HHsearch 1.5 NAME c5nrmB_ FAM FILE c5nrmB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5nrmB_.a3m DATE Sat Feb 3 08:17:53 2018 LENG 66 match states, 66 columns in multiple alignment FILT 107 out of 510 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.5475 3.4144 SEQ >ss_dssp CTTCTTCSSSCCHHHHHHHHHHHTTSCSSCSSSCHHHHHCSSSSSCCCHHHHHHHHHHHTTSCSCC >sa_dssp EDABACEEEDCCEEACDCADDCCDDECEEBEBEDCDDAACBDEDEDBDDDACDCAEDCDEEECEED >ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC >ss_conf 988677887312999999999970477667683346550545895765999999999963200259 >Consensus kxGDvNxDGxvxxxDxxxxxxxlxxxxxxxxxxxxxxxaDvnxDGxIdxxDxxxixxxixGxixxf >c5nrmB_ KPGDVDGNGSINSIDFALMRNYLLGNLKDFPAEDDIKAGDLNGDKSININDFAIMRMYLLGMITKF >UniRef50_B9ZGN3(498-558:1710) Peptidase S8 and S53 subtilisin kexin sedolisin n=3 Tax=Natrialba magadii ATCC 43099 RepID=B9ZGN3_NATMA E=8e-06 s/c=0.84 id=25% cov=92% --GDVDQDGDVTVQDVQLTQQYL---QDMDPEPFAEDLADMDRDGEVTTDDLSLLQQKVQGMLDE- >UniRef50_UPI0001C37D47(511-565:567) ChW repeat-/cell adhesion domain-containing transglutaminase-like protease n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D47 E=0.0001 s/c=0.87 id=27% cov=83% --GDLNCDGEVNVADLVYCANTVLGKIDPVHS------CDANNDKQTDVFDVIFMRKLVIKL---- >UniRef50_Q9L3K3(431-493:792) Endoxylanase n=4 Tax=Bacteria RepID=Q9L3K3_RUMFL E=4e-12 s/c=1.15 id=27% cov=97% -RGDVNEDGVIDSLDMIALRRGIIKIMSGG--GIAPPNSDINGDGDVSVADLVALKRFILGIDKKF >UniRef50_Q0TRJ3(1105-1162:1965) Glycosyl hydrolase, family 31/fibronectin type III domain protein n=7 Tax=Clostridium perfringens RepID=Q0TRJ3_CLOP1 E=0.0002 s/c=0.81 id=27% cov=89% --GDWNNSGSIEEGDLVFLENY-AGLTTADSDWGYVSMADLNNNGLIDAYDISYVSSKLEG----- >UniRef50_D1JHK2(38-95:359) Putative ABC transporter, solute binding protein n=3 Tax=uncultured archaeon RepID=D1JHK2_9ARCH E=0.0004 s/c=0.79 id=20% cov=83% --GNANEDDTIDMRDLTYVKLIFFGKKPET------ELADAKYDGKINPLDFIQIKLIIVGK---- >UniRef50_B8FK48(239-302:812) Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK48_DESAA E=9e-06 s/c=0.80 id=25% cov=97% --GDLDDNGLVQAKDANIALQILGGLSPADLvNDISDPAADTNGDGKFNLMDALYILRSVHGIVSS- >UniRef50_UPI0001C37BE8(832-890:890) N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37BE8 E=3e-05 s/c=0.84 id=27% cov=89% --GDVDLNGKFELNDAVILQHWLLTGKDEKLKS--WEMGNFIPDNSLDVFDLTVMKRELLKQ---- >UniRef50_UPI0001C373EE(605-665:873) cell surface protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373EE E=2e-07 s/c=0.93 id=24% cov=89% KKGDVTNDNVIDGRDATAVLTYYAQTSTgqsGSFNEYQKQAAEVNDDNVIDGRDATLLLTY-------- >UniRef50_Q53317(437-510:802) Endo-beta-1,3-1,4 glucanase n=4 Tax=Bacteria