HHsearch 1.5 NAME c5o60g_ FAM FILE c5o60g_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5o60g_.a3m DATE Sat Jul 15 08:29:02 2017 LENG 48 match states, 48 columns in multiple alignment FILT 91 out of 95 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.4333 1.1740 SEQ >ss_dssp CCTTTSCCCEEEEEEETTSCEEEEEESCSSCEEEESCCTTTCHHHHTC >sa_dssp EEEEEDEDECEBDCEBEDEDEEEDECEDEECDCEDEECDDCDDEEDEE >ss_pred CCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEECCC >ss_conf 988789970789999779989998012456639999718986521049 >Consensus MKkxIHPxyxxvxvxcxcgxxfxtxSTxxxxxixvdVcSxcHPFyTGk >c5o60g_ MKTGIHPEYVDTTVQCGCGHSFTTRSTKQSGTIVVEVCSQCHPFYTGK >UniRef50_Q2S3E3(1-48:84) 50S ribosomal protein L31 n=2 Tax=Rhodothermaceae RepID=RL31_SALRD E=9e-06 s/c=1.07 id=45% cov=102% MQHDLHPEYSEVTIQLADGSEITTRSTMETDSYETEVDSTNHPFYTGR >UniRef50_B3PMQ1(1-46:71) 50S ribosomal protein L31 n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=RL31_MYCA5 E=2e-07 s/c=1.23 id=43% cov=96% MKKEIHPNFKEVKATCtSCGKEHIFGSTVEK--ISLDVCSNCHAFYTG- >UniRef50_Q4FQE4(1-60:93) 50S ribosomal protein L31 type B n=13 Tax=Bacteria RepID=RL31B_PSYA2 E=0.0002 s/c=0.78 id=37% cov=102% MRKDIHPNYQEVLFHDTNADVfFLTRSTVKTKTTReyegseypyypLDISSASHPFYTGE >UniRef50_A8J3Z3(36-80:136) 50S ribosomal protein L31 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3Z3_CHLRE E=6e-08 s/c=1.30 id=40% cov=94% -KEGIHPQwFEEAKVICNGVEVMTVGGTK--ATYNVDIYSGNHPFYQG- >UniRef50_P47499(1-49:97) 50S ribosomal protein L31 n=3 Tax=Mycoplasma RepID=RL31_MYCGE E=3e-10 s/c=1.35 id=35% cov=102% MKKAIHFQSQPVVFNCaSCNSNFTIDSTAKQKDLAIDICGKCHPFYIGQ >UniRef50_B7IQY4(1-61:81) 50S ribosomal protein L31 type B n=77 Tax=Firmicutes RepID=RL31B_BACC2 E=5e-10 s/c=1.07 id=43% cov=102% MKAGIHPDYKKVVFmDTNTGFKFLSGSTKgssetvewedgnTYPLLKVEISSDSHPFYTGR >UniRef50_Q9RW44(1-46:73) 50S ribosomal protein L31 n=1 Tax=Deinococcus radiodurans RepID=RL31_DEIRA E=5e-09 s/c=1.35 id=34% cov=98% MQKDLHPKAVPCKIIYQGQVVMETMSTRPE--IHVDVWSGVHPFWTGE >UniRef50_B8F7K7(1-62:88) 50S ribosomal protein L31 type B n=9 Tax=Proteobacteria RepID=RL31B_HAEPS E=2e-07 s/c=0.93 id=33% cov=102% MKKGIHPEnYREVLFYdgsvqqgwiirscAATNKTMVWEDGKEYPLYPLDTSSASHPVYTGK >UniRef50_B2ICM8(1-49:76) 50S ribosomal protein L31 n=12 Tax=Alphaproteobacteria RepID=RL31_BEII9 E=4e-10 s/c=1.34 id=38% cov=100% MKADIHPQYHLIKVVMTDGTEFQTRSTygEEGATLNLDIDPKTHPAWTG- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 