HHsearch 1.5 NAME c5o60U_ FAM FILE c5o60U_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5o60U_.a3m DATE Sat Jul 15 08:25:00 2017 LENG 97 match states, 97 columns in multiple alignment FILT 100 out of 252 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4377 0.5556 SEQ >ss_dssp CCCCCHHHHEEEECCSHHHHHHHTTTEEEEEECTTCCHHHHHHHHHHHSCCCEEEEEEEEECCCEECCSSCCEECCCEEEEEEEECTTCCCCSTTCC >sa_dssp EEEEDBEECCEDDBDDEEBDDCCEECBBBBCADDEADDEDADEAADECDECEBDCBEDDEDECEEDEEEEDEDEEEDCCCACADBCEEDEDBEEBEE >ss_pred CCCCCHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCC >ss_conf 9747877854136238999878667939999777589899999999997692457898841886200165777069803999997799823033259 >Consensus xxmxxxxdiikxPiiTEKsxxlxexnxytFxVxxxatKxeIKxavexxfxVkVxxVnTxxxxgKxkRxxxxxGxxxxxKKAiVtLxxgxxxidxfgx >c5o60U_ ATITDPRDIILAPVISEKSYGLIEDNVYTFVVHPDSNKTQIKIAIEKIFDVKVDSVNTANRQGKRKRTRTGFGKRKSTKRAIVKLAAGSKPIDLFGA >UniRef50_P18664(2-85:90) Putative 50S ribosomal protein L23, chloroplastic n=5 Tax=core eudicotyledons RepID=RK232_SPIOL E=7e-17 s/c=1.05 id=29% cov=78% -------DGIKYAVFTDKSIQLLGKKQYTSNVESRSTRTEIKHWVELW---NSYEMNSHRLPGKGRRMGPIMGHTMHYRRMIITL------------ >UniRef50_C6V4D1(5-88:94) Ribosomal protein L23 n=2 Tax=Neorickettsia RepID=C6V4D1_NEORI E=1e-07 s/c=0.69 id=28% cov=85% ---------LIGPlVVTEKSCLLKDSlGKISIFAPVSATKKQVRSLFLERFkGIKILAVNSVLTCGKSKRFKGKSGKRSDKKKFILTIDGGSQ------- >UniRef50_A8J6R9(85-149:226) Mitochondrial ribosomal protein L23 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6R9_CHLRE E=5e-08 s/c=0.91 id=28% cov=63% ---------------------------VAFKTTPDVTKLEIAAFLQSVYGMNVERVSTINYLGRRRLAISRNGKRlwwreDDWKKAYVIFRP-------- -- >UniRef50_Q2H0M8(47-124:195) Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H0M8_CHAGB E=8e-06 s/c=0.66 id=29% cov=70% ----------------------------TFVVPLNFNKFDLRDYLYHAYNVEVTSVRSFINQpaPKQKFVGVGRMYRPRSQKmMIVELlkpfvwpaRPDD SELDQF-- >UniRef50_C5KBC3(29-97:239) Ribosomal protein L23, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KBC3_9ALVE E=1e-10 s/c=0.98 id=28% cov=70% -----------------RSGMYLEPNRIAFRVPVHLTKLEIREYLRKIYGVKAIRCTTVVRFPKVMKNRARAYYKNGaqFKKAIVT------------- >UniRef50_UPI000186E02B(44-110:155) mitochondrial 50S ribosomal protein L23, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E02B E=1e-06 s/c=0.80 id=26% cov=67% --------------------------QVLFQTSIQMTQYDIKNYLEKIYKIPVVEVKTTIKMGEIKKCfgRQHLIKDDDYKEALVTMPTDFK------- >UniRef50_Q012N9(171-251:259) RL23A_FRIAG 60S ribosomal protein L23A (ISS) n=1 Tax=Ostreococcus tauri RepID=Q012N9_OSTTA E=9e-16 s/c=1.04 id=28% cov=84% SSLNHSSQILKHPLANETALAKTEnNNTLVFIVDARANKRQIKEAVKRMYDIDCAKVNTLIRP-------------NGDKKAYCRLTADHDALD---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 