HHsearch 1.5 NAME c5mlc9_ FAM FILE c5mlc9_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5mlc9_.a3m DATE Thu Feb 9 13:48:00 2017 LENG 107 match states, 107 columns in multiple alignment FILT 104 out of 161 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.2 EVD 0.4071 -1.5597 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHTHHHHHHHHHHH HHHHHCC >sa_dssp EECDDEBDEDBDEBBEEADECBEECEEEEEDDEDCDEDBDECBDEBCDDBDDBCEDADECBEECDEEEECDEEDCEECDDDBDECACDCCEDBDEBCEEB DDDCEEE >ss_pred CHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHCC >ss_conf 9223554202576543333478800069999999999999999999999999999999999987533899989999999999999999999999999999 9997339 >Consensus xxxxxxxxxxxxxxxxxxrxxfxxxklTxExRkelvKxxkkxxExaKvxiRniRrxaxxxiKkxxkxxxiseDxxkxxexeiqkltdxxixkidxlxxxK EKEllxv >c5mlc9_ SLIETNTKQRMEKTIETIRSNFNSVRLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQK EQELMKV >UniRef50_Q4PIH7(75-183:183) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIH7_USTMA E=5e-12 s/c=0.66 id=21% cov=76% ---------------------------TTESRQALVKDLTKICENARVSIRDARHKAQKQIKSDIDRKVVGKSEGDRESKKVEAETKKWSTQVDHLFEKI KATLLLV >UniRef50_Q4A7I9(86-186:186) Ribosome recycling factor n=5 Tax=Mycoplasma RepID=Q4A7I9_MYCH7 E=4e-11 s/c=0.68 id=26% cov=95% AIVAAKIDAQVQKEANQVRLIFPEP--THQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKK----EEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKK VKAIQTI >UniRef50_B6KT32(160-264:266) Ribosome recycling factor domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KT32_TOXGO E=4e-11 s/c=0.66 id=27% cov=76% -------------------------KVTSEMREELKTKARVFLVTAKSAVRNMRQAGRSHLHKLQfKSRSIDDVKRRELDASLTTLMETYVAKCDKVFNE KMQQFL-- >UniRef50_A7EK01(201-283:288) Predicted protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EK01_SCLS1 E=1e-08 s/c=0.73 id=21% cov=71% ---------------------------TKESRDAALQAASKAGELASNGVRNARGAMQKKLRAMEVKKTVRPDDSKKAHKEMEKVVEKGNGEVKKLVEAA RK----- >UniRef50_Q6CHA2(151-261:264) Ribosome-recycling factor, mitochondrial n=1 Tax=Yarrowia lipolytica RepID=RRF1_YARLI E=0.001 s/c=0.40 id=25% cov=50% ----------------------------------------------------IRDAFKKDHKKMADQKSIGKDVVKREDKKFEELQKAWTSKIEKEFKTV SDEI--- >UniRef50_B7G6Q3(208-312:314) Predicted protein n=2 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G6Q3_PHATR E=5e-13 s/c=0.72 id=28% cov=76% -------------------------RVSLEVRQQTAKALTKHTEKYRQRVRTIRRNVLKVVKQGEagKLEGISKDDAFRAQKEIEDVTEKIMVKLNEAAE QKHKAIM-- >UniRef50_B9WLJ7(213-307:307) Ribosomal recycling factor, mitochondrial, putative n=4 Tax=Saccharomycetales RepID=B9WLJ7_CANDC E=6e-10 s/c=0.69 id=26% cov=75% --------------------------ITAETKQENIKQLKEIFENLKNnhkssSLNYVRSEARNKFQSGLKHNKIS-DNQHQLLKKLETLHKTYVDKLTD AFKQAEKSILK- >UniRef50_B5XEQ2(164-264:265) Ribosome recycling factor, mitochondrial n=2 Tax=Salmo salar RepID=B5XEQ2_SALSA E=9e-20 s/c=0.97 