HHsearch 1.5 NAME c5lnkb_ FAM FILE c5lnkb_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5lnkb_.a3m DATE Thu Feb 9 17:31:28 2017 LENG 95 match states, 95 columns in multiple alignment FILT 56 out of 60 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.9 EVD 0.4361 1.2042 SEQ >ss_dssp CCCBCTTSCBCCSSCCCCCTTCGGGGGGTTSCCCCCSSCSHHHHTTSCCEECSSSEEEECSSSTTSSSCCEEEECCCCSSCEECSSSCCEEECCC >sa_dssp EBEEBEDDBDCBEEEDDCEEEDEDDEDCEEEECECEEECEEEDDEEDEDDDCEDDDBDBCCEDEEEECEEDEBEBDEEEEDCDBEEDCCCBCCEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCC >ss_conf 96427888710046756673210001000521143877878885308988834868997088878887637999768998787787651100269 >Consensus xxxxxpxxxxxthtgqxxxxxdyrxxRFxxxxkxvnxxxAieLIxexPpxxVxxrvvxCDGgggxlGHPxvyixldxxxxxxxCxYCglrFxxxH >c5lnkb_ GVRTSPTGEKVTHTGQVYDDEDYRRVRFVGRQKEVNENFAIDLIAEQPVSQVGSRVISCDGGGGALGHPRVYINLDKETKTGTCGYCGLQFRQQH >UniRef50_Q6C8J9(36-136:136) YALI0D19030p n=1 Tax=Yarrowia lipolytica RepID=Q6C8J9_YARLI E=4e-06 s/c=0.52 id=37% cov=96% --KQAPNRDSTWAPAQASKTEIYKNnmVRF--EQKDLSKQpmpyAGIELIAQQPVRFVHGNTAVCDGanhnGPGAQGHPKIFINVDA-PGSHACQYCGTR YEKEH >UniRef50_B4RC83(32-77:101) Putative uncharacterized protein n=18 Tax=Alphaproteobacteria RepID=B4RC83_PHEZH E=9e-06 s/c=1.12 id=48% cov=46% -----------------------------------------------PPEVVTVRsgRIACDGVGGALGHPRVWLEMG-EATFVECPYCDRRF---- >UniRef50_A9UP10(33-98:127) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UP10_MONBE E=2e-18 s/c=1.42 id=42% cov=71% -------------------------QRFINDKKLVNPNWAIDLIHEEPITIVDGKTAV--SGGGPTGHPVEFLNLDQD-KVVICPYSGEFFVRR- >UniRef50_B7G589(71-126:127) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G589_PHATR E=5e-15 s/c=1.46 id=39% cov=60% ---------------------------------------ALELVHKIAPIEVDGEMAICDGGGGALGHPLEYISLARPGTVEYCKYCALRYTQKQ >UniRef50_A8GY88(23-58:63) Putative uncharacterized protein n=13 Tax=Rickettsia RepID=A8GY88_RICB8 E=3e-06 s/c=1.48 id=46% cov=39% --------------------------------------------------------VSCCGKEPPYDHPRVYLEIDKEKKEVSCLYCSKKFR--- >UniRef50_Q41901(54-108:110) NADH ubiquinone oxidoreductase subunit n=16 Tax=Magnoliophyta RepID=Q41901_ARATH E=2e-13 s/c=1.39 id=42% cov=58% ----------------------------------------MELISEVPPIRVDGRIVACEGDtNPALGHPIEFICLDLNA-PAICKYCGLRYVQDH >UniRef50_Q55I93(96-190:194) Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q55I93_CRYNE E=3e-28 s/c=1.32 id=41% cov=99% -LQQSPNVPTTWSTNQNPKPHAYDNARFeqTAWEYQPNRPSAMGMVAEDPVRLVQGRKAACDGGGGALGHPKIFINLDKPGPKV-CGYCGIRFEQAH >UniRef50_D2VG69(68-134:134) NADH dehydrogenase n=1 Tax=Naegleria gruberi RepID=D2VG69_NAEGR E=7e-12 s/c=1.07 id=29% cov=66% --------------------------------KMIDEHFAESIegldLDSLPPIEIDGETAVCNGFHSnGMGHPTEYIRINH-TTPERCKYCGVRYIRKH >UniRef50_C1E3B8(35-137:137) Predicted protein n=2 Tax=Micromonas RepID=C1E3B8_9CHLO E=2e-09 s/c=0.62 id=34% cov=59% ----------------------------------------MEMINEIEPIPIHADRVSCKSKGAcmdrygervGLGAPNTYYQLNSTTKdaPVKCKYCGL