HHsearch 1.5 NAME c5lnko_ FAM FILE c5lnko_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5lnko_.a3m DATE Thu Feb 9 17:32:38 2017 LENG 120 match states, 120 columns in multiple alignment FILT 18 out of 22 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.5 EVD 0.3992 -1.3450 SEQ >ss_dssp CCHHHHTSSTTCSSCTTGGGSCCCCTTCHHHHHHHHHHHHHHHHHHHHSSSCTTSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTT SCCCCCCCTTSCCCCCCCCC >sa_dssp ECEEDCDEDEEDDCCEDBEECEEBEEEBEDBDECBEDADCCACECAEEEEDEDEDDCEEDBEECCDDCDEDBCDEBCDDDBCDCBDDEDDEDDDEDDEED DEEEEEEEEEEDEEEEEEEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC CCCCCCCHHHHHHHCCCCCC >ss_conf 9754357470001654224799854354104898899776877765543586310245799999999999999999999899855453779999608230 68756351888731120479 >Consensus xxxxxxxxxpxxxlpdexxxlppxxixnxxsxxlGxvGxxsaxlxNxxxrRPxlxsGvhrxilxxtiGxxxGYxlxkxxxxxxaxrDaxxxhYixlHPED FxxxerKkxxevlexWxPvR >c5lnko_ MMTGRQARAPLQFLPDEARSLPPPKLTDPRLAYIGFLGYCSGLIDNAIRRRPVLSAGLHRQFLYITSFVFVGYYLLKRQDYMYAVRDHDMFSYIKSHPED FPEKDKKTYREVFEEFHPVR >UniRef50_Q4TA35(1-99:123) Chromosome undetermined SCAF7454, whole genome shotgun sequence n=10 Tax=Euteleostei RepID=Q4TA35_TETNG E=5e-41 s/c=1.70 id=35% cov=83% ----------MGFIPDEGKALPPPGIVNRNSFWLGGVGWCTAMLHNAINHRPPLKSGVHRQVLLTTIGWFLGYHLSKYENYMECQTGPGHEGVHQTPPGG FCSKRKKDF----------- >UniRef50_UPI00006A3C72(35-134:136) PREDICTED: hypothetical protein n=1 Tax=Ciona intestinalis RepID=UPI00006A3C72 E=0.0004 s/c=0.46 id=22% cov=82% ----------------------PVPILNNASIILGMVG-VGGPLYTMVVKRQNASAGMYKTFFLATLGVWTGYYITRAFNQYYFGKFKFSLEYAMMRKGD FKKTiEPTKYGdpEFLKKWKPIR >UniRef50_B4KEV1(8-118:118) GI17982 n=2 Tax=Endopterygota RepID=B4KEV1_DROMO E=8e-25 s/c=1.03 id=32% cov=92% --------DPLEILTNKGTRQPTflSPIWNP--MAGALAGFGAALFTNWGFRKPIL-SGIQKHILFTIIGGGVGYYLDNKRNEYLAKRDAVLRHYVELHP EDFPKTNRKKYADVLESWVPVR >UniRef50_C4WSG2(14-129:129) ACYPI009829 protein n=2 Tax=Acyrthosiphon pisum RepID=C4WSG2_ACYPI E=3e-19 s/c=0.83 id=26% cov=80% -------------------------LEDKWFPFMGFVLGAGSIWYTYTLNRRPFYSGIHVKLGAGIVGATTLYYYKQYRTSYLADKDAMYRHYIQLHPED FQAPERKKVGELFKEWVPVR >UniRef50_UPI00015B59AD(37-120:120) PREDICTED: similar to CG12400-PA n=1 Tax=Nasonia vitripennis RepID=UPI00015B59AD E=4e-08 s/c=0.71 id=32% cov=55% -------------------------------------------------------SGVRRYTFALTAGLIAAKVLKDAKYHREAERDAVMRHYIKLHPED FPPPVRKTFNEELRDWVACR >UniRef50_B5FXS8(1-111:111) Putative uncharacterized protein n=1 Tax=Taeniopygia guttata RepID=B5FXS8_TAEGU E=1e-32 s/c=1.26 id=45% cov=92% ----------MAFLPDESRALPPPPLLNKGSVWLGFVGWMSALMDNAFNQRPIFRAGIHRQVLLASLGYFVGYQLVKRAEYVHAKADRELFEYIRHHPLD FQSPtEKKRIGQLLEDFYPIR >UniRef50_UPI000058523F(14-109:109) PREDICTED: similar to GA11610-PA n=1 Tax=Strongylocentrotus purpuratus RepID=UPI000058523F E=3e-20 s/c=1.04 