RepID=XYND_RUMFL E=6e-10 s/c=0.88 id=21% cov=100% KWGDANCDGGVDLSDAIFIMQFLANPNKYgltgtetnHMTNQGKVNGDVCEHGSgLTEDDAVSIQKYLIRAISE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 214 * * * * 2858 * * * * * * 1 0 * * * * * * 4175 0 0 P 2 4990 * * * 4914 * 5154 3461 3289 4043 * * 1762 * 2556 * * * 4230 2887 2 0 * * * * * * 4959 0 0 G 3 * * * * * 25 * * * * * * * * * 5846 * * * * 3 0 * * * * * * 6341 0 0 D 4 * * 37 * * * * * * * * 5295 * * * * * * * * 4 0 * * * * * * 6686 0 0 V 5 2591 6566 * * 6469 * * 2192 * 2627 * * * * * 5039 * 1367 * 6231 5 0 * * * * * * 6687 0 0 D 6 * * 2180 * * * * * * * * 547 * * * 6027 3654 * * * 6 0 * * * * * * 6687 0 0 G 7 4378 4033 4344 4484 4229 1314 * * 4293 3808 6522 3879 * 6638 4795 4186 6829 * * 5047 7 0 * * * * * * 6687 0 0 N 8 * * 286 6257 * 6379 * * * * 5672 3011 * * * 6498 * * * * 8 0 * * * * * * 6691 0 0 G 9 5554 6455 5128 * 7088 513 * * 5367 * 5452 3577 * 5164 5699 4452 7134 * * * 9 0 * * * * * * 6691 0 0 S 10 4268 5966 4331 3905 * 5586 * 2929 3113 3962 5503 3991 * 5719 3750 3164 4169 2853 * * 10 0 * * * * * * 6691 0 0 I 11 4302 6139 * * 4668 * * 1466 * 3886 * * * * * * 5326 1215 * 6600 11 0 * * * * * * 6691 0 0 N 12 5909 * 1418 5401 * 6570 * * * * * 1584 * 6590 6396 4070 2648 * * * 12 12 * 6871 * * * * 6691 0 0 S 13 2872 * * 5012 3936 3269 * 2690 * 3824 3534 6960 * 5035 * 2995 5338 2619 * * 13 0 * * * * 0 * 6690 0 1000 I 14 3528 * 4463 6942 4696 3346 6606 3640 4243 3093 5899 3926 * 3431 3491 3235 4403 5499 * 5470 14 0 * * * * * * 6691 0 0 D 15 * * 29 * * * * * * * * * * * * * 5672 * * * 15 0 * * * * * * 6691 0 0 F 16 1898 6009 * * 3801 5893 * 3380 * 2190 5032 * * 5746 6708 6814 5887 2454 * 4465 16 28 * 5718 * * * * 6691 0 0 A 17 2851 * 4971 5686 * 6267 * 3249 * 3808 4403 5047 * 4766 4536 3528 2774 2212 * 6118 17 22 7208 6854 0 * * 0 6671 1000 1656 L 18 3654 6552 * 7178 4395 6476 * 2722 4682 1877 3610 * 6421 6091 4549 3903 4743 3642 * 4434 18 48 * 4920 * * * 0 6668 0 1999 M 19 3327 * * * 3709 6461 * 2555 * 2021 3056 6808 * * * 6403 4660 2298 * 6379 19 32 6518 6464 3170 170 * 0 6648 1000 2940 R 20 3929 6730 6705 5308 5957 5278 * 4509 3238 2463 4716 3533 * 3230 2799 3981 6223 4261 * 6224 20 33 * 5448 * * 1784 495 6632 0 2890 N 21 5070 * 4435 5045 * 6891 6040 6900 2212 4458 6183 2939 * 2474 2698 4034 4033 * * * 21 26 * 5807 * * 1826 478 6637 0 3059 Y 22 3423 * 5032 5776 4128 4643 2735 3856 * 5020 6379 * * 6819 5672 4773 4729 * 4032 1579 22 80 5742 4821 1585 585 2372 310 6643 1657 2962 L 23 3729 6449 * * 4546 * 6115 2000 * 1479 6232 * * * * 5408 5408 3508 * 3339 23 