id=25% cov=95% SLRESSMKLNPEVDGTIIRVAIP--KVTREHRENLAKLAKQFSNKAKESLRKVRSNAITQVKKAKD--TVSEDTIRLVEKQIGQMADSFAADVDKQLTTK TKELL-- >UniRef50_B0D6Q1(148-221:227) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D6Q1_LACBS E=5e-05 s/c=0.66 id=27% cov=63% ---------------------------TVDARHALYAAAKRKAEEMRVQIRKQHSLSVKRGKFEKHSVEL---------EEFQKLTDRYIGEVDKVLANL QK----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1039 * * * * * * * * * * * * * * 962 * * * * 1 0 * * * * * * 2930 0 0 L 2 * * * * * * * 1039 * 962 * * * * * * * * * * 2 0 * * * * * * 2930 0 0 I 3 * * * * 2592 * * 2633 * 1706 * * * * 2424 * * 2474 * * 3 0 * * * * * * 2930 0 0 E 4 2779 * 3043 708 * * * * 3047 * * * * * * * * * * * 4 0 * * * * * * 3075 0 0 T 5 2952 * * * * 3490 * 3230 3477 * * * * * * 1503 2105 * * * 5 0 * * * * * * 3267 0 0 N 6 * * * * * * * * 2952 * * 660 * * * 2071 * * * * 6 0 * * * * * * 3267 0 0 T 7 3073 * * * * * * 1551 * 3107 1689 * * * * * 3137 * * * 7 0 * * * * * * 3267 0 0 K 8 3490 * 2952 * * 2175 * * 1508 3477 * * * * * * * 3073 * * 8 0 * * * * * * 3267 0 0 Q 9 2196 3107 * * * * * 3245 * 2929 * 3230 * 2297 * * * * * 3073 9 0 * * * * * * 3267 0 0 R 10 3477 * * * * * * * 3490 * * 2929 * 2952 3137 2149 2175 * * * 10 0 * * * * * * 3267 0 0 M 11 * * * * * * * 2019 * * 3532 * 1736 * * * * 1448 * * 11 0 * * * * * * 3371 0 0 E 12 * * * 737 * * * * * * * * * 2329 3280 * * 3348 * * 12 0 * * * * * * 3371 0 0 K 13 * * * 3280 * * * * 745 * * 3441 * * * 3348 * 3185 * * 13 0 * * * * * * 3371 0 0 T 14 1665 * 1713 3226 * * * * * * * * * * * 3504 2437 * * * 14 0 * * * * * * 3371 0 0 I 15 3348 * * * * 1850 * 1153 * * * * * * * * * 2518 * * 15 0 * * * * * * 3463 0 0 E 16 * * 2540 1848 * * * 4053 * 4485 * 2308 * 4107 4491 3940 3723 * * * 16 87 4092 * 2585 263 * * 3768 1000 0 T 17 * * 4556 * * * * 2575 3948 * 4035 4098 * 3766 * 2581 1698 4140 * * 17 87 * 4095 * * * * 3801 0 0 I 18 4675 * * * * * * 1075 * 3256 * * 3301 * * 3363 * 2452 * * 18 0 * * * * * 0 3720 0 1000 R 19 * * * 4130 * * * * 3483 * * 2875 * * 584 4318 * * * * 19 90 * 4053 * * 0 * 3720 0 1000 S 20 * * * * * * * 2007 * 1363 * 4395 * * * 2834 4397 2974 * * 20 0 * * * * * 0 3702 0 1000 N 21 3834 * 2903 * 4807 2931 * 3142 * * * 2259 4264 * * 2737 3251 * * * 21 0 * * * * 0 * 3702 0 1000 F 22 * * * * 574 2980 * 3123 * 3528 * * * * * * * * * * 22 78 4252 * 3000 193 * * 3771 1000 0 N 23 4468 * * 4457 * * * * * * * 1990 841 * * 4457 4219 * * * 23 270 * 2551 * * * * 3771 0 0 S 24 2587 * * 3714 * * * * * 3243 * * 1651 * * 2657 3158 3996 * * 24 803 3501 1563 3459 138 * 0 3512 1368 2037 V 25 * * * * * * * 2058 * * * * 986 * * * * 1971 * * 25 651 3448 1881 3459 138 1549 603 3169 1000 3152 R 26 4973 * * 5475 * * * * 1239 * 5965 * 5819 2020 2048 * * * * * 26 29 5663 * 2322 322 573 1610 4922 1000 3048 L 27 * * * * * * * 4919 * 810 2655 * * * * * * 2072 * * 27 41 5163 * 2322 322 0 * 5307 1838 1897 T 28 * * * * * * * * * * * 4363 * * * 3165 252 * * * 28 0 * * * * * * 5743 0 0 S 29 3711 * * 1447 * 4398 6078 6773 2821 5068 * * * 3244 3717 4331 3995 5643 * * 29 0 * * * * * * 5743 0 0 D 30 5589 * 2960 328 * * * * * * * * * 4648 * 6124 * * * * 30 0 * * * * * * 5743 0 0 R 31 5643 * * 6773 * 6342 3257 7016 5374 6904 4070 7060 * 5518 1341 3611 2865 4495 * 3904 31 0 * * * * * * 5743 0 0 R 32 * * * * * * * 5779 3726 * * * * * 184 * 6917 5798 * * 32 0 * * * * * * 5743 0 0 K 33 6095 * 4643 2572 6699 6764 5022 * 1275 5586 * 6270 * 2502 3631 * 6813 * * 6128 33 0 * * * * * * 5777 0 0 E 34 3487 * 3464 1202 * 5848 * 5686 4066 4804 * 3340 * 3295 * 5310 5190 * * * 34 0 * * * * * * 5777 0 0 L 35 4632 * 5923 * 4430 * * 3727 * 966 3524 4906 * * * 4937 4285 3823 7256 5170 35 0 * * * * * * 5777 0 0 A 36 2629 4855 * * * 7486 * 2852 4916 3675 6377 * * * 6136 3339 5324 1402 * 5654 36 0 * * * * * * 5777 0 0 K 37 4781 * * 6386 * * 6152 * 275 * * * * 4990 6101 4961 5367 6783 * * 37 0 * * * * * * 5777 0 0 V 38 3476 * 4128 4858 * 5570 6733 4155 2633 2622 4168 4205 * 2975 5513 4816 5044 3738 * 6880 38 0 * * * * * * 5777 0 0 V 39 1352 4581 * * * * * 3586 * 2299 * * * * * 6386 5065 2070 * * 39 0 * * * * * * 5777 0 0 S 40 5244 * 5838 6518 * 4487 3911 5686 897 * * 4036 * * 3118 3880 4900 * * * 40 0 * * * * * * 5777 0 0 K 41 3038 * 6786 2932 6121 5182 6133 * 1468 5467 5660 4923 * 3900 4338 3930 5154 4833 * * 41 0 * * * * * * 5785 0 0 L 42 3704 * 6666 3243 3567 * 6440 2783 3646 3334 3762 5436 * 4617 4579 4702 6139 4035 * 3402 42 0 * * * * * * 5785 0 0 A 43 2018 4029 * * 3470 2605 5147 6756 7026 3065 4787 * * 6677 * 3264 4478 4834 * 4551 43 0 * * * * * * 5785 0 0 E 44 * * 4124 323 * * * 6338 * 5572 * 4665 * * * * * 3831 * * 44 0 * * * * * * 5785 0 0 E 45 5861 * 3095 1835 * 6159 4557 6121 2083 5165 * 4167 * 3547 4847 5967 4310 6931 * * 45 0 * * * * * * 5785 0 0 G 46 1228 4238 * * 4734 3123 5340 5734 6984 6392 5658 6699 * * * 3964 3497 4327 * 3785 46 16 6474 * 2322 322 * * 5785 1000 0 K 47 5942 * * * * * 6303 6699 658 * * 5977 * * 1793 5424 * * * * 47 0 * * * * * * 5785 0 0 V 48 * * 4344 3736 * 5942 5436 2141 5861 6690 * 3917 * 3576 * 5368 4479 1460 * * 48 38 5276 * 2586 263 * * 5785 1408 0 A 49 1900 * 5830 4613 6393 3843 6150 6677 4784 6132 5690 4067 * 5658 3762 1757 5499 5198 * * 49 0 * * * * * * 5785 0 0 V 50 4844 * * * 5572 * * 1361 * 2143 5263 * * * * * 6737 1771 * * 50 0 * * * * * * 5785 0 0 R 51 6169 * * * * 6474 * * 6338 * * 6392 * * 136 * 5436 5830 * * 51 24 5930 * 2000 415 * * 5785 1000 0 N 52 4583 * 4313 5660 7080 4211 4715 * 4231 5551 * 964 * 5846 3480 5006 4279 * * 6392 52 0 * * * * * * 5785 0 0 I 53 3025 * * 6747 * * 5946 1212 5027 3907 5408 * * 5683 * 5951 6397 1991 * * 53 23 * 5979 * * * * 5799 0 0 R 54 * * * 5807 * * 4571 * * * * * * 4326 168 * * * * * 54 43 * 5097 * * * 0 5769 0 1000 R 55 * * 6509 * * 3897 4376 * 3770 6112 * 5388 * 2622 1078 3077 7072 * * * 55 0 * * * * 1446 660 5727 0 1922 D 56 3595 * 1508 2370 * * 6353 * 2641 4557 * 