HHsearch 1.5 NAME c5mqfR_ FAM FILE c5mqfR_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5mqfR_.a3m DATE Sat Mar 25 08:53:43 2017 LENG 98 match states, 98 columns in multiple alignment FILT 41 out of 45 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4243 -0.1180 SEQ >ss_dssp CCCCCCCCCTTCSCCCCSCCCCCTTTCCHHHHHSCCHHHHHHHHHHHHTTCCCCCHHHHTCSSCCCSCSCCTTSCSSCCCSCCSSTTHHHHHHHHHCC >sa_dssp EEDEEDDDEEDDDEEDEDEDDCCEEDDCEDCDDECDCDCCDCCCCCEEECDDEEDCDDDDDEDDEEEDEEDEDDCEDCEDEDEECDDDCCCCCDDDDE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >ss_conf 91677765543332221356666421126776448999999999999630311068998705710458998744566623312330899999998609 >Consensus xsxlsxqxsxrdxxxhtKiKxrqxxQxxxeExxxrdxxxEleexExaxxxekxKRrWxddxvFkNqaxxxxxxxxxxxfiNDxlRsdfHkkFmxkyIk >c5mqfR_ LSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK >UniRef50_B0E0Y1(21-94:249) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0E0Y1_LACBS E=0.001 s/c=0.60 id=36% cov=77% ----SRQFSVRDMAAHTKLKFRQVGQTSAGEVKTRDLRAELLAAEHEAKNKKRKAEGKPPLAVEDSAAPVVDEEANKR-------------------- >UniRef50_Q5CW20(150-213:214) Shares a domain with a conserved HREF motif with the CWF15 protein that is involved in mRNA splicing n=2 Tax=Cryptosporidium RepID=Q5CW20_CRYPV E=0.0009 s/c=0.70 id=45% cov=43% -----------------------------------------------------KKRWTEDTVFRNQNRVS---QPKKRFINDILHSDQHREFMRKYI- >UniRef50_P78794(176-264:265) Pre-mRNA-splicing factor cwc15 n=2 Tax=Schizosaccharomyces RepID=CWC15_SCHPO E=2e-13 s/c=0.87 id=48% cov=82% -----------------NIKQERKREQMLQEEKNRALEQEKREREIAFGNEllnkassgsfQVKRRWDEDVVFRNTHKGVDDTPRPG-FVNDMLRSEFHK KFLARFV- >UniRef50_Q4P609(80-161:315) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P609_USTMA E=2e-08 s/c=0.74 id=42% cov=46% -AHLSQQRSVLSIPQHTKLKLRRPALSSAEGVaathaagTRRDLKRELEHAE------------------------------------------------ ----- >UniRef50_A2ENV4(141-184:185) Cell cycle control protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2ENV4_TRIVA E=4e-06 s/c=1.20 id=34% cov=42% --------------------------------------------------------WRDETVFRNQQMNAPQQ--TNDHINDPVRNEYHKRFMRRFVR >UniRef50_Q4XLB6(210-259:260) Cell cycle control protein cwf15 homologue, putative n=1 Tax=Plasmodium chabaudi RepID=Q4XLB6_PLACH E=1e-08 s/c=1.22 id=38% cov=51% ---------------------------------------------EEFEKQQKKRKWTDEAIFRNT---CEKKPKTNTFINDTVRTAFHKKFLFKYI- >UniRef50_A8PX18(153-240:277) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PX18_MALGO E=3e-05 s/c=0.56 id=41% cov=33% -------------------------------------------------------RWDDDLIFRNQASNTGNDLSKRGFVNDLTRT------------ >UniRef50_Q6BP48(142-226:226) Pre-mRNA-splicing factor CWC15 n=2 Tax=Debaryomyces hansenii RepID=CWC15_DEBHA E=0.0006 s/c=0.53 id=39% cov=47% ---------------------------------------------------KIKKSWRDSTAFKKQNSQNKNDDET--FTNDTLNSEFHQNFLTKYIR >UniRef50_C4QVQ9(136-205:205) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QVQ9_PICPG E=1e-08 s/c=0.87 id=32% cov=61% --------------------------------------KKMEEIETEMRTIPQKRSWRNST-FRNTNSKKTTTDKKSSYTNDTLKTDYHQKFMDKFIK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1576 0 0 S 2 1994 * * * * * * * * * * * * * * 417 * * * * 2 0 * * * * * * 1994 0 0 Q 3 1146 * * * * * 1994 * * * * * * 1751 * * * * * * 3 0 * * * * * * 1994 0 0 L 4 * * * * * * * * * 194 2991 * * * * * * * * * 4 0 * * * * * * 1994 0 0 S 5 * * * * * * * * * * * * * * * 134 3497 * * * 5 0 * * * * * * 2147 0 0 K 6 * * * * * * * * 800 * * * * 2626 1924 * * * * * 6 0 * * * * * * 2147 0 0 Q 7 * * * * * * * * 3327 * * * * 151 * * * * * * 7 0 * * * * * * 2147 0 0 Y 8 * * * * 1924 * * * * * * * * * 2626 * * * * 800 8 0 * * * * * * 2147 0 0 S 9 * * * * * * * * * * * * * * * 0 * * * * 9 0 * * * * * * 2147 0 0 S 10 3400 * * * * * * * * * * * * * * 1055 * 1238 * * 10 0 * * * * * * 2147 0 0 R 11 * * * * * * * * * 2626 * * * * 255 * * * * * 11 0 * * * * * * 2147 0 0 D 12 * * 255 * * * * * * * * * * * * 2626 * * * * 12 0 * * * * * * 2147 0 0 L 13 * * * * * * * 2626 * 800 1924 * * * * * * * * * 13 0 * * * * * * 2147 0 0 P 14 1924 * * * * * * * * * * * 441 * * * * * * * 14 0 * * * * * * 2147 0 0 S 15 1488 * * * * 3967 * * * * * * * 2626 * 1260 * * * * 15 0 * * * * * * 2147 0 0 H 16 * * * * * * 0 * * * * * * * * * * * * * 16 0 * * * * * * 2147 0 0 T 17 * * * * * * * * * * * * * * * * 0 * * * 17 0 * * * * * * 2147 0 0 K 18 * * * * * * * * 402 * * 2986 * * * 3096 * * * * 18 0 * * * * * * 3209 0 0 I 19 * * * * * * * 992 * 1008 * * * * * * * * * * 19 0 * * * * * * 3209 0 0 K 20 * * * * * * * * 0 * * * * * * * * * * * 20 0 * * * * * * 3209 0 0 Y 21 * * * * 2482 * * * 3254 2638 * * * 2155 * 3096 * * * 2224 21 0 * * * * * * 3209 0 0 R 22 * * * 1603 * * * * * * * * * * 576 * * * * * 22 0 * * * * * * 3209 0 0 Q 23 * * * 2665 * * * * * * * * * 1221 1274 * * * * * 23 0 * * * * * * 3209 0 0 T 24 * * * 3708 * * * * 2986 3254 * * 2739 3347 3096 * 2224 3140 * * 24 0 * * * * * * 3209 0 0 T 25 1800 * * * * 1275 * * * * * * * * 2986 * 2528 * * * 25 0 * * * * * * 3209 0 0 Q 26 * * * 2986 * * * * * 3571 * * * 341 * * * * * * 26 0 * * * * * * 3209 0 0 D 27 * * 2528 * * 2094 * * 2300 * * * * 2986 * 3571 2482 * * * 27 0 * * * * * * 3209 0 0 A 28 3204 * * 2300 * * * * * * 2986 * * * 3708 1926 2665 3948 * * 28 0 * * * * * * 3209 0 0 P 29 2772 * * * * * * * 2300 2986 * * 2001 * * 4619 * 2097 * * 29 0 * * * * * * 3209 0 0 E 30 * * 2215 746 * 4006 * * * * * * * 2986 * * * * * * 30 0 * * * * * * 3209 0 0 E 31 * * 2370 469 * 3571 * * * * * * * * * * * * * * 31 0 * * * * * * 3209 0 0 V 32 * * * 2986 * 3948 * 3708 * 2572 * 4619 * * 2300 * * 1641 * * 32 127 3571 * 2807 222 * * 3209 1000 0 R 33 * * * 2300 * * 3948 * 2061 * * * * 3708 2744 4082 3571 3017 * * 33 0 * * * * * * 3209 0 0 N 34 * * * * * 2370 * * 3098 * * 1555 * * 1800 * 4006 * * * 34 0 * * * * * * 3209 0 0 R 35 3254 * * 3347 * * 3948 * 2370 * * * * * 893 * * * * * 35 0 * * * * * * 3209 0 0 D 36 1603 * 576 * * * * * * * * * * * * * * * * * 36 0 * * * * * * 3209 0 0 F 37 * * * * 1295 * * * 3254 1361 * * * 3347 * * * * * * 37 0 * * * * * * 3209 0 0 R 38 * * * 1577 * * * * 1767 * * * * * 1431 * * * * * 38 103 3859 * 6129 21 * * 3193 1000 0 R 39 2016 * * 3258 * * * * 3451 * * * * 2161 1586 * * * * * 39 0 * * * * * * 3220 0 0 E 40 3719 * 3944 267 * * * * 5170 * * * * * * * * * * * 40 0 * * * * * * 3220 0 0 L 41 * * * * * * * * 2993 635 5170 * * 2304 * * * * * * 41 0 * * * * * * 3220 0 0 E 42 * * * 1030 * * * * * 2457 * * * * 1608 * * * * * 42 0 * * * * * * 3220 0 0 E 43 3093 * * 583 * * 3555 * 3939 3944 * * * * * * * * * * 43 0 * * * * * * 3220 0 0 R 44 1904 * * * * * * 3427 3719 * * * * * 1468 * * 3258 * 3351 44 0 * * * * * * 3220 0 0 E 45 * * 3246 288 * * * * 4601 * * * * 4871 * * * * * * 45 0 * * * * * * 2870 0 0 R 46 * * * 3409 * 3365 4005 2573 2589 * * * * 2292 3337 * 3196 * * * 46 0 * * * * * * 4138 0 0 A 47 1231 * * 1425 * * * * * * * * * * 2311 * * * * * 47 0 * * * * * * 4138 0 0 A 48 1453 * * * 2820 * * 3365 * 3259 3196 * * * 2456 * * * * * 48 0 * * * * * * 4138 0 0 A 49 1776 * * 3409 * 1988 * * 4005 * 4466 * * * 2668 3365 * * * * 49 0 * * * * * * 4138 0 0 R 50 * * * 2272 * * * * 3409 * * 1859 * 3259 2991 3575 3196 * * * 50 0 * * * * * * 4138 0 0 E 51 3575 * * 1559 * * * 3196 1984 * * * 3052 3409 * * * * * * 51 571 1613 * 4962 47 * * 4138 1986 0 K 52 * * * * * * * * 591 * * 3174 3679 2762 * * * * * * 52 0 * * * * * * 3167 0 0 N 53 * * * * * * * 2371 4241 * 4799 3086 * 3679 2148 3580 * 2232 * * 53 0 * * * * * * 3167 0 0 R 54 * * * * * 6582 * * 116 * * * * 5007 4800 * * * * * 54 0 * * * * * * 3959 0 0 R 55 2510 * 6021 * * * * * 2101 * * * * * 796 * * * * * 55 0 * * * * * * 3959 0 0 R 56 * * * 2961 * * * * 2122 * * 5035 * * 1025 3060 * * * * 56 0 * * * * * * 3392 0 0 W 57 * * * * * 3211 * * * * * * * * * * * * 165 * 57 0 * * * * * * 3074 0 0 D 58 * * 1376 * 3831 * * * 3211 * * 4250 * * 2698 * 2575 * * 4013 58 0 * * * * * * 3074 0 0 D 59 * * 631 2671 * * 4916 * * * * 4148 3211 * * * * * * * 59 0 * * * * * * 3074 0 0 D 60 * * 622 3387 * * * * * * * * 3211 * * 2770 * * * * 60 0 * * * * * * 3074 0 0 V 61 3898 * * * * 4618 * * * 2467 * * * * * 5080 1882 1285 * * 61 84 * 4148 * * * * 3074 0 0 V 62 2470 * * * * * * 1898 * * * * * * * * * 859 * * 62 0 * * * * 0 * 3092 0 1000 F 63 * * * * 158 * * * * * * * * * * * * 3266 * * 63 0 * * * * * * 3179 0 0 K 64 * * * 3266 * * * * 888 * * * * * 1597 5317 * * * * 64 0 * * * * * * 3179 0 0 N 65 * * 4128 * * * * * 4079 * * 178 * * * * * * * * 65 0 * * * * * * 3179 0 0 C 66 4419 3399 * * * * * * * * * * * 624 * 4128 2715 * * * 66 123 4419 4826 1000 1000 * * 3179 1000 0 A 67 799 4538 * * * * 5174 * * * * 2629 * 4504 * 3124 4867 * * * 67 