HHsearch 1.5 NAME c5lnkh_ FAM FILE c5lnkh_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5lnkh_.a3m DATE Thu Feb 9 14:53:12 2017 LENG 95 match states, 95 columns in multiple alignment FILT 25 out of 29 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4569 1.3795 SEQ >ss_dssp CCCCSSHHHHHHHSSSSCCSSCTTCCSSCCCCSCSSCCCCCCCSSCCTTTCCHHHHCCCSCCCCCCCSCCCCCCCCCCSSCCCCCCCCCSSCSCC >sa_dssp DEEBEEDCDEDDEDEDEDEEECEDEEDEEEEEEEEEEEEEEEEECEDEEECEDEEDCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEDEE >ss_pred CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEECCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >ss_conf 93689999999874165434401110444211268888789871131103500102421102786233305653356889885332114667779 >Consensus axatxxixxlRxFlxGrxxxxxxxlRyadisxRTqPxPxLPxGpxhklsxNYYxtRDxRRevxPpxxixxsxxkxxxxpxxxxkxxxlsxdqpyl >c5lnkh_ ASATRLIQGLRNWASGRDLQAKLQLRYQEISKRTQPPPKLPVGPSHRLSNNYYCARDGRREAMPPSIVMSSSEKKAVSPAPPIKRWELSQDEPYL >UniRef50_A7SB58(2-91:101) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SB58_NEMVE E=3e-13 s/c=0.84 id=46% cov=95% AHVTKAMEVLRNFLVGKRL--IVPHRYADlLSKRTQPNPSLPDGPAHKLSANYYCDRDSRRQATPPSVVYSSQKL--LEPKKTGQIEEIKSIQP-- >UniRef50_C4WS88(18-84:110) ACYPI25621 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WS88_ACYPI E=8e-12 s/c=1.07 id=44% cov=72% ------ISALRTFLGGRNFKPNIRM-VDEVSSATQPPPDVPGGPNHTVFNNYYCTRDSRREVTQPVIIFENSSK--------------------- >UniRef50_UPI0000D563A9(9-88:102) PREDICTED: similar to CG3621 CG3621-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D563A9 E=1e-18 s/c=1.18 id=47% cov=81% ------LQKVRDFLLGR--PHTLALRFQDeIATRSPPLPNLPDGPSHCLSSNYYYTRDARREVAPPEIVASGQKLIASGETSPAK----------- >UniRef50_C4Q2F9(10-80:114) Expressed protein n=3 Tax=Schistosoma RepID=C4Q2F9_SCHMA E=2e-17 s/c=1.26 id=41% cov=75% ---TYFMAHVRDFFMGRKYNNC--LRYAEQcSKRTQPLAYLPNGINDKISHNDYFARDGRREVRKSVDIYVSGLKR-------------------- >UniRef50_B4LF91(64-132:232) GJ11644 n=2 Tax=Drosophila RepID=B4LF91_DROVI E=5e-09 s/c=0.90 id=36% cov=61% ------LKLVRDFLLGRK--HVTHHRYADtVSPRTQANPDIPADASTRLFGIQYYLRDARRQMRPP------------------------------ >UniRef50_UPI00006A5859(2-111:113) PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa n=1 Tax=Ciona intestinalis RepID=UPI00006A5859 E=2e-16 s/c=0.79 id=41% cov=96% ---TPIISMLTKYLGVR--RNKMWLRYkEDMSPRTIPKPNLPPGCNSKLSGNYYYTRDARREMAPPVVLAENTSARLTPgvsdssslestqtnlPTPGFS tKWTLSTDQPYL >UniRef50_A9V1E1(12-76:105) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V1E1_MONBE E=3e-10 s/c=1.02 id=34% cov=68% ------------FLAGEKAIMPEHLRFArDVATRSPPKPHLPEGPAHKVSNNAYYMRDNRRAARPVVRDRLSTSAQP------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1851 0 0 S 2 * * * * * * 3097 * * * * 3226 * * * 935 1981 * * * 2 0 * * * * * * 2284 0 0 A 3 700 * * * * * * * * * * * * 2855 * 2952 * 3097 * * 3 0 * * * * * * 2284 0 0 T 4 * * * * * * * * 3337 * * * * * * 2282 524 * * * 4 0 * * * * * * 2586 0 0 R 5 * * * * * 3491 * * 3665 * * * 1856 3390 2064 * 3220 * * 3132 5 0 * * * * * * 2692 0 0 L 6 2117 * * * 1561 * * 3554 * 2618 * * * * * * * 2454 * * 6 0 * * * * * * 2749 0 0 I 7 * * * * * * * 1259 * 1505 3161 * * * * * * 3083 * * 7 0 * * * * * * 2912 0 0 Q 8 3881 * * 3436 * * * * 3877 * * * * 1389 4307 1559 * * * * 8 0 * * * * * * 2912 0 0 G 9 3878 * * * * 4911 3881 * 2432 3877 4037 * * * 2003 3049 * 3436 4214 * 9 0 * * * * * * 2912 0 0 L 10 3830 * * * * * * 2480 * 1229 * * * * * * * 1627 * * 10 0 * * * * * * 2912 0 0 R 11 * * * * * 3830 * * * * * * * * 290 * 4037 4292 * * 11 0 * * * * * * 2912 0 0 N 12 3868 * 1330 * 3830 * * * 4037 * * 1580 * * * * 3878 * * * 12 0 * * * * * * 2912 0 0 W 13 * * * * 386 * * * * * * * * * * * * * 2936 3264 13 0 * * * * * * 3029 0 0 A 14 3536 * * * 2324 4339 * * * 866 * * * * * * 3923 * * 4314 14 0 * * * * * * 3029 0 0 S 15 2856 * * * * 3120 * * * 1527 4034 * 3923 4314 4339 3536 4411 4641 * * 15 0 * * * * * * 3029 0 0 G 16 * * * 3923 * 256 * * 4544 * * * * * * * * 4216 * * 16 0 * * * * * * 3029 0 0 R 17 * * * 4290 * 4491 5085 * 2944 * * * * 5191 584 * 4314 * * * 17 232 * 2751 * * * * 3029 0 0 D 18 4238 * 2594 2478 * * * * 1658 * * 3886 * * 4527 4020 3154 * * * 18 543 * 1672 * * * 0 2906 0 1625 L 19 3218 * * * 3261 * * 3883 * 1710 * 3783 * * 3813 * * * * 1884 19 358 * 2184 * * 1377 701 2740 0 2203 Q 20 * * * * * * * 3310 2503 * * 3441 3393 1724 2580 * * 3930 * * 20 107 * 3808 * * 617 1522 2701 0 2308 A 21 3797 * * * * 4737 1211 * * * 3763 2432 2890 3949 * * * * * * 21 0 * * * * 447 1908 2856 0 1894 K 22 4498 3867 * * * * * 4582 1624 * * 2339 4187 * * * 2708 3115 * * 22 102 * 3867 * * 0 * 3006 0 1000 L 23 * * * 4180 * * * 3968 * 1322 3247 * 4508 * * 4273 2286 3741 * * 23 0 * * * * * 0 2947 0 1000 Q 24 1956 * * * * * 3041 * * * * 3140 4500 2027 3184 4273 * * 4159 * 24 0 * * * * 0 * 2947 0 1000 L 25 * * * * 4544 * 2112 * * 740 4030 3923 * * * * * * * * 25 91 * 4030 * * * * 3029 0 0 R 26 * * * * * * * * * * * * * * 0 * * * * * 26 74 * 4316 * * 0 * 2962 0 1000 Y 27 * * * * 1720 * 4310 * * * * * * * * * * 3870 * 792 27 84 4144 * 0 * 0 * 2999 1000 1000 Q 28 861 * 3264 2599 * * * * * * * * * 2470 * * * * * * 28 386 2092 * 0 * * * 3029 2087 0 E 29 * * 722 1610 * 3923 * * * * * * * * * * * * * * 29 761 1286 * 0 * * * 3029 2246 0 I 30 * * * * * * * 1836 * 2797 3370 * * 2523 * * * 1712 * * 30 91 4034 * 0 * * * 3029 1000 0 S 31 1576 * * * * * * * * * * * * * * 798 * 3482 * * 31 0 * * * * * * 3029 0 0 K 32 4339 * 4035 * * * * * 1612 3923 * * 2367 * 4287 3264 2762 * * * 32 0 * * * * * * 3029 0 0 R 33 4056 * * * * * * * * * * * * * 89 * * * * * 33 0 * * * * * * 3001 0 0 T 34 * * * * * * * * * * * * * * * 2147 369 * * * 34 0 * * * * * * 3001 0 0 Q 35 * * * * * 4622 * 4427 * * * * 2803 458 4579 * * * * * 35 0 * * * * * * 3001 0 0 P 36 4022 * * * * * * * * * * 4610 156 * * * * * * * 36 0 * * * * * * 3001 0 0 P 37 * * 4171 * * * 4247 * 3303 3228 * 3376 1170 3305 * 4579 * * * * 37 0 * * * * * * 3001 0 0 P 38 3429 * * * * * * * * * * * 203 * * * * 4704 * * 38 0 * * * * * * 3014 0 0 K 39 5383 * 2224 4136 * * 3304 4590 2512 * * 2285 * * * 3787 * 4211 * 4172 39 0 * * * * * * 3014 0 0 L 40 * * * * * * * 2194 * 566 * * * * * * * 3237 * * 40 0 * * * * * * 3014 0 0 P 41 * * * * 4261 * * * * * * * 77 * * * * * * * 41 0 * * * * * * 3014 0 0 V 42 4035 * 2087 3449 * 2570 * * * * * 4172 3552 * 4274 3105 * 2888 * * 42 0 * * * * * * 3014 0 0 G 43 * * 4035 * * 91 * * * * * * * * * * * * * * 43 0 * * * * * * 3014 0 0 P 44 4035 4442 * * * * * 3429 * * * * 628 4274 * * * 3300 * * 44 0 * * * * * * 3014 0 0 S 45 2576 * * * 4567 * 4004 * * 4274 * 2307 * * * 1347 4885 * * 4411 45 0 * * * * * * 3014 0 0 H 46 * * 3222 * * * 495 * * * * * * 4885 4567 4442 4035 * * * 46 0 * * * * * * 3014 0 0 R 47 * 4357 * * * * * 5205 929 5070 * * * * 2155 3547 4081 * * * 47 0 * * * * * * 3014 0 0 L 48 * * * * 4274 * * 4172 * 702 * * * * * 3550 * 3142 * 3657 48 61 * 4590 * * * * 3014 0 0 S 49 3675 * * * 2271 * * * * * * 4601 * * * 571 * * * * 49 0 * * * * * 0 2979 0 1000 N 50 2407 * 3294 * * 2698 4086 * 2948 * * 2255 * 4245 * 3256 * * * * 50 0 * * * * * 0 2979 0 1000 N 51 * * * * * * * 4012 * * * 256 * * * 4245 * 4383 * * 51 78 * 4245 * * * 0 2979 0 1000 Y 52 4066 * 3913 * * * * * * * * * * 3906 * * * * * 309 52 0 * * * * 858 1158 2920 0 1427 Y 53 * * * * * * * * * * * * * * * * * * * 0 53 60 4627 * 0 * * 0 2979 1000 1000 C 54 * 1708 * * 3163 * * * * 2812 * * * * * * * * * 1185 54 0 * * * * * 0 2979 0 1000 A 55 2839 * 3729 * * * * * * 4012 4140 * * 5016 * 4121 792 * * * 55 0 * * * * * 0 2979 0 1000 R 56 * * * * * * * * * * * * * * 0 * * * * * 56 0 * * * * 0 * 2979 0 1000 D 57 * * 0 * * * * * * * * * * * * * * * * * 57 0 * * * * * * 3014 0 0 G 58 2029 * * * * 1463 * * * 4638 * 4205 3547 * * 2892 4704 * * 4672 58 0 * * * * * * 3014 0 0 R 59 * * * * * * * * * * * * * * 0 * * * * * 59 0 * * * * * * 3014 0 0 R 60 * * * * * * * * * * * * * * 62 4567 * * * * 60 0 * * * * * * 3014 0 0 E 61 3239 * 4672 897 * 4567 * * * 3080 * 5383 * 3394 * 4704 * * * * 61 0 * * * * * * 3014 0 0 A 62 2683 * * * * * * 4704 * * 2792 * * * * 2888 * 926 * * 62 0 * * * * * * 3014 0 0 M 63 2899 * 5383 * * * * * 3718 5070 5200 * * 2587 1929 * 2539 3212 * * 63 0 * * * * * * 3014 0 0 P 64 5383 * * * * * * * 4172 * * * 404 3174 4211 * * * * * 64 0 * * * * * * 