811 * * * * * * * * * * * * * * 1217 * * * * 1 0 * * * * * * 1520 0 0 T 2 * * * * * * * * * * * * * * * 1217 811 * * * 2 0 * * * * * * 1520 0 0 I 3 * * * * * * * 3961 * 3821 209 * * * * * * * * * 3 0 * * * * * * 3619 0 0 T 4 3570 * * * * * * 2343 1840 * * 2229 * * 3964 4058 3293 * * * 4 0 * * * * * * 3753 0 0 D 5 * * 1022 5224 * * 5232 * 5019 * * 1973 5479 5007 * 4030 4214 * * * 5 0 * * * * * * 4337 0 0 P 6 3185 * 5148 * 5424 * 5228 3448 5187 2450 * * 1966 * * 3507 4927 3889 * 3933 6 35 5384 * 1000 1000 * * 4356 1000 0 R 7 * 5730 5390 5809 2305 * 4076 5599 5257 * * 4381 * 4558 4855 4508 4078 * * 1311 7 0 * * * * * * 4626 0 0 D 8 5903 * 999 3478 * 5891 * * 5039 * * 3194 * 2858 5781 3636 * * * * 8 31 * 5548 * * * * 4910 0 0 I 9 6114 * * 5740 4587 4853 * 1663 4088 2829 * * * 5423 * * 6191 1622 * 6207 9 0 * * * * 0 * 5094 0 1000 I 10 * * * * 5600 * * 920 * 1461 5200 * * * * * * 4048 * * 10 0 * * * * * * 5159 0 0 L 11 5962 * 6354 6135 * * 6057 2839 1201 3062 * * * 4766 3197 * 6664 3435 * * 11 0 * * * * * * 5159 0 0 A 12 3519 5164 * 4863 * 4621 3708 6064 2616 6350 5904 5743 * 4656 2885 3067 4288 * * 2625 12 0 * * * * * * 5159 0 0 P 13 3808 * * * 4675 5705 6188 4977 * * * * 469 5801 * 5085 * 4190 * * 13 43 5093 * 608 1540 * * 5226 1627 0 V 14 * * * * 6050 * 4087 2069 * 2241 5233 * * * 4920 5053 * 1717 5939 3920 14 0 * * * * * * 5229 0 0 I 15 5050 * * * 4183 * * 2002 5547 2146 * * 6305 6145 * 5397 3737 1853 * 6031 15 45 5013 * 0 * * * 5229 1970 0 S 16 * * * * * * * * * * * 4268 * * * 2645 343 * * * 16 14 6744 * 0 * * * 5229 1000 0 E 17 * * 2979 387 6129 5807 * * 5945 * * * 5337 5539 * * 6169 * * * 17 0 * * * * * * 5229 0 0 K 18 * * * 6697 * * * * 146 6579 * 6802 * * 4400 6875 6501 * * * 18 25 5866 * 0 * * * 5247 1000 0 S 19 1993 * 6782 * * 5103 * 6476 * * * 5142 * 6321 * 1279 2250 4793 * * 19 13 6772 * 0 * * * 5249 1000 0 Y 20 4686 6129 * 6345 5017 5308 * 2685 6348 3677 4009 3862 * 6358 * 3914 1948 3846 * 3405 20 52 4814 * 463 1866 * * 5249 2072 0 G 21 3524 * 4751 5006 5728 4343 * 6604 3249 4614 3151 3869 * 3087 2835 3878 4641 4505 6043 6135 21 18 6314 * 1000 1000 * * 5249 1000 0 L 22 4096 6943 * 5557 6393 6103 6135 3415 3861 1074 4385 6712 * 3568 6659 4537 * 5263 * 6228 22 15 6606 * 0 * * * 5249 1000 0 I 23 3749 * 5873 3700 * 4862 * 3798 4919 1848 3503 4795 5409 4794 3257 4146 4333 5649 * * 23 127 3571 * 2420 298 * * 5270 2706 0 E 24 5009 * 2924 752 * 4744 * * 3427 * * 5997 * 4696 * 5407 6378 5430 * * 24 211 2880 * 0 * * * 5270 3367 0 D 25 4661 * 3708 4501 * 6495 4996 5496 2235 5440 5462 2474 6258 2696 4889 3206 5181 * * * 25 309 2374 * 70 4390 * * 5270 3776 0 N 26 * * * 4922 * 2952 * * 2942 * * 783 5600 6969 4204 4522 * * * * 26 43 5104 * 2546 271 * * 5335 1922 0 V 27 6568 4586 * 6614 * * * 7201 1794 * * 6358 * 2005 3497 * 3047 2643 * 6432 27 0 * * * * * * 5584 0 0 Y 28 * * * * 5812 * * 2886 * 2918 5875 * * * * * * 2490 * 945 28 0 * * * * * * 5730 0 0 T 29 3148 5368 * 6343 * 5745 * 5938 5810 5086 6226 * 6890 4612 * 3373 1420 2131 * 7096 29 0 * * * * * * 5615 0 0 F 30 6266 * * * 282 * * 4723 * 4473 * * * * * 4689 * 4878 * 6779 30 0 * * * * * * 5632 0 0 V 31 6780 * 3737 3304 5569 * 5668 2674 2650 4717 6559 4346 * 3761 3756 5587 * 3432 6917 3464 31 0 * * * * * * 5632 0 0 V 32 3677 5102 * * * * * 4939 * 5168 * * * * * * 3762 399 * * 32 0 * * * * * * 5632 0 0 H 33 3113 * 1663 3958 5878 6559 5386 * 5264 5736 * 4147 2778 5786 4625 3181 6290 5375 * * 33 0 * * * * * * 5632 0 0 P 34 4826 6346 * 6784 * 5577 * 3738 2485 3117 4222 5380 2188 5120 3587 5212 5301 3439 * * 34 14 6678 * 1585 585 * * 5632 1000 0 D 35 5439 * 2652 3452 5570 4807 5035 * 2834 * * 2649 * 4681 2458 3871 5302 * 6780 5997 35 0 * * * * * * 5632 0 0 S 36 1142 * * * 4653 * * 5791 * 3143 3051 * 5494 * * 3765 5395 3095 * 5738 36 0 * * * * * * 5632 0 0 N 37 6637 * 4997 * * 5314 5052 * 6614 * * 1684 * * 5423 2660 1320 * * * 37 0 * * * * * * 5632 0 0 K 38 * * * * * * * * 158 * * * * 5661 3574 * * * * * 38 0 * * * * * * 5632 0 0 T 39 5143 * 5152 5106 4814 5871 4554 3578 4055 2925 * * 3156 4194 4394 4524 2184 5337 * 4603 39 0 * * * * * * 5632 0 0 Q 40 6373 * 2183 1382 * 5447 7323 * 5906 6066 5558 5524 * 2360 5509 5331 5524 7412 6505 * 40 0 * * * * * * 5632 0 0 I 41 4921 * * * 5344 * * 663 * 3756 4404 * * * * * 6436 2488 * * 41 0 * * * * * * 5632 0 0 K 42 4686 * * 5704 * 6663 * * 633 * 6652 * * 6638 2012 6783 * 6615 * * 42 0 * * * * * * 5632 0 0 I 43 3108 * 3789 2625 * * 4552 5754 2145 4944 * 4270 * 3732 3023 4926 4649 7182 * * 43 0 * * * * * * 5632 0 0 A 44 992 6630 7042 4055 5554 * * 5662 * 4011 5791 6270 * * 5494 5881 * 6595 4660 2349 44 0 * * * * * * 5632 0 0 I 45 * * * * 2857 6819 * 1915 * 2359 5267 * * * * * * 1446 * * 45 0 * * * * * * 5632 0 0 E 46 6875 5997 * 693 * * * 5755 2943 5393 * 5849 * 3946 5616 5899 4334 * * 5956 46 0 * * * * * * 5632 0 0 K 47 4406 * 5062 2950 6063 6689 4827 5710 2132 3998 5997 5716 * 3427 3514 3563 3424 6420 * 5707 47 0 * * * * * * 5632 0 0 I 48 3346 6505 * * 3997 * 5791 2215 5800 1623 4759 5774 * 5764 4318 * 6705 3712 5916 5278 48 24 * 5916 * * * * 5632 0 0 F 49 * 6245 * * 879 * * * * 4934 * * 5384 * * 6628 * * * 1410 49 41 5144 * 756 1294 * 0 5645 2028 1000 D 50 6076 * 2725 3906 * 1942 * * 2517 * * 2249 * 4380 4810 4706 * * * * 