115 * 3703 * * * 0 3146 0 1000 K 68 3246 * * * * * * * 2150 * 3014 * * * 1514 2670 4712 * * * 68 308 * 2378 * * 1318 740 3098 0 1547 G 69 5037 * * * * 1808 * * 2983 * * 2054 3739 3909 * 4182 3654 4617 * * 69 112 * 3748 * * 2016 410 3415 0 2115 V 70 3183 4566 3720 3265 * * * * 3811 * * 3934 4939 2790 * 3158 4043 2465 * * 70 97 * 3939 * * 1293 757 3517 0 2095 D 71 * * 2207 4044 * 4825 * * 2543 4836 * * 2485 * 4144 4965 3071 3399 * * 71 67 * 4467 * * 298 2423 3535 0 1989 D 72 * * 1465 2116 * * * * 3791 * * 2400 * 3601 * * 3990 * * * 72 132 * 3518 * * * 0 3156 0 1531 Q 73 3557 * 3255 2297 * * * * 2672 * 5575 * 3579 3046 5411 * 3023 3688 * * 73 121 5054 4305 0 * 178 3103 3617 1000 1845 K 74 * * 3075 3209 * * 4231 * 1444 5357 * 5597 3260 3725 4751 4352 * 4600 * * 74 30 * 5597 * * 1000 1000 3041 0 1526 K 75 2997 * * 3518 * 4535 * * 1425 * * 4353 3963 5046 4473 4115 5637 3239 * * 75 86 * 4108 * * 1000 1000 3041 0 1464 D 76 4806 * 4795 4725 * 4151 * * 1237 * * 4094 3797 4172 * 4434 2494 * * * 76 91 * 4038 * * 610 1535 3170 0 1541 K 77 * * 4829 * * 3318 * * 1252 * * 3638 3486 5094 3068 3719 4302 * * * 77 42 * 5133 * * 1000 1000 3095 0 1472 R 78 * * 3843 3613 * 4373 4436 * 5399 * * * * 4247 1124 2461 4739 * * * 78 0 * * * * 0 * 3095 0 1612 F 79 * * * * 332 * 4494 * * * * * * * * * * * * 2631 79 0 * * * * * * 2946 0 0 V 80 * * * * * * * 900 * * * * * * * * 2948 1580 * * 80 0 * * * * * * 2946 0 0 N 81 * * * * * * * * * * * 0 * * * * * * * * 81 0 * * * * * * 2946 0 0 D 82 * * 0 * * * * * * * * * * * * * * * * * 82 0 * * * * * * 2946 0 0 T 83 3866 * * * * * * 4558 * 2087 4977 4948 3895 * * 5228 1013 * * * 83 0 * * * * * * 2946 0 0 L 84 * * * * * * * 2998 * 1065 * * * * * * 2737 2018 * * 84 0 * * * * * * 2946 0 0 R 85 * * * * * * 4558 * 4051 * * 3851 * * 272 * * * * * 85 0 * * * * * * 2946 0 0 S 86 * * * * * * * * * * * 2210 * * * 773 2331 * * * 86 0 * * * * * * 2946 0 0 E 87 3813 * 867 1393 * * * * * * * * * * * * * * * * 87 0 * * * * * * 2839 0 0 F 88 * * * * 372 * * * * * * 4463 * 4546 * * * * * 2844 88 0 * * * * * * 2839 0 0 H 89 4543 * * * * * 63 * * * * * * * * * * * * * 89 0 * * * * * * 2839 0 0 K 90 * * * * * * * * 860 * * * * 2582 1826 * * * * * 90 0 * * * * * * 2839 0 0 K 91 * * * 4546 * * * * 616 * * 3827 * 3749 2647 * * * * * 91 0 * * * * * * 2839 0 0 F 92 * * * * 0 * * * * * * * * * * * * * * * 92 0 * * * * * * 2839 0 0 M 93 * * * * * * * * * 1187 834 * * * * * * * * * 93 0 * * * * * * 2839 0 0 E 94 3559 * 2843 3736 3794 * 5309 * 3507 * * 2759 * 5353 3530 2833 3822 * * 4452 94 0 * * * * * * 2845 0 0 K 95 * * * 4452 * * * * 458 * * * * * 2143 * * * * * 95 0 * * * * * * 2845 0 0 Y 96 * * * * 1811 * * * * * * * * * * * * * * 484 96 0 * * * * * * 2845 0 0 I 97 * * * * * * * 423 * * 3390 * * * * * * 2654 * * 97 0 * * * * * * 2845 0 0 K 98 * * * * * * * * 704 * * * * 3540 1735 * * * * * 98 0 * * 0 * * * 2807 0 0 //