3014 0 0 P 65 4236 * * * 4685 * * * * * * 4559 408 * * 4139 * 4173 * * 65 0 * * * * * * 3004 0 0 S 66 * 4378 * 3292 * * * 2638 2973 * * * * * * 2860 4085 1454 * * 66 0 * * * * * * 3071 0 0 I 67 * 4433 2541 3357 * * 4068 1877 * * * * * * 3840 4278 * 2114 * * 67 0 * * * * * * 3071 0 0 V 68 * * 3840 * * * * 1358 * 2887 * * * * * * * 1305 * * 68 70 * 4404 * * * * 3071 0 0 M 69 2855 * * * 3807 * * * * * 2650 * * * 3647 * 3983 2938 * 1484 69 0 * * * * * 0 2778 0 1000 S 70 * * * 2159 4047 * * * 3983 3647 * * * 3722 * 1311 * 3415 * * 70 0 * * * * * 0 2778 0 1000 S 71 2884 * * 3722 * 3152 * * * * * 2908 * 4192 * 1034 * * * * 71 0 * * * * * 0 2778 0 1000 S 72 * 4797 3649 * * 2784 3722 * * * * * * 1770 * 2532 2342 * * * 72 0 * * * * 0 * 2778 0 1000 E 73 * * * 3435 * * * * 1426 3405 * * * 4161 * 1377 * * * * 73 221 2817 * 3851 104 * * 2762 1320 0 K 74 2615 * * * * * * * 997 2831 * * * 4099 3678 * * 4092 * * 74 102 * 3872 * * * * 2898 0 0 K 75 * * * * * * * 3242 3210 2505 * * 2543 2420 1991 * * * * * 75 0 * * * * * 0 2730 0 1000 A 76 1103 * * * * * * * 3387 3188 * * 1603 * * * * * * * 76 111 3750 * 1585 585 0 * 2597 1000 1000 V 77 2947 * * * * * * * * 1790 * * * * * 3619 2298 1754 * * 77 0 * * * * * * 2564 0 0 S 78 * * * 3100 * 3501 * * * 3288 * * 1793 * * 2678 2013 * * * 78 229 2770 * 3907 100 * * 2451 1000 0 P 79 * * * 3501 * * * * * * * * 378 2816 * * * * * * 79 0 * * * * * * 2451 0 0 A 80 900 * * * * 3149 * * 3100 * * * * * * * 2090 * * * 80 221 2816 * 3170 170 * * 2451 1000 0 P 81 * * * * * * * * 2344 * * * 708 * * 2390 * * * * 81 0 * * * * * * 2451 0 0 P 82 2816 * * * * 2770 * * * * * * 1397 * * 3288 2125 * * * 82 156 3288 * 0 * * * 2451 1000 0 I 83 3501 * * * 2770 3100 * 2018 * * 2261 * * * * * * 3638 * 3149 83 0 * * * * * * 2451 0 0 K 84 * * * * * * * * 467 * * * * 3006 * 2717 * * * * 84 274 2533 * 0 * * * 2396 1000 0 R 85 * * * 2820 * * * 2805 1626 * * * * * 1353 * * * * * 85 240 2705 * 3322 152 * * 2345 1000 0 W 86 2922 * * 2805 * * * * * * 2705 * 2820 * * * * * 1217 * 86 0 * * * * * * 2345 0 0 E 87 * * * 904 * * * * 2705 * * * * * * 2820 2552 * * * 87 0 * * * * * * 2345 0 0 L 88 * * * * * * * 2805 * 464 * * * * * * 2922 * * * 88 0 * * * * * * 2345 0 0 S 89 * * * 2922 * * * * 2805 * * * * * * 464 * * * * 89 0 * * * * * * 2345 0 0 Q 90 * * * * * * * * * * * * * 3441 3538 1489 1103 * * * 90 0 * * * * * * 2345 0 0 D 91 * * 274 * * * * 2530 * * * * * * * * * * * * 91 0 * * * * * * 2177 0 0 E 92 * * * 1834 * * * * * * * * * 475 * * * * * * 92 0 * * * * * * 2177 0 0 P 93 * * * * * * * * * * * * 0 * * * * * * * 93 0 * * * * * * 2177 0 0 Y 94 * * * * * * * * * * * * * * * * * * * 0 94 0 * * * * * * 1940 0 0 L 95 * * * * * * * * * 0 * * * * * * * * * * 95 0 * * 0 * * * 1940 0 0 //