RFYGVH # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1068 0 0 V 2 * * * * * * * * * 1665 * * * * * * * 546 * * 2 0 * * * * * * 1866 0 0 R 3 * * * 2441 * * * * 1299 * * * * 2448 2144 * * * * * 3 0 * * * * * * 2218 0 0 T 4 * * * * * * * * * * * * * 1126 * 2441 3142 2031 * * 4 0 * * * * * * 2218 0 0 S 5 1864 * * * * * * * 2441 * * * * * * 886 * * * * 5 0 * * * * * * 2218 0 0 P 6 * * 2601 * * * * * * * * * 474 * * * * 3115 * * 6 0 * * * * * * 2227 0 0 T 7 * * * 3136 * * * * 2601 * * 1235 * * * * 1754 * * * 7 0 * * * * * * 2227 0 0 G 8 * * * * * 1762 * * * * * * * 2601 1437 * * 2547 * * 8 0 * * * * * * 2227 0 0 E 9 * * 1408 1123 * * * * 4012 * * * 3292 * * * * * * * 9 0 * * * * * * 2396 0 0 K 10 * * * 4255 * * * * 1074 * * * 4375 4311 4012 2641 3292 4331 * * 10 0 * * * * * * 2396 0 0 V 11 * * * 3374 * * * 3413 * * * * 4055 * * * 1992 1005 * * 11 0 * * * * * * 2419 0 0 T 12 4404 * * * * * * * * * * * * * * 4055 641 * 1992 * 12 0 * * * * * * 2419 0 0 H 13 2710 * * * * * 538 * * * * 4055 * * * 3343 * * * * 13 0 * * * * * * 2419 0 0 T 14 * * * * * * * * * * * * 2710 4055 * * 345 * * * 14 0 * * * * * * 2419 0 0 G 15 2710 * * * * 538 * * 4055 * * 3343 * * * * * * * * 15 0 * * * * * * 2419 0 0 Q 16 * * * * * * * * * * * * * 89 * * * 4055 * * 16 0 * * * * * * 2419 0 0 V 17 2271 * * * 3436 * * * 2902 * * 3389 * 4598 * * 4255 1405 * * 17 0 * * * * * * 2444 0 0 Y 18 * * * * 2026 * * * * * * * 3389 * * 2766 * * 2373 1649 18 0 * * * * * * 2444 0 0 D 19 * * 1071 2125 * * * * 2044 * * * * * * 4255 * * * * 19 0 * * * * * * 2444 0 0 D 20 3277 * 2960 2525 * * * * 2358 * * * 3389 3255 * * 2766 4255 * * 20 0 * * * * * * 2444 0 0 E 21 * * 1935 2201 * 4092 2888 * 3618 * * 2850 * * * 3224 * * * * 21 0 * * * * * * 2444 0 0 D 22 3389 * 401 * * * * 2766 * * * * * * * * * * * * 22 0 * * * * * * 2444 0 0 Y 23 * * * * * * * * * * * * 4255 * * * * * 3528 216 23 0 * * * * * * 2444 0 0 R 24 * * 3389 * * * * * 2403 * * * * * 593 4255 * * * * 24 0 * * * * * * 2444 0 0 R 25 * * * * * * * * 2485 2449 * 1215 * * 2672 * * 4308 * * 25 209 2891 * 1000 1000 * * 2463 1061 0 V 26 1652 * * * * * * 4922 * * * 4640 * 2915 * * * 1071 * * 26 0 * * * * * * 2588 0 0 R 27 * * * * * * * * * * * * * * 0 * * * * * 27 0 * * * * * * 2497 0 0 F 28 * * * * 0 * * * * * * * * * * * * * * * 28 198 3869 4069 1000 1000 * * 2497 1000 0 V 29 4196 * 4161 3963 * * * 2113 * * * * * * * * 2508 1257 * * 29 0 * * * * * 0 2447 0 1000 G 30 3767 * 2461 * * 2463 * 3443 * * * 1931 * 2691 * * * 4196 * * 30 0 * * * * 0 * 2447 0 1000 R 31 2571 * 3575 4069 * 3857 * * 2237 * * * * * 1814 4205 * * 3869 * 31 127 3571 * 1000 1000 * * 2497 1122 0 Q 32 * * 2939 3196 * * * 4804 1565 * * * * 1686 * 4722 4717 * * * 32 148 3363 * 1000 1000 * * 2497 1296 0 K 33 4791 * * 4699 * * * * 364 * * * * * 3521 * * * * 4025 33 0 * * * * * * 2733 0 0 E 34 * * 4281 2206 * * * * * 2608 3172 * * 1803 * 4352 * 4871 * 3521 34 0 * * * * * * 2733 0 0 V 35 * * * * * * * 3172 * 4281 * * 2175 * * * * 699 * * 35 0 * * * * * * 2733 0 0 N 36 * * 3189 * * * * * * * 4660 546 * * 3113 4320 * * * * 36 0 * * * * * * 2730 0 0 E 37 * * 4918 1526 * * * * 3672 * * * 1129 5052 4208 * * * * * 37 0 * * * * * * 2730 0 0 N 38 * * * * * * 2850 * * 5140 * 1043 4208 3208 * 5052 * * * 2688 38 74 4320 * 2000 415 * * 2730 1000 0 F 39 2285 * * * 1398 * * 4918 * * * * * * * 3600 * 4391 1988 * 39 0 * * * * * * 2730 0 0 A 40 205 * * * * 2913 * * * * * * * * * * * * * * 40 0 * * * * * * 2905 0 0 I 41 5855 * * 2973 * * * 1046 * 3539 2047 * * * * * * 4539 * * 41 0 * * * * * * 3086 0 0 D 42 5794 * 2082 1189 * 5459 5229 * 2733 * * 4711 * * * 3853 * * * * 42 0 * * * * * * 3086 0 0 L 43 * * * * 4543 * * 3853 * 386 3025 * * * * * * * * * 43 103 3853 * 2000 415 * * 3086 1000 0 I 44 * * * * * * * 273 * 3904 * * * * * * * 3247 * * 44 0 * * * * * * 3106 0 0 A 45 1354 * 2655 5863 * * 2280 * 5974 * * 3336 * 5364 * 3898 * * * 5600 45 0 * * * * * * 3165 0 0 E 46 * * * 989 * * * * 2242 * * 4973 * 2597 5364 3981 * * * * 46 0 * * * * * * 3165 0 0 Q 47 * * 5553 2782 4674 * * 2149 * 3583 * * * 2029 5288 * * 2452 * 4973 47 0 * * * * * * 3165 0 0 P 48 4565 * * 2980 * * * * * 5886 * * 297 * * * * * * * 48 0 * * * * * * 3245 0 0 V 49 5848 * * * * * * 2731 * 5109 * * 1009 * * * 4876 1878 * * 49 43 5082 * 1000 1000 * * 3316 1000 0 S 50 * * * 3557 * * * 1363 3294 * * 5814 * 5445 2515 3632 4562 3543 * * 50 0 * * * * * * 3234 0 0 Q 51 5102 * 5756 1643 3926 4615 * 4562 4381 4397 * * 3640 3532 4874 * * 3925 3865 4247 51 47 4958 * 1000 1000 * * 3234 1000 0 V 52 * 3966 * * * * * 3260 * 4055 * * * * * 4134 3616 660 * * 52 102 3875 * 921 1084 * * 3465 1650 0 G 53 4691 * 2012 2859 * 4100 2678 * 4096 * * * 4605 3359 5784 3793 3763 * * * 53 0 * * * * * * 3480 0 0 S 54 4347 * 4292 3155 * 1504 * * 4560 * * * * 4391 * 2113 3494 5325 * * 54 0 * * * * * * 3480 0 0 R 55 * * 2749 3977 * * 4466 * 3682 * * 2954 * * 1009 6146 * 5345 * * 55 36 5325 * 1000 1000 * * 3480 1000 0 V 56 * * * * * * 5268 2671 3520 * 4392 * * * 2753 7275 2616 1457 * * 56 0 * * * * * * 3480 0 0 I 57 1959 * * * * * * 2877 * 5217 * * * * * * 4274 921 * * 57 0 * * * * * * 3230 0 0 S 58 1932 5183 * * 5560 * * 5488 * * * * * * 4746 1435 * 2139 6152 5733 58 51 * 4857 * * * * 3230 0 0 C 59 * 0 * * * * * * * * * * * * * * * * * * 59 0 * * * * * 0 3205 0 1000 D 60 * 4500 375 5006 * * * * 4369 4732 * 3887 * * * * * * * * 60 0 * * * * 0 * 3205 0 1000 G 61 * * * * * 182 * * * * * * * * * 3080 * * * * 61 82 4172 * 2071 392 * * 3230 1341 0 G 62 5682 * 4173 * 4888 609 * * 3489 * * 4531 4110 * 6525 * * 4848 * * 62 188 3032 * 1257 782 * * 3230 2104 0 G 63 5299 * 4407 3489 * 887 3607 * * 5216 * 3493 4221 * 5054 5971 * * * * 63 134 3491 * 3581 126 * * 3230 1554 0 G 64 3193 * * 5493 * 634 * 4706 * * * 5249 3147 * * 4425 * * * * 64 124 3600 * 2189 357 * * 3171 1568 0 A 65 1113 * * * * 2397 * * * * * 4706 1847 * * 4990 * * * * 65 40 5208 * 2037 403 * * 3171 1399 0 L 66 4177 * * 5723 * * * * * 488 4833 * * 3938 * * 3876 * * 4490 66 23 5977 * 1000 1000 * * 3171 1000 0 G 67 * * 4514 * * 65 * * * * * * * * * * * * * * 67 0 * * * * * * 3230 0 0 H 68 3578 * * * * * 126 * * * * * * * * * * * * * 68 75 4307 * 3585 126 * * 3230 1000 0 P 69 * * * * * * * * * * * * 75 * * 4307 * * * * 69 0 * * * * * * 3230 0 0 R 70 * * * * * * * 5055 1756 3981 5968 3578 * 4745 1575 4307 4885 4223 * * 70 0 * * * * * * 3230 0 0 V 71 * * * 2656 * * * 2948 * 4307 * * * * * * 3578 792 * * 71 0 * * * * * * 3230 0 0 Y 72 * * * * 1796 * * * * * * * * 4307 * * * * 2908 921 72 0 * * * * * * 3230 0 0 I 73 * 4307 * * * * * 945 * 1796 5497 * * * * * * * * 3062 73 0 * * * * * * 3230 0 0 N 74 * 5055 4395 2718 * * * * 3220 4307 5956 1357 * 3958 3619 4622 5677 * * * 74 0 * * * * * * 3230 0 0 L 75 * * * * * * * 2102 * 820 3432 * * * * * 4184 4238 * * 75 19 * 6274 * * * * 3230 0 0 D 76 3637 * 696 * * 2758 * * * * * 3153 5703 * * * 5444 * * * 76 266 3172 4129 857 1158 * 0 3185 1959 1000 K 77 3066 * 4123 5564 * * 3648 * 1535 5016 * * 4539 3087 4278 3661 4181 * * * 77 109 * 3777 * * 452 1894 3157 0 1703 E 78 4672 * 2998 1743 * * 3578 * * * * 4342 1475 * * * 4507 * * * 78 278 * 2514 * * 0 * 3085 0 2189 T 79 4292 * 4598 4126 * 1168 * 5373 4326 * * 4542 5368 4684 * * 2150 * * * 79 480 * 1821 * * 0 * 3107 0 2353 K 80 * * 4371 3351 * 3215 * 5332 1405 * * * 4251 5247 4578 4448 2498 * * * 80 115 4262 5357 1000 1000 0 * 3196 1000 2269 T 81 4341 * * 4103 2767 * 5563 3633 4875 * * 4037 1959 5843 5754 4756 3576 3609 * 4244 81 85 * 4128 * * 0 * 3181 0 1000 G 82 2726 * * 3902 * 3535 2451 4806 * * * * * 4119 6229 * 5722 1369 * * 82 56 * 4710 * * 666 1436 3135 0 1553 T 83 2920 * 3964 2878 * * * 3596 3672 * 5561 * 3610 * 4715 3348 2194 5769 * 5041 83 0 * * * * 0 * 3130 0 1693 C 84 * 0 * * * * * * * * * * * * * * * * * * 84 0 * * * * * * 3180 0 0 G 85 * * * * * 1233 * * 2055 4033 * 5934 2465 4769 * 5696 * 5679 * * 85 0 * * * * * * 3180 0 0 Y 86 * * * * * * * * * * * * * * * * * * * 0 86 0 * * * * * * 3180 0 0 C 87 * 58 * * * * * * * * * * * * * 4672 * * * * 87 0 * * * * * * 3180 0 0 G 88 5010 * 2373 * * 535 * * * * * * * * * 3546 * * * * 88 0 * * * * * * 3136 0 0 L 89 * * * 4616 * * * 4319 3846 994 * 6100 * 6201 2257 * 4694 4026 * * 89 0 * * * * * * 3136 0 0 Q 90 * * * * 4616 * * * 3196 4768 * * 4039 2884 696 * * * * * 90 0 * * * * * * 3136 0 0 F 91 * * * * 499 * * * * * * * * * * * * * * 1775 91 36 5336 * 1222 808 * * 3136 1275 0 R 92 3068 * * 3184 5751 * * 3746 2980 * * * * 5185 3060 * 4706 2139 * 2855 92 0 * * * * * * 3409 0 0 Q 93 4849 * * * * 3781 3760 * 1718 5347 4986 3850 * 1793 3312 * * * * * 93 0 * * * * * * 3284 0 0 Q 94 5126 * 3791 2459 * * 4796 * 1440 * * * * 2925 4324 4241 * 3675 * * 94 0 * * * * * * 3277 0 0 H 95 * * * * * * 125 * * * * * * 3591 * * * * * * 95 0 * * 0 * * * 2898 0 0 //