104 5696 4318 741 1316 729 1334 6628 1634 3665 L 24 3025 4563 6632 * 4434 4008 4715 3156 6354 1721 5554 4019 * * 5808 3855 4769 4957 * 6418 24 43 * 5091 * * 402 2039 6628 0 3545 G 25 3739 * 3803 4668 6846 1417 6563 * 3579 4987 * 2928 * 5183 4563 4724 4247 * * 6221 25 107 7052 3965 4322 74 666 1435 6667 1000 2724 N 26 3447 * 6494 4272 * 4009 * 4190 3035 4279 6830 2917 3548 3393 4860 4049 4251 6672 5123 4402 26 29 * 5659 * * 1426 672 6686 0 3717 L 27 3637 * 4524 5758 5701 3524 * 3279 2931 3713 4528 5349 5071 6570 6422 2473 3421 4855 * 6224 27 66 6080 5057 1311 744 486 1807 6683 1534 3384 K 28 5189 * 2585 2813 * 3848 * 6506 3822 6343 5505 4101 4198 5965 5291 2727 2969 4861 * 6554 28 210 5037 3253 2083 388 1266 775 6658 1838 2743 D 29 4292 * 3215 3439 4998 3133 * 4715 5458 4841 6368 3503 4160 5156 5298 3383 3379 * 5317 3621 29 139 4990 4051 2837 218 2037 403 6663 2107 3889 F 30 6323 * 3009 4778 3105 4611 6156 3238 4133 2998 5433 5076 4453 4637 * 3470 4664 4523 6447 4499 30 35 * 5367 * * 690 1396 6631 0 4494 P 31 3459 * 5430 6483 4935 4310 * 4306 5772 1824 4871 5035 2262 5231 * 4372 4829 5442 5335 6758 31 55 6449 5281 0 * 1299 753 6634 1000 3527 A 32 4012 * 2834 4993 4511 4802 * 4547 3848 6564 * 2786 5357 6560 * 3049 2380 4701 * 4948 32 70 6335 4850 1000 1000 2405 302 6627 1000 3073 E 33 3156 * 3011 2679 5774 2808 6287 * 4281 * 6826 3326 4255 4412 4799 4158 4406 * 4821 * 33 104 5301 4510 1271 772 * 0 6626 1741 3757 D 34 4166 6235 3006 2956 4284 4868 5668 3686 6558 4723 5355 4120 * 3344 4800 4947 4196 5015 * 3158 34 47 * 4959 * * 1711 526 6552 0 4274 D 35 2827 * 4301 5283 4161 2407 * 4756 5692 5559 * 4060 5314 2697 6118 4894 4431 5532 5549 3575 35 94 4988 4986 1633 562 1890 453 6584 2220 3936 I 36 4171 * 4793 5576 3875 * * 3672 3308 2269 4096 4841 6778 6735 * 4130 4401 2911 4524 4653 36 72 * 4353 * * 2054 397 6610 0 3842 K 37 4940 * 4884 2926 5268 5463 * 4152 2051 4504 4516 6795 4279 4937 4633 4206 4716 3798 4935 4727 37 29 5652 * 2375 309 1631 562 6588 1598 4157 A 38 1391 5921 6698 5631 * 6516 5645 5373 4988 2977 6015 2998 * 6361 5212 5054 4251 4952 * 3966 38 18 6349 * 2000 415 546 1667 6611 1000 3579 G 39 719 5499 * * 4033 2393 * * * 6184 6252 * * * * 4774 * 7029 * 4385 39 13 6804 * 3459 138 0 * 6653 1000 1963 D 40 * * 99 5246 * * * * * * * 4634 * * * * * * * * 40 12 6871 * 1000 1000 * * 6691 1000 0 L 41 3439 5343 * * 4091 * * 2465 * 2834 3617 * * * 6551 * 4996 1456 * 6048 41 63 4557 * 2682 244 * * 6691 2456 0 N 42 * 5529 2043 5885 * * 6442 5382 4893 6039 * 855 * 5977 * * 4252 * * 6239 42 30 5603 * 1378 701 * * 6691 1584 0 G 43 4457 6474 5034 4992 6551 1409 * * 3387 6005 * 4871 4944 3119 3611 3587 * * * 4797 43 34 5435 * 1122 887 * * 6691 1616 0 D 44 * * 548 6442 * 6239 5485 * * * * 2116 * * * 4699 * * * * 44 0 * * * * * * 6691 0 0 K 45 6239 * 4232 5589 * 574 6931 * 5391 * * 2885 * 6139 * 4702 6529 * * 6589 45 12 6876 * 3000 193 * * 6691 1000 0 S 46 4465 * 4474 3831 5713 5266 * 3975 2596 4490 6651 5699 * 4519 3676 3875 4020 2207 * 5415 46 35 5389 * 0 * * * 6691 1672 0 I 47 5838 6257 * * 4571 * * 1203 * 3581 * * * * * * 5796 1413 * 5966 47 0 * * * * * * 6691 0 0 N 48 * * 1186 4263 * 6523 * * * * * 1813 * * 6396 4768 2604 * * * 48 11 * 7091 * * * * 6691 0 0 I 49 2834 * * 5511 5029 3308 * 2544 6875 4680 4529 * 5540 5692 6284 2924 3832 2410 * * 49 0 * * * * 0 * 6697 0 1000 N 50 2650 * 3955 4401 3388 4482 * 3992 3787 3224 5211 4096 * 6291 3502 4827 3947 5564 * 4696 50 0 * * * * * * 6691 0 0 D 51 * * 0 * * * * * * * * * * * * * * * * * 51 10 * 7172 * * * * 6691 0 0 F 52 1865 6015 * * 3467 * * 4027 6509 1822 4681 * * 6085 5691 4723 * 3282 * 4303 52 0 * * * * * 0 6713 0 1000 A 53 3505 * 4868 5370 * * * 3106 * 3257 4567 4981 * 5328 4221 2999 2537 2797 * 4678 53 0 * * * * * 0 6713 0 1000 I 54 3436 * * 5472 5618 5987 5844 3398 4791 1881 3873 * * 3853 5187 5416 5717 3598 5074 3190 54 0 * * * * * 0 6713 0 1000 M 55 * * * * * * * 1638 * 1269 3513 * * * * * * 2505 * * 55 0 * * * * * 0 6713 0 1000 R 56 4075 6016 5629 4558 6082 4930 * 3903 2519 2203 4819 4785 * 2954 3637 3993 6328 * * * 56 0 * * * * * 0 6639 0 1000 M 57 6328 * 4634 5509 * 6381 * * 2194 4989 4818 3548 * 2711 1950 3877 4378 6096 * * 57 0 * * * * * 0 6639 0 1000 Y 58 5678 * 6175 4701 3001 * 4453 4453 3208 5590 6533 5025 * 4349 5650 4612 6443 6458 * 1291 58 0 * * * * 0 * 6639 0 1000 L 59 3966 6265 * * 6244 * * 1571 * 1431 6468 * * * * 6740 * 2459 * * 59 0 * * * * * * 6319 0 0 L 60 5208 4965 4682 * 4962 * 6015 3195 5167 1298 5091 6018 * 6051 * 3724 3960 3360 6204 * 60 0 * * * * * * 6144 0 0 G 61 6212 * * 5842 * 450 4836 * 3398 * * 4424 * * 4043 * * * * * 61 0 * * * * * * 6156 0 0 M 62 4579 * * 4551 6095 5250 * 3073 2797 2583 4013 5210 * 3491 2959 3886 4307 5615 * * 62 0 * * * * * * 6101 0 0 I 63 4943 * 5391 5349 * * * 790 5282 5260 5293 * * * 4109 * 5465 2604 * 5753 63 0 * * * * * * 5580 0 0 T 64 * * 2559 3583 * * * 5426 3206 * * 3616 5418 5211 * 2408 1893 5296 * * 64 0 * * * * * * 5532 0 0 K 65 * * 4293 1657 * * 4850 4689 2545 * * * * 4945 * 1619 5111 * * * 65 0 * * * * * * 5240 0 0 F 66 * * * * 93 * * * * * * * * * * * * * * 3998 66 0 * * 0 * * * 4306 0 0 //