HHsearch 1.5 NAME c5o60c_ FAM FILE c5o60c_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5o60c_.a3m DATE Sat Jul 15 08:23:56 2017 LENG 49 match states, 49 columns in multiple alignment FILT 49 out of 53 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.4665 1.3411 SEQ >ss_dssp CCSCEEEEEESSSCCEEEEEECCTTTCCSCCEEEEEETTTTEEEEEEEC >sa_dssp EDECEBCACADECEDEDCEDEBCDEEDEEDCEDEDDAEECDEECDACCE >ss_pred CCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEC >ss_conf 9513999996366761378750899984389998226777715554219 >Consensus dxRxxixLxCtxcxxxnYxtxKNkrnxperlelkKycpxcxkhtxhkET >c5o60c_ DVRPKITLACEVCKHRNYITKKNRRNDPDRLEIKKFCPNCGTHQPHKES >UniRef50_Q83IB5(7-54:56) 50S ribosomal protein L33 n=52 Tax=Actinobacteria (class) RepID=RL33_TROW8 E=1e-06 s/c=1.14 id=43% cov=100% DVRPIVKLKSTAGTGFTYVTRKNRRNDPDRIVLKKYDPIIRRHTEFRE- >UniRef50_B1AJH4(3-49:53) 50S ribosomal protein L33 n=17 Tax=Mycoplasmataceae RepID=RL33_UREP2 E=2e-05 s/c=1.08 id=44% cov=98% -IKRGVRLQCNESKSINYITTKNAKNNPDRLSLNKFCPKCRKVTTHVE- >UniRef50_C1EF84(44-97:100) 50S ribosomal protein L33 n=13 Tax=cellular organisms RepID=C1EF84_9CHLO E=4e-09 s/c=1.16 id=45% cov=100% DVRLTITLECTEqkesgvAGMSRYMTQKNRRNTSQRLELMKYNPYLRKHTLHRE- >UniRef50_C0MAN4(1-48:48) 50S ribosomal protein L33 n=3 Tax=Streptococcus dysgalactiae group RepID=C0MAN4_STRE4 E=3e-07 s/c=1.17 id=37% cov=100% -MRVKIHLECSHCGSKNYLTSKNKTSHPEKIKVPKYCPKERKVTLHVES >UniRef50_Q1J9H3(5-49:50) 50S ribosomal protein L33 2 n=43 Tax=Bacilli RepID=RL332_STRPB E=7e-06 s/c=1.15 id=43% cov=94% ----KASLACVECGSRNYSIGVSSTPKPTRLEVNKFCKYCKTYTLHKET >UniRef50_A1WB80(7-52:56) 50S ribosomal protein L33 n=122 Tax=cellular organisms RepID=RL33_ACISJ E=0.0003 s/c=1.01 id=34% cov=96% --REKIKLVSTAETGHFYTTTKNKKTMPEKMSIIKFDPKARKHVEYKE- >UniRef50_Q035T6(5-48:49) 50S ribosomal protein L33 2 n=19 Tax=Lactobacillales RepID=RL332_LACC3 E=0.0001 s/c=1.09 id=44% cov=92% ----KVALACSVCGQRNYFVPENPK-RTERLTLKKFCKHCGRVTVHQET # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 345 3496 * * * * * * * 3011 * * * * * * * * 1 0 * * * * * * 2331 0 0 V 2 5051 * * * * * * 2844 * * 1405 * * * * * 3643 1424 * * 2 0 * * * * * * 3105 0 0 R 3 * * * * * * * * 4490 * * * * * 66 * * * * * 3 0 * * * * * * 3349 0 0 P 4 * * 3519 2492 * * * 1855 * 4483 * 4036 3487 * 5040 * * 2100 * * 4 0 * * * * * * 3459 0 0 K 5 5000 * * * * 3832 4345 2774 1592 4145 * 4297 * 3328 5162 * 4352 3515 * * 5 0 * * * * * * 3632 0 0 I 6 3245 * * * 3913 * * 1029 * * * * * * * * * 1565 * * 6 0 * * * * * * 3696 0 0 T 7 3322 * * * * 5580 4667 2251 2403 * * 5017 * * 4637 3059 2170 5194 * * 7 0 * * * * * * 3696 0 0 L 8 * * * * * * * 5418 * 81 5017 * * * * * * * * * 8 0 * * * * * * 3696 0 0 A 9 2225 * * 1460 * 5043 * 6147 3431 4593 * * * 4822 5368 * 5400 2637 * * 9 0 * * * * * * 3696 0 0 C 10 * 350 * * * * * * * * * 5043 * * * 2434 * * * * 10 0 * * * * * * 3696 0 0 E 11 5480 * 5043 4283 * 5400 * * 5671 * * 4766 * 5580 4017 2786 1000 3502 * * 11 0 * * * * * * 3696 0 0 V 12 2434 * 4182 1224 * * 5352 * * * * 5400 * 3624 * 3248 * 3362 * * 12 58 4654 * 2585 263 * * 3696 1390 0 C 13 4319 735 5595 5120 * 3187 * * 5274 * * * * * * 3949 3332 * * * 13 119 3658 * 3201 166 * * 3696 1557 0 K 14 * * * * * 1156 5882 * 2037 5045 * * * * 5144 5012 2440 5884 * * 14 61 4601 * 3144 173 * * 3694 1547 0 H 15 5546 * 5597 2988 * 2440 5005 4187 4945 5399 3993 5707 * 4540 3417 2145 4818 5299 * * 15 0 * * * * * * 3694 0 0 R 16 5407 * * 4721 3307 * 4449 3770 3694 * * 4078 * 5282 1346 2995 * 5600 * 5896 16 41 5144 * 3341 150 * * 3694 1076 0 N 17 * * 3911 * 2916 * 5399 4031 * * * 1010 * * 2576 * 4272 * * * 17 25 5884 * 3322 152 * * 3694 1000 0 Y 18 * * * * * * * * * * * * * * * * * * * 0 18 0 * * * * * * 3694 0 0 I 19 * * * * 5378 * 4674 2301 5030 3804 5944 * * * * 3050 1963 2339 * 4624 19 0 * * * * * * 3694 0 0 T 20 5596 * * * * 5546 * 3751 4460 * * * * * * 3977 549 3455 * * 20 0 * * * * * * 3694 0 0 K 21 4759 * * 3538 * 4919 * * 3023 * 6158 5045 4542 3754 3689 3285 1479 * 5597 * 21 0 * * * * * * 3694 0 0 K 22 3679 * * 5378 * * * * 317 * * * * * 4011 * * 4919 * * 22 27 * 5727 * * * * 3694 0 0 N 23 5004 * * * * * * * * * * 217 * * * 3204 * * * * 23 0 * * * * 0 * 3693 0 1000 R 24 5632 * * * * 4250 * * 1282 * * * 2649 * 1723 4220 * * * * 24 28 * 5722 * * * * 3694 0 0 R 25 * * 4310 * * * 4101 * 2080 4963 * * 5642 4838 1097 * 3317 * * * 25 67 * 4470 * * 0 * 3694 0 1000 N 26 * * * * * * * * 3007 5258 * 929 4814 4196 * 5306 2260 * * * 26 0 * * * * 0 * 3668 0 1307 D 27 * * 3959 * * * 2938 * 3224 5277 3461 3137 * 4274 3642 * 1782 4462 * * 27 74 * 4329 * * * * 3694 0 0 P 28 * * * 5640 * * * * 4945 4341 * * 884 3591 * 4472 2132 * * * 28 0 * * * * 939 1064 3650 0 1457 D 29 4821 * 1998 1265 * 4181 * * * * * 5253 * 3869 5002 4076 4857 5407 * * 29 0 * * * * * 0 3661 0 1000 R 30 * * * * * * * * 1453 * * * * 5170 720 * * * * * 30 0 * * * * 0 * 3661 0 1000 L 31 * * * * 3984 * * 2747 * 631 5125 * * * * * * 3138 * * 31 0 * * * * * * 3694 0 0 E 32 * * * 657 * * * * 3844 * * * * 6002 5012 3654 4112 3156 * * 32 0 * * * * * * 3694 0 0 I 33 * * * * 3341 * * 2783 * 745 5399 * * * * * * 2884 * * 33 0 * * * * * * 3694 0 0 K 34 * * * * * * * 5125 944 * 3675 3812 5356 * 2319 3693 * * * * 34 0 * * * * * * 3694 0 0 K 35 * * * * * * * * 0 * * * * * * * * * * * 35 0 * * * * * * 3694 0 0 F 36 * * * * 1237 * * * * * * * * * * * * * * 796 36 0 * * * * * * 3694 0 0 C 37 * 642 2440 * * * * * * * * 3369 * * * 3675 * * * * 37 0 * * * * * * 3694 0 0 P 38 5679 * * * * * * * 2638 * * * 625 * 4124 3840 4497 * * * 38 0 * * * * * * 3694 0 0 N 39 * * * * 4062 * 2716 4107 2224 * * 3975 * 4574 2747 * 4215 3168 * 3380 39 0 * * * * * * 3694 0 0 C 40 5125 958 4979 4381 * * * 5798 * 2177 * * * * * * * 2861 * * 40 0 * * * * * * 3694 0 0 G 41 * * * * 5201 3691 5049 * 2607 * * 2193 * 5012 1340 5282 * * * 5027 41 0 * * * * * * 3694 0 0 T 42 4009 * * 5021 * * * 5658 642 * * * * 5868 2628 5721 4363 * * * 42 0 * * * * * * 3694 0 0 H 43 5021 * * * * * 575 * 5425 * 4621 * * 5722 5012 5955 * 2892 * 4919 43 0 * * * * * * 3694 0 0 Q 44 5012 * * * * * * * 4329 * * * * 4781 * 4339 651 2348 * * 44 0 * * * * * * 3694 0 0 P 45 * * 5879 2409 * * * 2832 * 1375 * 5584 4631 5596 * * 4134 2943 * * 45 0 * * * * * * 3694 0 0 H 46 * * * * 2324 * 518 * * * * * * 4945 * * * * * 3847 46 0 * * * * * * 3694 0 0 K 47 * * 5030 * * 4111 * * 1072 * * * * 5378 1979 5797 4689 3302 * * 47 0 * * * * * * 3694 0 0 E 48 * * * 0 * * * * * * * * * * * * * * * * 48 0 * * * * * * 3694 0 0 S 49 * * * * * * * * * * * * * * * 3086 181 * * * 49 0 * * 0 * * * 3015 0 0 //