id=29% cov=80% ------------------------KILNKYTWMCAGYGLASSFVNNGLLRRPFLSGG-HRHIIASIIGGSIGYFIGRFESRALAEREFYIEEYVNRHPED FSKETPKKLGEVTQRWLPVR >UniRef50_UPI000186DE7E(53-138:138) NADH-ubiquinone oxidoreductase subunit B14.5B, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DE7E E=2e-18 s/c=1.09 id=31% cov=72% ---------------------------------MGALGITVPIVYNYLLRRP-LWSGVPLYFLSIGGFYFFAKQWNTYRLGALMEKEAIYKHYISLHPED FPPFEKTQIKDLFVPWTPVR >UniRef50_Q9BL33(24-132:139) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q9BL33_CAEEL E=2e-13 s/c=0.71 id=26% cov=71% -----------------------------------GISLASVYLQNRWNKKPYYYAIVPR-LLLIGAATAAGYAAGALRERHYQTRDAVIEHYMKLHPED FDhfnDRSGRSFSQVLLPWYPRR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 M 2 * * * * * * * * * * 0 * * * * * * * * * 2 0 * * * * * * 1184 0 0 T 3 * * * * * * * 1000 * * * * * * * * 1000 * * * 3 0 * * * * * * 1184 0 0 G 4 1000 * * * * 1000 * * * * * * * * * * * * * * 4 0 * * * * * * 1184 0 0 R 5 * * * * * * * * * * * * * * 0 * * * * * 5 0 * * * * * * 1184 0 0 Q 6 * * * * * * * * * * * * * 1000 1000 * * * * * 6 0 * * * * * * 1184 0 0 A 7 1000 * * * * * * * * * * 1000 * * * * * * * * 7 0 * * * * * * 1184 0 0 R 8 * * * * * * * * * * * * 1000 * 1000 * * * * * 8 0 * * * * * * 1184 0 0 A 9 2035 * 987 1991 * * * * * * * * * * * * * * * * 9 0 * * * * * * 1869 0 0 P 10 * * * * * * * * * * * * 0 * * * * * * * 10 0 * * * * * * 1869 0 0 L 11 * * * * * * * * * 827 1197 * * * * * * * * * 11 0 * * * * * * 2500 0 0 Q 12 2966 * * 1667 * 2436 * * * * * * 3019 3005 3006 * * * * * 12 0 * * * * * * 2500 0 0 F 13 * * * * 546 * * 2751 * 2588 * * * * * * * * * * 13 0 * * * * * * 2500 0 0 L 14 * * * * * * * 2722 * 463 * * * * * * * 3022 * * 14 0 * * * * * * 2575 0 0 P 15 * * * * * * * * * * * * 495 * * * 1784 * * * 15 0 * * * * * * 2575 0 0 D 16 * * 495 * * * * * * * * 1784 * * * * * * * * 16 0 * * * * * * 2575 0 0 E 17 * * * 495 * * * * 1784 * * * * * * * * * * * 17 0 * * * * * * 2575 0 0 A 18 1159 * * * * 1178 * * * * * * * * * 3182 * * * * 18 0 * * * * * * 2575 0 0 R 19 * * * * * * * * 1865 * * * * * 1201 * 1784 * * * 19 0 * * * * * * 2575 0 0 S 20 1934 * * * * 3022 2694 * * * * * * * 2879 1623 * * * * 20 0 * * * * * * 2575 0 0 L 21 * * * 2694 * * * * * 495 * * * 2879 * * * * * * 21 0 * * * * * * 2575 0 0 P 22 * * * * * * * * * * * * 0 * * * * * * * 22 0 * * * * * * 2575 0 0 P 23 * * * * * * * * * * * * 384 * * 2996 3207 * * * 23 384 2098 * 1000 1000 * * 2986 1198 0 P 24 * * * * * * * * * * * * 745 * * 2098 * 2557 * * 24 0 * * * * * * 2986 0 0 K 25 * * * * * 2309 * * 1775 * * * 983 * * * * * * * 25 0 * * * * * * 3209 0 0 L 26 * * * * * * * 757 * 1292 * * * * * * * * * * 26 0 * * * * * * 3470 0 0 T 27 * * * 3046 * * * * * 1659 * * * * * * 2733 2015 2605 * 27 0 * * * * * * 3470 0 0 D 28 * * 1881 * * * * * * * * 457 * * * * * * * * 28 0 * * * * * * 3470 0 0 P 29 * * * * * * * * 1443 * * 2927 1667 * 2427 * * * * * 29 116 * 3694 * * * * 3470 0 0 R 30 2861 * * * * 2769 * 3133 * * * 2360 * * 2653 * * * 2963 3063 30 0 * * * * * 0 3437 0 1000 L 31 3133 * * * 2963 * * * * 2653 * * * * * 1062 3063 * * * 31 0 * * * * 0 * 3437 0 1000 A 32 3752 3521 * * 3243 * * 2927 * 3713 3694 * 3046 * * * * 2203 3187 * 32 0 * * * * * * 3470 0 0 Y 33 3694 * * * 3046 3521 * 2927 * * 3187 * * * * * * * 1631 2733 33 0 * * * * * * 3470 0 0 I 34 * 3361 * * * 3829 * 2885 * 1276 2280 * * * * * * 3678 * * 34 0 * * * * * * 3676 0 0 G 35 2212 * * * * 351 * * * * * * * * * * * * * * 35 0 * * * * * * 3732 0 0 F 36 3573 * * * 1770 1448 * * * 2694 3298 * * * * * * * * * 36 0 * * * * * * 4038 0 0 L 37 4384 * * * * * * 2694 * 2025 * * * * * * 4432 1202 * 3820 37 96 3951 * 0 * * * 4038 1000 0 G 38 * * * * * 280 * * * 3624 * * * * * 3392 * * * * 38 240 * 2706 * * * * 4038 0 0 Y 39 * * * * 2792 3334 * 2582 * 2406 * * * * * * * * 1829 3067 39 0 * * * * 971 1030 3759 0 1673 C 40 1636 2384 * * * 3031 * * * 4359 3006 * * * * * 3524 3263 * * 40 0 * * * * 0 * 4016 0 1000 S 41 2778 * * * * 2015 * * * * * 4051 * * * 1649 2800 3573 * * 41 0 * * * * * * 4038 0 0 G 42 1299 * * * * 2300 * 4077 * * * * 3573 * * 2719 * 3392 * * 42 0 * * * * * * 4038 0 0 L 43 * 3013 * * 3820 * * 2207 * 2017 3569 * 3298 * * * * 4051 * 3392 43 0 * * * * * * 4038 0 0 I 44 * * * * 3330 * * 3302 * 1366 4281 * * * * * * 2224 3624 3951 44 0 * * * * * * 4038 0 0 D 45 * * 2328 * * * 2790 4278 * * * 3820 * 3392 * * 4384 3013 * 1906 45 0 * * * * * * 4038 0 0 N 46 * * * * * * * * * * * 291 * * * * 2452 * * * 46 0 * * * * * * 4038 0 0 A 47 2412 * * * * 3094 * * * 3204 3298 * * * 3392 4051 * * 2607 2598 47 0 * * * * * * 4038 0 0 I 48 * * * * 3354 2607 * 2429 * 2691 * * * * * 4077 3624 2626 3392 * 48 0 * * * * * * 4038 0 0 R 49 4432 * * * 3330 * * * * 2084 * 1779 * * 3302 3951 4077 3298 * * 49 0 * * * * * * 4038 0 0 R 50 * * * * * 4003 3607 * 2471 * * 3672 * 3407 993 * * * * * 50 0 * * * * * * 4073 0 0 R 51 * * * * * * * * 2160 * * * * * 365 * * * * * 51 0 * * * * * * 4073 0 0 P 52 * * * * * * * * * * * * 282 3332 3672 * * * * * 52 120 * 3650 * * * * 4073 0 0 V 53 2994 * * * 2959 * * 2691 * 3838 * 3227 2537 * * * * 2688 * 3525 53 0 * * * * 0 * 3906 0 1000 L 54 2767 * * * 1794 * * * * 1048 * * * * * * * * * 3624 54 345 * 2233 * * * * 4073 0 0 S 55 * * * * * * * * 2565 * * * * * 2978 1877 4077 * 3280 1890 55 0 * * * * 0 * 3812 0 1774 A 56 1307 * * * * 3978 * * * * * * * * * 909 * * * * 56 0 * * * * * * 3971 0 0 G 57 * * * * * 203 * 3770 * 4112 * * * * * * * * * * 57 95 * 3978 * * * * 3971 0 0 L 58 * * * * * * * 1594 * 3326 3271 * * * * * * 1103 * * 58 0 * * * * 0 * 3885 0 1000 H 59 * * * * * * 