50 16 6547 * 0 * * 0 5645 1000 1000 V 51 6744 * * 5507 6462 * * 3102 5937 3707 6258 * * 7184 * 7313 6115 500 * * 51 0 * * * * 0 * 5645 0 1000 K 52 6228 * 3961 4262 * 5220 6450 * 1220 * * 3601 3494 5055 4123 4446 3347 * * * 52 0 * * * * * * 5632 0 0 V 53 6478 5823 * * * * * 3384 * * * * 3396 * * 5916 5635 427 * * 53 0 * * * * * * 5632 0 0 D 54 3503 * 3944 3161 * * * 3001 2906 2941 * 6373 * 5087 4951 4569 3518 2981 * 5916 54 0 * * * * * * 5632 0 0 S 55 3493 * 2779 4222 * 5125 5791 * 1812 * * 3986 * * 3270 2294 6705 * * * 55 0 * * * * * * 5632 0 0 V 56 * 4586 * * * * * 2343 * * 4473 * * * * * 6597 502 * * 56 0 * * * * * * 5632 0 0 N 57 6608 5532 * * * * 6630 * 4590 * * 713 * 5871 2261 5554 4302 * 6833 * 57 15 * 6599 * * * * 5632 0 0 T 58 6626 * * * * * * 3759 * 5689 6340 * * * * 2254 846 3081 * * 58 10 7190 * 0 * * 0 5668 1000 1000 A 59 5004 4797 * 5924 4348 * 3425 3341 * 2012 3666 * * 4127 4176 3865 4992 3246 * 5016 59 40 * 5207 * * * 0 5668 0 1000 N 60 6549 6850 * * * * 6319 1971 * 5182 5957 1531 * * 2696 6731 4823 3008 * * 60 46 * 4981 * * 1238 796 5621 0 1833 R 61 4726 6650 * 4918 6696 * * 4472 3955 3280 4372 4731 5161 3951 3589 5104 3313 2390 * 3121 61 11 * 7089 * * * 0 5612 0 2573 Q 62 4914 6134 4853 5659 5125 * * 6928 2359 4660 3334 * 1977 3362 3652 4194 5451 5694 * * 62 168 5780 3451 1000 1000 * 0 5608 1000 2703 G 63 5359 * * * * 887 * * 4821 6819 * 5187 2420 5197 3724 4030 6335 * * * 63 27 * 5731 * * * 0 5546 0 3354 K 64 4633 * 5743 4199 * 5345 6552 5708 526 * * * * 4772 3814 6231 5922 * * * 64 0 * * * * * 0 5538 0 3346 R 65 3562 5933 5428 5298 5441 5718 * 3254 2510 5554 * 4468 4585 4919 3099 3885 3227 3832 * 5306 65 31 5546 * 2346 316 * 0 5538 1647 3346 K 66 4659 * * * * 6175 6377 5016 796 * 6237 * * * 2478 4858 3545 * * 6090 66 139 3447 * 2069 393 * 0 5538 3239 3346 R 67 6450 * * * 5691 5842 * * 2706 6052 5341 * * 4193 623 6161 * 6100 6400 6143 67 70 4408 * 1000 1000 * 0 5532 2264 3346 T 68 3688 4649 6078 5966 2903 5912 6977 4310 3737 4204 3920 4121 * 4626 3500 4138 4494 3198 * 4287 68 104 3844 * 1171 847 3082 181 5532 2649 3346 R 69 * * * * 6325 1267 * 5340 2603 6571 6273 4618 * 6077 2140 5187 5281 * * 5401 69 29 * 5656 * * * 0 5546 0 3565 T 70 4392 * * * 4530 2754 6508 * 2331 6637 5737 4087 4541 4196 2753 3480 4529 4962 * 4249 70 73 4678 6592 1231 801 * 0 5538 2130 3369 G 71 5116 * 5954 * 3192 2672 5448 3240 4080 5240 4661 4032 * 6526 2936 4364 4650 3514 * 4151 71 99 4579 5336 1027 974 3221 164 5538 2025 3426 F 72 3911 * * 4338 4295 5947 * 3599 3292 2845 4676 4802 4171 6682 4177 3444 3402 4281 * 4066 72 62 4572 * 1977 423 2976 196 5525 2123 3559 G 73 5035 * * * * 