3802 0 0 K 2 * * * * * * * * 364 * * 5707 * 3180 3420 * * * * * 2 0 * * * * * * 4057 0 0 T 3 3179 * 4596 2973 * * 5525 * 1007 * * * 3343 5100 5322 5571 5175 * * * 3 0 * * * * * * 4083 0 0 G 4 4905 * 1292 3627 * 1774 * * 5338 * * 2768 * * * 6228 * * * * 4 0 * * * * * * 4083 0 0 I 5 * * * * 5869 * * 262 5884 3790 * * * * * * 4439 6213 * * 5 0 * * * * * * 4083 0 0 H 6 * * * * * * 76 * * * * * * 4289 * * * * * * 6 0 * * * * * * 4083 0 0 P 7 * * * * 5614 * * * * 5492 5806 * 90 * * * * * * * 7 22 6042 * 0 * * * 4083 1000 0 E 8 5815 * 3373 2119 * * * * 1833 * * 2587 * 3157 * 6213 4329 4917 * * 8 117 3688 * 0 * * * 4083 2094 0 Y 9 5135 * * * 3744 * * * * 4190 4980 * * * * 4405 4188 6040 * 529 9 36 5348 * 0 * * * 4083 1453 0 V 10 5864 * * 2980 3973 7102 2716 7076 3294 * 6500 3311 6963 3603 2779 5525 5766 3578 * 4266 10 78 4250 * 0 * * * 4083 1722 0 D 11 5198 * 3253 1506 * * * * 3461 4866 * 6154 2449 3407 * 5270 4014 6469 * * 11 14 6726 * 0 * * * 4083 1000 0 T 12 2336 3893 * * * * * 2765 * 5492 * * * * * 6270 3074 1206 * * 12 0 * * * * * * 4083 0 0 T 13 5162 6290 * 4564 * * 6688 5081 2131 3192 * 5500 5869 4904 6127 4412 2022 2643 * * 13 11 6989 * 0 * * * 4083 1000 0 V 14 3942 * * * 1643 * * 2666 * 6154 * * * * * * * 1321 * 4540 14 279 2507 * 939 1064 * * 4083 2370 0 Q 15 * * 2637 * 4877 * 5532 3025 4775 5190 6985 3832 * 4174 4409 3387 2686 3404 * 3821 15 98 3923 * 1745 511 * * 4083 2152 0 C 16 3710 605 5532 * * * * * * 4702 5202 * * * * 4593 4207 4194 * 5135 16 201 2942 * 0 * * * 4083 2450 0 G 17 2283 * 6228 * * 4009 5278 * 6515 * * 2603 * 5135 * 1695 2800 4759 * * 17 90 4050 * 0 * * * 4083 1839 0 C 18 5210 919 3930 * * 2748 * * * * * 3735 * * * 4934 3036 * * * 18 22 6042 * 1000 1000 * * 4083 1000 0 G 19 4767 * 4049 3318 5492 768 * * 4294 * * 3166 * 5919 * * * 6153 * * 19 0 * * * * * * 4083 0 0 H 20 4265 * 4802 4175 3016 * 4429 * 2988 4910 * 1934 * 6515 * 3863 3538 4777 * 3980 20 0 * * * * * * 4083 0 0 S 21 6348 6461 * 2277 * * 6031 * 2638 * 6599 5614 * 5170 5701 3546 2413 2132 * 6084 21 32 5532 * 0 * * * 4083 1075 0 F 22 4810 * * * 938 * 4494 3297 * 5285 2857 * * * * * * 5372 5018 3686 22 0 * * * * * * 4083 0 0 T 23 6031 * 5492 3230 * * 6974 3290 3654 2728 * 6788 5694 3274 5869 * 2194 2757 * * 23 0 * * * * * * 4083 0 0 T 24 4298 4966 * * 4037 6135 * 3250 * 4676 * * * * * 4161 935 3465 5137 * 24 0 * * * * * * 4083 0 0 R 25 6640 * 4761 6238 6135 1776 6733 5709 3935 4099 5919 5596 * 6040 1482 5869 6042 5492 * 5923 25 0 * * * * * * 4083 0 0 S 26 6031 * 4781 * * 3438 * * * * * * * * * 289 4734 * * * 26 0 * * * * * * 4083 0 0 T 27 5298 6290 * * * 5137 * 6270 * * * 6500 * * * 4896 237 5190 * * 27 245 2938 5294 3100 179 * * 4083 2449 0 K 28 3124 * * 6092 * * * 4850 1330 4625 4261 * * 3128 3409 5872 * 3060 * * 28 368 3983 2626 3542 130 0 * 4069 1808 1425 Q 29 3551 * 3241 2320 * 6442 6286 * 2109 * * 4867 2807 5718 4463 5497 3873 * 5597 * 29 79 5129 5322 3533 130 1179 841 4064 1328 2556 S 30 5502 6539 * 2032 * 2638 * * 3214 6170 * 4039 * 5331 * 3387 4179 * * 2294 30 680 5322 1511 3459 138 237 2723 4074 1370 2451 G 31 3531 * 3137 3951 * 3080 5114 * 3185 5363 * 5131 1510 * * 5392 4314 * * * 31 0 * * * * 3084 181 3772 0 3084 T 32 6280 * 3412 2494 * * * * * 2038 * * * * 4786 3740 2311 2981 * 4922 32 88 4772 5451 3545 129 0 * 3814 1624 3024 I 33 6005 5878 * * 4528 * * 1480 * 2489 3746 * * * * * 5110 2925 * 2716 33 0 * * * * * 0 4075 0 1000 V 34 3743 * 6312 5490 * * 3297 * 2663 5696 * 4128 5375 4307 2511 3235 4476 3085 * 4823 34 28 5716 * 2757 231 0 * 4075 1575 1000 V 35 5429 * * * * * * 2063 * 2250 5116 * * * * * 5525 1069 * * 35 0 * * * * * * 4083 0 0 E 36 * * 852 1319 * 5144 * * * * * * * * * 5889 * * * * 36 0 * * * * * * 4083 0 0 V 37 * * * * * * * 1321 * 4880 * * * * * * 3996 991 * * 37 0 * * * * * * 4083 0 0 C 38 * 919 3930 * * * * * * * * * * * * 2306 4030 * 2965 6153 38 0 * * * * * * 4083 0 0 S 39 3959 * * * * 4675 * * * * * 4668 4047 * * 328 * * * * 39 0 * * * * * * 4083 0 0 Q 40 2991 * 3626 3327 * 2707 6040 * 2489 6469 * 2536 * 4275 * 3476 5525 * * * 40 0 * * * * * * 4083 0 0 C 41 * 919 * * * * * * * * * 2885 * * * 2067 4265 4469 * * 41 0 * * * * * * 4083 0 0 H 42 * * * * * * 0 * * * * * * * * * * * * * 42 0 * * * * * * 4083 0 0 P 43 5249 * * * * * * * * * * * 129 * * 5732 5083 6493 * * 43 0 * * * * * * 4083 0 0 F 44 4511 * * * 210 * * * * 6268 6084 * * * * * * 4358 * 6025 44 0 * * * * * * 4083 0 0 Y 45 * * * * 2108 * * * * * * * * * * * * * 2972 643 45 0 * * * * * * 4083 0 0 T 46 6495 * * * * * * 3765 * 5804 * * * 4083 * 6048 308 6025 * * 46 0 * * * * * * 4083 0 0 G 47 * * * * * 0 * * * * * * * * * * * * * * 47 0 * * * * * * 4083 0 0 K 48 * * * 2505 * * * * 888 * * * * 2789 2849 * * * * * 48 0 * * 0 * * * 3626 0 0 //