1141 * * * * * 2303 2371 4205 * * * * 3377 59 0 * * * * * * 3971 0 0 R 60 * * * * * * * * 1788 3808 * * * * 811 * * 3859 * * 60 110 * 3770 * * * * 3971 0 0 Q 61 * * * * 3728 * 1859 * 3794 * * * * 1552 * * 3309 * * 2891 61 0 * * * * 0 * 3841 0 1000 F 62 * * * * 2207 * * 2031 * 2083 * * * * * * 4205 2009 * * 62 0 * * * * * * 3971 0 0 L 63 4406 * * * 2732 3859 * 3147 * 834 * * * * * * * 4073 * * 63 0 * * * * * * 3971 0 0 Y 64 1759 4218 * * 3019 * * * * 1463 * * * * * 3808 * * * 3421 64 0 * * * * * * 3971 0 0 I 65 1979 * * * * 3107 * 1596 * 4205 * * * * * 3978 2459 * * * 65 0 * * * * * * 3971 0 0 T 66 4406 * * * 4112 2789 * 2559 * * * * * * * 3352 1241 4073 * * 66 0 * * * * * * 3971 0 0 S 67 2540 * * * * 2934 * 1566 * 2303 * * * * * 4352 * 3214 * * 67 0 * * * * * * 3971 0 0 F 68 3770 * * * 2601 509 * * * 4073 * * * * * * * * * * 68 0 * * * * * * 3971 0 0 V 69 3079 * * * 4494 2197 * * * 4205 * * * * * * 3770 2378 2479 3060 69 86 * 4112 * * * * 3971 0 0 F 70 2709 * * * 1297 3407 * 4433 * * * * * * * 3876 3683 4152 3360 * 70 0 * * * * 0 * 4088 0 1000 V 71 2190 * * * 3808 * * 2514 * 2774 * * * * * * 1980 2891 * * 71 0 * * * * * * 3971 0 0 G 72 2434 * * * * 423 * * * 3859 * * * * * * * * * * 72 0 * * * * * * 3971 0 0 Y 73 4406 * * 4338 * * * * 2993 4073 * * * * * * * * * 477 73 0 * * * * * * 3971 0 0 Y 74 3770 * * * 3289 4338 2832 * * * * * * 3060 * * 4073 3157 * 1544 74 0 * * * * * * 3971 0 0 L 75 3770 * * * 4406 * * 2646 * 1113 4073 * * * * * * 4112 3808 3859 75 0 * * * * * * 3971 0 0 L 76 * * 2797 * * 2361 * * 3022 4352 * 3808 * * 4338 3527 2737 2924 * * 76 0 * * * * * * 3971 0 0 K 77 3770 * 4205 * * * * * 1394 * * 4744 * 3107 2257 4112 3808 * * * 77 0 * * * * * * 3971 0 0 R 78 2732 * * * 3978 * * * 3565 2931 * * * * 2468 * * * 4073 1598 78 0 * * * * * * 3971 0 0 Q 79 3517 * * 2010 2779 * * * 4205 * * * * 4352 1267 * * * * * 79 0 * * * * * * 3971 0 0 D 80 * * 3421 2194 * * * * 4218 3808 4338 1902 * * * 3978 2962 * * 4205 80 0 * * * * * * 3971 0 0 Y 81 * * * 3565 4218 3808 4205 * * * * * * 2683 2870 3859 * * * 1416 81 0 * * * * * * 3971 0 0 M 82 2890 * * * * * 2931 * 4218 4494 2881 * * * 4205 4338 * 3517 * 1694 82 0 * * * * * * 3971 0 0 Y 83 4338 * * 2827 4073 * 3517 * * 1794 * * * * * * * * * 1417 83 0 * * * * * * 3971 0 0 A 84 801 3532 * * 3457 * * * 4138 * 3773 * * 3875 4310 * * * * * 84 0 * * * * * * 4046 0 0 V 85 * * 4034 1716 * 3457 * * 2204 * * * * 3532 5314 * 3000 3475 * * 85 0 * * * * * * 4046 0 0 R 86 4410 * * * * * * * 1700 3519 * * * * 1085 * 3532 * * * 86 0 * * * * * * 4046 0 0 D 87 * * 546 2863 3457 3532 * * * * * * * * * * * * * * 87 0 * * * * * * 4046 0 0 H 88 905 * * * 3958 * 4339 * 3457 * * * 3532 * 2516 * * * * * 88 0 * * * * * * 4046 0 0 D 89 * * 3294 3032 3457 3532 * 3773 * 4310 3537 * * * * * 4125 