HHsearch 1.5 NAME c5m73H_ FAM FILE c5m73H_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5m73H_.a3m DATE Fri Feb 10 06:46:16 2017 LENG 41 match states, 41 columns in multiple alignment FILT 37 out of 41 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.5561 4.7898 SEQ >ss_dssp CCCCCTTSSCCCCCCSCTTTSTTCCCCHHHHHHHHHHHHHC >sa_dssp EEEEECEEEEEEEDEEDEEECEEEEEEEECEEEDDDDEEEE >ss_pred CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC >ss_conf 98787788887110134345433233544444555430369 >Consensus xxxPKnxdpxxPERWLPxxeRsxyrxKkxxkxkxxxgkGtQ >c5m73H_ KKKPKNYDPKVPERWLPMRERSYYRGRKKGKKKDQIGKGTQ >UniRef50_A8XVZ0(560-601:649) Putative uncharacterized protein n=2 Tax=root RepID=A8XVZ0_CAEBR E=5e-09 s/c=1.48 id=55% cov=98% -RLPKNYNPDVapdPERWLPRQERSTYKKKRKNRERE-IGRGTQ >UniRef50_C6HR04(592-633:671) Signal recognition particle protein n=4 Tax=Onygenales RepID=C6HR04_AJECH E=2e-07 s/c=1.36 id=50% cov=98% -RLPKDYDPSKkpdPERWLPLRDRSSYRPK-GKKGKQRAAERTQ >UniRef50_UPI000186EF42(562-603:657) Signal recognition particle 72 kDa protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EF42 E=6e-09 s/c=1.48 id=44% cov=95% ---PQYYEPgvmPDPERWLPRHQRTGYKKKKDRRGGRDVGKGTQ >UniRef50_C1MVX8(643-686:740) Type II secretory pathway family protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVX8_9CHLO E=6e-08 s/c=1.33 id=47% cov=93% ---PKGFDPenpgpmPDPERWLPKRERSGHKGKKKKQANVRGAQGA- >UniRef50_D1I2D0(591-618:696) Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) n=5 Tax=rosids RepID=D1I2D0_VITVI E=7e-06 s/c=1.84 id=55% cov=71% ------------ERWLPKRERSSYRPKRKDKRAAQV-RGSQ >UniRef50_Q5CY17(594-639:680) Signal recognition particle SPR72 n=2 Tax=Cryptosporidium RepID=Q5CY17_CRYPV E=2e-08 s/c=1.31 id=49% cov=95% -RYPKGFDPlnpgqePDPERWLPKEQRSSFKKlnKNRSSKKGQIGKG-- >UniRef50_Q5BHY9(557-598:650) GH10846p n=14 Tax=Endopterygota RepID=Q5BHY9_DROME E=4e-08 s/c=1.41 id=44% cov=95% ---PKNYNaevAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQ >UniRef50_C5E2D0(540-579:603) KLTH0H03938p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5E2D0_LACTC E=9e-08 s/c=1.44 id=45% cov=93% RKFPKDFDAerePNPERWLPLKDRSDFRPKKKLAAKQTQG---- >UniRef50_A0C377(479-519:551) Chromosome undetermined scaffold_146, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0C377_PARTE E=1e-05 s/c=1.25 id=43% cov=85% ---PKNFDKtnpgplPNPERWLPKHERKEWKKKKQIHSRTQGG---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 982 * * * * * 1019 * * * * * 1 0 * * * * * * 1590 0 0 K 2 * * * * * * * * 1214 * * * * * 814 * * * * * 2 0 * * * * * * 1915 0 0 K 3 * * * * 3492 * * * 3121 762 * * * * * * * * * 2276 3 0 * * * * * * 1915 0 0 P 4 * * * * * * * * * * * * 0 * * * * * * * 4 0 * * * * * * 2161 0 0 K 5 * * * * * * * * 88 * * * * 4073 * * * * * * 5 0 * * * * * * 2161 0 0 N 6 5114 * 3027 * * 2770 * * * * * 631 * * * * * * * 4156 6 0 * * * * * * 2191 0 0 Y 7 * 4659 * * 1083 * * * * * * * * * * * * * * 1033 7 39 5214 * 1585 585 * * 2191 1000 0 D 8 * * 608 3603 * * * * * * * 2575 * 3899 * * 5214 * * * 8 102 3870 * 1971 425 * * 2191 1478 0 P 9 3340 * * 4118 * * * * 3854 * * * 508 * * 4951 4684 * * * 9 852 1164 * 2036 403 * * 2204 1977 0 K 10 5378 * 4456 3225 * 4065 * * 3984 * * 4469 800 * * 4210 5208 * * * 10 86 4118 * 1585 585 * * 2204 1238 0 V 11 * * 912 * * * * 4650 3298 * * 3318 * * * * * 2142 * * 11 596 1564 * 1585 585 * * 2204 2018 0 P 12 * * * * * * * * * * * * 0 * * * * * * * 12 0 * * * * * * 2330 0 0 E 13 * * * 99 * * * * * * * 3917 * * * * * * * * 13 0 * * * * * * 2288 0 0 R 14 * * * * * * * * * * * * * * 0 * * * * * 14 0 * * * * * * 2288 0 0 W 15 * * * * * * * * * * * * * * * * * * 0 * 15 0 * * * * * * 2288 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 2288 0 0 P 17 * * * * * * * * 4083 * * * 88 * * * * * * * 17 0 * * * * * * 2288 0 0 M 18 * * * * * * * * 1271 2094 4986 * * * 1762 * * 5324 * * 18 0 * * * * * * 2288 0 0 R 19 * 4508 * 4604 * * 2824 * 3686 * * * * 3471 1223 * * * 3730 3291 19 0 * * * * * * 2288 0 0 E 20 * * 2302 455 * * * * * * * * * 3886 * * * * * * 20 0 * * * * * * 2288 0 0 R 21 * * * * * * * * * * * * * * 0 * * * * * 21 0 * * * * * * 2288 0 0 S 22 * * * * * * * * 3664 * * * * * * 550 2072 * * * 22 0 * * * * * * 2288 0 0 Y 23 4793 * 4119 4396 * 2430 3917 * * * * * * * * 1711 2367 * * 3213 23 0 * * * * * * 2288 0 0 Y 24 * * * * 2037 * 5144 * * * * * * * * * * * 3836 604 24 0 * * * * * * 2288 0 0 R 25 4083 * * * * * * * 1143 * * * * * 1034 * * * * * 25 50 4886 * 0 * * * 2288 1000 0 G 26 * * * * * 2094 4508 * 1295 * * * 2015 * 4920 4886 * * * * 26 63 4546 * 1000 1000 * * 2288 1000 0 R 27 * * * * * * * * 330 * 4539 * * * 2629 * * * * * 27 165 5296 3601 0 * * * 2414 1000 0 K 28 * * * * * * * * 1040 3605 * 4429 * * 1377 * * * * * 28 42 * 5130 * * 0 * 2426 0 1186 K 29 4429 * 3086 * * 2950 * * 1919 * * 3673 * 3902 1753 * * * * * 29 0 * * * * * 0 2492 0 1000 G 30 * * 3387 * * 3395 4852 3262 2215 4701 * 4031 * 5369 1812 4431 * * * * 30 0 * * * * 0 * 2877 0 1000 K 31 3729 * * * * 4932 3983 * 1665 * * * * 3363 1589 3578 * * * * 31 0 * * * * * * 2970 0 0 K 32 3210 * * 4132 * 1869 4684 * 2174 * * 3978 * * 3603 3519 * 3887 * * 32 0 * * * * * * 2891 0 0 K 33 2779 * * 4157 * 3720 * * 1313 * * 4532 * 4009 2222 * * * * * 33 0 * * * * * * 2891 0 0 D 34 2496 * 2291 3603 * 4338 * * 3335 * * 3720 * 3181 4793 * 3033 4532 * * 34 85 * 4132 * * * * 2891 0 0 Q 35 4726 * 3657 * * 4116 * * * * * 3354 5055 1766 2384 4975 2733 5080 * * 35 166 3204 * 0 * 0 * 2866 1434 1074 I 36 2859 * * * * 2823 * 1648 * 3876 * * * 3737 4141 * 4810 2589 * * 36 155 * 3299 * * * * 2899 0 0 G 37 2369 * * * * 595 * 4434 * * 4628 * * 4116 * * * * * * 37 89 * 4059 * * 0 * 2735 0 1600 K 38 4388 * * 3193 * 4213 * * 853 * * * * 3939 2554 * * * * * 38 0 * * * * 0 * 2657 0 1000 G 39 4664 * * * * 239 * * * 4422 * * * * 3913 * * * * * 39 0 * * * * * * 2716 0 0 T 40 2508 * * * * * * * * * * * * * * 1947 824 * * * 40 0 * * * * * * 2580 0 0 Q 41 * * * * * * * * * * * * * 0 * * * * * * 41 0 * * 0 * * * 2501 0 0 //