4004 * 6108 5018 5673 7331 5403 * * 56 21 * 6097 * * * 0 5763 0 1459 A 57 1294 5829 6753 * 4945 2845 * 3648 * 4794 5587 * * * * 3967 5077 3631 * 3598 57 44 * 5054 * * 684 1405 5731 0 2006 L 58 6141 * * * * * 5903 3057 3656 2935 2469 2089 * 4016 3781 5407 * 3940 * * 58 13 * 6759 * * * 0 5771 0 2440 K 59 5478 * 2055 2971 * * 5849 4887 1907 * * 3221 * 3924 6620 3580 5332 * * * 59 9 * 7252 * * 2257 339 5762 0 2640 S 60 3830 * 3685 2904 6064 6268 3504 5803 2329 4113 5725 6729 * 3416 3713 4185 5402 5521 * 5112 60 24 * 5933 * * 696 1386 5801 0 2509 Y 61 3098 * * 7111 3812 5671 5752 1604 * 1910 5296 6922 * * * * 5597 3286 * 6091 61 0 * * * * 534 1692 5766 0 1983 E 62 * * 4585 4129 * 5867 3835 * 606 * * * * 3445 4167 6694 * * * * 62 29 * 5642 * * 0 * 5804 0 1000 K 63 4712 * 5914 4998 5680 4099 5023 6871 1115 4899 * 3816 6813 5534 4521 3779 4470 5964 * 5466 63 61 * 4594 * * * 0 5774 0 1579 L 64 3185 5825 4384 4790 4890 4569 5275 4776 5332 1575 3142 5063 * 4598 * 5280 6221 4371 * 5815 64 115 * 3706 * * * 0 5754 0 2714 E 65 4847 * * 2078 * 5421 6032 5224 1631 3555 * 3970 * 3263 5944 5568 * 4328 * * 65 268 4664 2943 416 1998 2660 248 5758 1732 3620 K 66 5603 * 3219 4603 * * 5458 * 814 * 5312 3784 * 5261 4465 5721 5440 5151 * * 66 74 * 4324 * * 2659 249 5705 0 4185 E 67 3692 * 2593 2785 5247 3976 4784 5864 3314 6062 * 3001 * 4560 5000 3316 5020 5438 * * 67 14 * 6710 * * 1115 894 5649 0 4334 K 68 5688 * 5068 2921 * 2558 5166 * 1490 5719 * 3825 4976 * 4688 3777 6558 5541 * * 68 54 6425 5334 1000 1000 726 1339 5725 1000 3972 K 69 5751 * 3926 1943 * 2268 5490 3382 3802 4591 * 5291 5749 * * 3423 4433 4928 * * 69 39 5563 7437 1000 1000 507 1755 5776 1000 3109 L 70 4138 6592 * * 4926 * * 1557 6288 1679 4835 5444 * * * * 5283 2921 * 5706 70 28 * 5677 * * 580 1594 5793 0 2038 S 71 5318 * 4515 6108 * 3003 * 7064 5298 * * 5021 4046 7204 4341 1043 2983 * * * 71 40 * 5196 * * * 0 5742 0 1651 E 72 * * 3826 807 * 7041 * * 1977 * * * 4528 5788 * 5603 6130 * * * 72 26 * 5830 * * 511 1745 5703 0 2351 D 73 * * 184 5623 * * * * * * * 4476 * * * 5036 * 5385 * * 73 0 * * * * * 0 5711 0 1618 N 74 5622 6096 1818 1816 6043 7373 6941 6040 4486 3710 5388 4937 * 6847 6052 4406 5187 3697 * * 74 0 * * * * 868 1145 5711 0 1618 V 75 3213 7541 6694 3209 7223 5619 5750 3004 3863 3032 5870 5378 * 3659 4331 4073 6374 2800 * 5470 75 0 * * * * * 0 5749 0 1000 K 76 5618 * 5427 4617 3618 * 2822 7202 1159 6517 * 5895 * 5674 3066 6185 * 6462 * 4429 76 0 * * * * * 0 5749 0 1000 D 77 4706 * 3705 4979 5667 4574 4922 4656 2098 5622 5608 5209 * 4124 1919 5632 4990 6111 6983 5521 77 0 * * * * * 0 5749 0 1000 L 78 2703 * 6898 4265 3697 4500 * 3719 * 2010 4558 4783 * 4610 6462 7277 4845 3269 7156 4122 78 0 * * * * * 0 5749 0 1000 S 79 7443 * 4851 1401 6170 5762 5792 6473 3158 3110 * * * 2858 * 3646 5643 4222 * * 79 24 * 5914 * * 0 * 5749 0 1000 A 80 4486 * 3137 2150 * 6154 * 6126 1587 4839 * 3521 * 4439 6160 5816 4736 5814 * * 80 0 * * * * 0 * 5757 0 1000 D 81 6289 * 3039 1588 * 6971 * 5629 2889 6826 6599 4973 * 2317 4639 4559 7423 5809 * 6392 81 0 * * * * * * 5797 0 0 L 82 5274 * * * 4527 * * 1396 * 1991 4026 6527 * * * * * 2139 * * 82 0 * * * * * * 5797 0 0 Q 83 * * 3019 2041 * 6762 6814 * 5836 * * * * 970 5629 5980 4974 5672 * * 83 0 * * * * * * 5797 0 0 K 84 3260 * 3576 3375 * 6697 * 6527 1253 6766 5836 4062 * 4575 5414 4324 4117 5980 * * 84 0 * * * * * * 5797 0 0 L 85 5482 * * 4005 5968 * 7423 2329 * 1166 4593 6163 * * * 5782 6992 2877 * 4998 85 0 * * * * * * 5797 0 0 T 86 3596 * * * 5879 5672 3691 4206 * 4923 5418 4995 * 6579 * 6357 802 4349 * 5942 86 0 * * * * * * 5797 0 0 D 87 6177 * 1171 2816 * * 5912 * 2003 6796 * 3581 * 7187 7011 6063 6392 * * * 87 0 * * * * * * 5797 0 0 E 88 4482 * 3111 3050 * 5042 4831 5399 1560 5263 * 5271 * 4421 4164 4116 3914 6391 * * 88 0 * * * * * * 5798 0 0 Y 89 5456 6117 * 5476 2397 4210 3314 5185 5302 6108 5873 6800 * 6865 * 4592 5368 5517 4434 1473 89 0 * * * * * * 5798 0 0 M 90 4264 5407 6883 3897 * * * 1311 5948 6683 5842 4782 * 5162 * 4042 3356 2476 * * 90 0 * * * * * * 5802 0 0 K 91 2711 * 3255 3307 * 3881 5622 6488 1779 * * 4464 * 4787 5006 4195 3795 6438 * * 91 0 * * * * * * 5802 0 0 K 92 7174 * 4750 2329 * 7174 * 5116 1554 4736 * 5922 * 3046 4208 3495 5641 4547 * * 92 0 * * * * * * 5802 0 0 V 93 2711 4943 * * * * * 1533 * 2394 5441 * * * * * 6587 2026 * * 93 0 * * * * * * 5802 0 0 E 94 6954 * 1088 2223 * * 5479 6116 4195 * 5948 3655 * 4462 * 5857 4118 * * * 94 0 * * * * * * 5802 0 0 S 95 4673 * 2327 2024 * 5098 6189 5224 2445 5332 * 5380 * 3981 6162 4051 3971 6379 * * 95 0 * * * * * * 5802 0 0 I 96 3318 * * 5838 * * * 2283 5918 1707 3491 * * 4210 7045 5284 6864 2564 * * 96 0 * * * * * * 5810 0 0 Y 97 3442 4548 * * 2209 * 5907 4081 * 1991 6069 * * 5511 * 5117 3495 3017 * 4512 97 0 * * * * * * 5778 0 0 K 98 2740 * 4934 2361 6338 * * * 1601 6857 * 4152 * 5019 4158 3855 5262 4866 * * 98 0 * * * * * * 5778 0 0 Q 99 2334 * 5160 2948 * * 4286 5687 2785 5723 * 4427 * 3290 4159 3652 3387 5080 * * 99 0 * * * * * * 5778 0 0 K 100 4011 * * * 5907 * * 6165 309 5645 * * * * 6638 5660 5899 4896 * * 100 0 * * * * * * 5778 0 0 E 101 * * * 706 * * 4974 6711 4101 6944 5391 6878 * 3185 4685 5667 3995 5988 * * 101 0 * * * * * * 5756 0 0 Q 102 4102 * 5109 3774 * * 6120 * 697 6096 * 4571 * 3713 4981 5596 5441 * * * 102 0 * * * * * * 5756 0 0 E 103 3795 * 2667 718 * * * * * * * * * 4397 5539 4248 4612 * * * 103 0 * * * * * * 5605 0 0 L 104 * * * * 5346 * * 1240 * 1067 * * * * * * * 3741 * * 104 0 * * * * * * 5605 0 0 M 105 * * * * * * * 6306 * 1128 1252 6511 * 4671 5613 5145 6482 * * * 105 0 * * * * * * 5279 0 0 K 106 6805 * 5643 1880 * * 6109 * 2328 5105 * 5876 * 4709 4120 3768 2016 5429 * * 106 0 * * * * * * 4772 0 0 V 107 * * * * * * * 1579 * 3798 * * * * * * * 753 * * 107 0 * * 0 * * * 4348 0 0 //