_ FAM FILE c5okcI_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5okcI_.a3m DATE Sat Dec 23 08:26:55 2017 LENG 27 match states, 27 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.6 EVD 0.4999 4.4356 SEQ >ss_dssp CCCCCCCCCSSCCCCCCCCCCHHHHCC >sa_dssp EEEEEEEEEEEEEEEEEEEEDEEEEEE >ss_pred CCEEEEEECCCHHHHHHHCCCHHHHCC >ss_conf 914999952430156640377777209 >Consensus txriWVkyxEGfSnAVRknixWxxlWx >c5okcI_ TVKIWVKYNEGFSNAVRKNVTWNNLWE >UniRef50_Q6CV97(738-763:763) KLLA0B13739p n=1 Tax=Kluyveromyces lactis RepID=Q6CV97_KLULA E=2e-05 s/c=1.93 id=70% cov=100% -MRIWVKYKEGFSNAVRKNISWSQLWE >UniRef50_C4R565(720-745:747) Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C n=1 Tax=Pichia pastoris GS115 RepID=C4R565_PICPG E=4e-05 s/c=1.90 id=70% cov=100% TGRIWVRYNEGFSNAVRRNITWEELW- >UniRef50_A7TRM5(733-757:757) Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TRM5_VANPO E=0.0002 s/c=1.88 id=77% cov=96% --RIWVKYKEGFSNAVRKNVNWNSLWQ >UniRef50_B9WKV0(824-849:851) Chromosome transmission fidelity protein, putative n=4 Tax=Candida RepID=B9WKV0_CANDC E=4e-09 s/c=2.42 id=78% cov=100% TSRIWVKYNEGFSNAVRKNIGWNDLW- >UniRef50_Q75DK2(705-730:730) ABR019Cp n=1 Tax=Eremothecium gossypii RepID=Q75DK2_ASHGO E=2e-07 s/c=2.19 id=74% cov=100% -LKIWVKYKEGFSNAVRKNVKWGTLWQ >UniRef50_C5DGJ7(677-702:702) KLTH0D05852p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DGJ7_LACTC E=3e-07 s/c=2.16 id=81% cov=100% -VKIWVKYKEGFSDAVRKDVTWNSLWE >UniRef50_C5DZE8(681-705:706) ZYRO0G03806p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DZE8_ZYGRO E=4e-05 s/c=1.97 id=62% cov=96% -IRTWVRYKEGFSDAVRKNVAWSSLW- >UniRef50_C4XY15(758-782:784) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XY15_CLAL4 E=2e-07 s/c=2.28 id=64% cov=93% --RIWVKHHEGYSNAVRKNIGWQDLW- >UniRef50_A5DS23(867-891:892) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DS23_LODEL E=1e-06 s/c=2.17 id=68% cov=93% --RIWVNYNEGFSNAVRKEITWSDFW- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1261 0 0 V 2 * * * * * 2650 * 2653 * 2834 2886 * * * * 2886 * 1884 * * 2 0 * * * * * * 1542 0 0 K 3 * * * * * * * * 1935 * * * * * 437 * * * * * 3 0 * * * * * * 1572 0 0 I 4 * * * * * * * 164 * * * * * * * * 3220 * * * 4 0 * * * * * * 1572 0 0 W 5 * * * * * * * * * * * * * * * * * * 0 * 5 0 * * * * * * 1572 0 0 V 6 * * * * * * * * * * * * * * * * * 0 * * 6 0 * * * * * * 1572 0 0 K 7 * * * * * * * * 538 * * 3302 * * 2252 * * * * * 7 0 * * * * * * 1572 0 0 Y 8 * * * * * * 3028 * * * * * * * * * * * * 189 8 0 * * * * * * 1572 0 0 N 9 * * * * * * 3028 * 1171 * * 1207 * * * * * * * * 9 0 * * * * * * 1572 0 0 E 10 * * * 0 * * * * * * * * * * * * * * * * 10 0 * * * * * * 1572 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 1572 0 0 F 12 * * * * 189 * * * * * * * * * * * * * * 3028 12 0 * * * * * * 1572 0 0 S 13 * * * * * * * * * * * * * * * 0 * * * * 13 0 * * * * * * 1572 0 0 N 14 * * 2311 * * * * * * * * 325 * * * * * * * * 14 0 * * * * * * 1572 0 0 A 15 0 * * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1572 0 0 V 16 * * * * * * * * * * * * * * * * * 0 * * 16 0 * * * * * * 1572 0 0 R 17 * * * * * * * * * * * * * * 0 * * * * * 17 0 * * * * * * 1572 0 0 K 18 * * * * * * * * 156 * * * * * 3285 * * * * * 18 0 * * * * * * 1572 0 0 N 19 * * 3407 3302 * * * * * * * 314 * * * * * * * * 19 0 * * * * * * 1572 0 0 V 20 * * * * * * * 845 * * * * * * * * * 1173 * * 20 0 * * * * * * 1572 0 0 T 21 3220 * * * * 1871 * * 3493 * * 3743 * * * 3659 1409 * * * 21 0 * * * * * * 1572 0 0 W 22 * * * * * * * * * * * * * * * * * * 0 * 22 0 * * * * * * 1572 0 0 N 23 * * * 3285 * 3493 * * * * * 1662 * 3028 * 1797 3607 * * * 23 0 * * * * * * 1572 0 0 N 24 * * 1416 3285 * * * * * * * 3673 * 3659 * 1856 3493 * * * 24 0 * * * * * * 1572 0 0 L 25 * * * * 2447 * * * * 292 * * * * * * * * * * 25 0 * * * * * * 1572 0 0 W 26 * * * * * * * * * * * * * * * * * * 0 * 26 0 * * * * * * 1572 0 0 E 27 * * * 1017 * * * * * * * * * 1680 2366 * * * * * 27 0 * * 0 * * * 1424 0 0 //