486 6066 4853 6073 * 5647 6154 * * * * 5443 5101 4825 3843 73 71 4796 6355 2342 317 1963 428 5537 2039 3455 K 74 * * * * 4930 * 3913 6176 1622 6113 5469 6115 6555 4243 2338 4184 6388 5625 * 2624 74 0 * * * * 2801 223 5579 0 3117 R 75 6733 * 4633 5001 6138 * * * 2561 4206 * * 6011 6502 1578 5329 1941 5337 * 6698 75 59 4652 * 1404 685 491 1793 5596 2286 2944 K 76 3443 5953 4176 4764 * * * 5401 2167 * 5155 3689 2492 6205 4622 2922 4769 4400 * * 76 27 5752 * 1052 950 485 1807 5645 1673 1988 S 77 4032 * 2110 * 5566 2429 4068 * 4314 5347 * 3435 * 6823 2936 3492 5512 * * 5437 77 17 6397 * 1000 1000 * 0 5641 1000 1000 T 78 * * 5706 4681 3360 5711 * 5629 2918 4651 5562 6596 6631 * 4078 5336 4616 4529 2749 1864 78 0 * * * * 0 * 5641 0 1000 K 79 * * * * * * * * 156 * * 6635 * 5914 3725 * * * * * 79 0 * * * * * * 5649 0 0 R 80 * * * 5617 * * 6327 5150 489 4940 * * * * 2574 * * 5271 * * 80 24 5903 * 0 * * * 5649 1000 0 A 81 577 * * * 5339 * * 6076 * * 2652 * * * * * * 2930 * * 81 0 * * * * * * 5650 0 0 I 82 * * * 6606 3823 * * 1232 * 4376 * * * * * 6326 4487 3716 6602 1729 82 0 * * * * * * 5650 0 0 V 83 * 5998 * * 4224 * * 2008 * 4168 * * * * * * 5464 727 * * 83 0 * * * * * * 5650 0 0 K 84 * * 6527 4321 5905 * 6717 4666 3164 * * * * 4059 2838 3917 1154 4786 * 6617 84 0 * * * * * * 5650 0 0 L 85 * * * * 3586 * * 5399 * 411 3511 * * * * * * 4236 * * 85 95 5862 4416 3000 193 * * 5636 1000 0 A 86 2643 * 3838 4488 * 4953 6607 * 1984 6308 5337 6491 3245 5360 3084 3547 6753 5074 * 6755 86 0 * * * * 434 1944 5523 0 2469 A 87 3311 * 2850 2201 * 5497 * * 2716 5358 * 4898 2671 5963 5160 4628 4716 5000 * * 87 17 * 6427 * * * 0 5524 0 1000 G 88 * * 2340 3868 * 771 * * * * * 3222 6315 * * 6033 6281 * * * 88 119 6192 3936 0 * 674 1422 5348 1000 1385 S 89 * * 2096 3545 4772 4281 3668 * 4448 5930 * 4393 * 2481 * 4207 * 4131 * 3139 89 365 * 2162 * * 438 1932 5290 0 2829 K 90 5042 * 3067 2193 * * * * 1515 * * 4600 * 4780 6180 2540 5773 * * * 90 351 * 2211 * * 81 4199 5117 0 3788 P 91 1923 * * 5428 3942 * * 2395 * 5694 * * 4008 5739 * 2533 2568 5951 * * 91 0 * * * * 0 * 5131 0 3335 I 92 5003 * * 5041 * * * 618 * 3137 5121 * 5632 5847 5788 5957 5532 4293 * * 92 28 5707 * 1000 1000 * * 4970 1000 0 D 93 5076 * 908 3124 * * * * 5773 4656 * 4027 2840 4532 * 5588 * * * * 93 0 * * * * * * 4970 0 0 L 94 * * * * 1544 * * 2151 * 1420 5987 * * 5321 * * * 5843 * * 94 0 * * * * * * 4902 0 0 F 95 5186 * * 3239 434 * * * * 5223 * * * * * * * 5294 * 3751 95 0 * * * * * * 4677 0 0 G 96 * * * 3203 * 166 * * * * * * * * * * * * * * 96 0 * * * * * * 2849 0 0 A 97 0 * * * * * * * * * * * * * * * * * * * 97 0 * * 0 * * * 1516 0 0 //