1906 * 3958 89 0 * * * * * * 4046 0 0 M 90 * * * * * * 3532 2401 * 1878 2140 * * * * 3457 * * * 2898 90 0 * * * * * * 4046 0 0 F 91 * * * 1858 2868 * * * 3773 2991 * * * * 1574 4250 * * * * 91 0 * * * * * * 4046 0 0 S 92 * * 4063 1971 * 2977 975 * * * * * * * * 4339 * * * * 92 0 * * * * * * 4046 0 0 Y 93 * * * * * * * * * * * * * * * * * 3532 * 130 93 0 * * * * * * 4046 0 0 I 94 3457 * * * * * 3532 939 * * 3201 * * * * * * 2379 * * 94 0 * * * * * * 4046 0 0 K 95 * * * 2837 * * * 5314 2202 4310 3457 3958 * 2761 2896 2944 * * * * 95 0 * * * * * * 4046 0 0 S 96 * * * * * * 3328 * * 864 3457 * * * 3010 4339 3532 * * * 96 0 * * * * * * 4046 0 0 H 97 * * * * * * 282 * * * * * 3532 * 3457 * * * * * 97 0 * * * * * * 4046 0 0 P 98 * * * * * * * * 3457 * * * 138 * * * * * * * 98 0 * * * * * * 4046 0 0 E 99 * * 4420 565 * 2494 * * * 4410 * 4250 * * * * * * * * 99 0 * * * * * * 4046 0 0 D 100 * * 259 4250 * 3532 * * * * * * * * * * * * * 5314 100 0 * * * * * * 4046 0 0 F 101 * * * * 0 * * * * * * * * * * * * * * * 101 0 * * * * * * 4046 0 0 P 102 * 3532 3875 3193 * * * * 2991 * * * 1192 3210 * 3958 * * * * 102 193 3000 * 1585 585 * * 4046 1310 0 E 103 4034 * 3875 2514 * * * * 2208 * * 4138 2918 4250 * 2905 4125 4420 * * 103 0 * * * * * * 4046 0 0 K 104 * * * 3135 3782 * * * 2097 4078 * * 1627 * 3868 * 2963 * * * 104 226 2785 * 0 * * * 3868 1595 0 D 105 * * 2677 922 * * * * * * * 4723 * * 3779 3868 3853 3887 * * 105 0 * * * * * * 3868 0 0 K 106 * * * * * 2969 * * 1749 * * * 2648 * 1393 * * * * 4852 106 0 * * * * * * 3868 0 0 K 107 * * * * * * * * 496 * * * * * 2969 * 2617 * * * 107 0 * * * * * * 3868 0 0 T 108 * * 3779 * * * * * 1126 * * * * 3782 4191 3868 1872 * * * 108 0 * * * * * * 3868 0 0 Y 109 * * * * 1611 * * 2972 * 3853 * * * * * * * 4043 * 1268 109 0 * * * * * * 3868 0 0 R 110 1936 * * * * 1331 * * 3704 * * 3806 * * 4124 2883 * * * * 110 153 3312 * 1000 1000 * * 3735 1000 0 E 111 * * 2117 863 * * * * * * * 4720 * 2459 * * * * * * 111 0 * * * * * * 3735 0 0 V 112 * * * 3806 3312 * * 2670 * 2315 * * * * * * * 1090 * * 112 0 * * * * * * 3735 0 0 F 113 * * * * 1471 * * * * 1012 * * * * * * 3759 3844 * * 113 0 * * * * * * 3735 0 0 E 114 * * * 1067 * * * * 2600 3780 * * * 3759 3806 * 3993 3704 * * 114 0 * * * * * * 3735 0 0 E 115 * * 2926 3040 * * * * 2734 * * * 1426 * 3759 2731 * * * * 115 0 * * * * * * 3735 0 0 F 116 * * * * 2079 * * * * * * * * * * * * * 390 * 116 0 * * * * * * 3735 0 0 H 117 * * * * * * 2502 3993 3312 2987 * * * 4045 * * 3124 2147 * 2912 117 0 * * * * * * 3735 0 0 P 118 2825 * * * * * * * * * * * 219 * * * * * * * 118 0 * * * * * * 3735 0 0 V 119 * 3191 * * * * * 1554 * * * * * * 2883 * * 1271 * * 119 0 * * * * * * 3735 0 0 R 120 * * * * * * * * * * * * * * 0 * * * * * 120 0 * * 0 * * * 3735 0 0 //