HHsearch 1.5 NAME c5ldwg_ FAM FILE c5ldwg_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5ldwg_.a3m DATE Thu Feb 9 20:02:26 2017 LENG 97 match states, 97 columns in multiple alignment FILT 18 out of 22 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.3854 -1.6851 SEQ >ss_dssp CCTTCCCCCCCCCTTTTTSSCSSSSCHHHHHHHHTTHHHHHHHHTTTSSSSSTTSSSCCTTTTHHHHHHHHHHHHHHHHCSSCSCSSTTCSSCCCCC >sa_dssp ECDDDEDEDEDEDDCDECDECEBEDDEEEADEDCDDDEEEDEDDEEEECEDEEDEEECDEEEEDDEECDEEDEEEDEEDDEDDDDEDEEDEEDEDEE >ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC >ss_conf 9864667234345653763358776637899999999999999999999999998068660248999999999999984898637110898880379 >Consensus xxxxxxxxexexxxxknwxSyGfdkDxxxDxxxmhxxxFfxvtixlvxgxxxxxYlPDxxxrdWaxREAxlxlxxRExxGLplIdxNxiDPskixLP >c5ldwg_ RWQEDPEPEDENLYEKNPDSHGYDKDPAVDIWNMRVVFFFGFSIVLVLGSTFVAYLPDYRMQEWARREAERLVKYREAHGLPIMESNCFDPSKIQLP >UniRef50_UPI0000518497(42-133:145) PREDICTED: similar to NP15.6 CG6008-PA isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000518497 E=2e-30 s/c=1.45 id=42% cov=93% --------EKEDLYEIKdaWASYGFDtKNKEIDRQAMHITFFTCISVVLVFGALIIGYAPDPLLKDWAQREAYLQLRHREENGLPLIDPNLIDPSKFTLP >UniRef50_Q9V3L7(56-138:150) NP15.6 n=11 Tax=Drosophila RepID=Q9V3L7_DROME E=2e-29 s/c=1.57 id=39% cov=86% ---------------KNWQSYGFDyKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDTQFRNWAQREGFLELRRRELAGVDLVSPNYVDPASITLP >UniRef50_C1BPZ7(48-134:146) NADH dehydrogenase 1 beta subcomplex subunit 11, mitochondrial n=1 Tax=Caligus rogercresseyi RepID=C1BPZ7_9MAXI E=5e-28 s/c=1.44 id=37% cov=86% ---------------KHWTSYGYDEDNQKQDKLMMNFACFLFMFIFAYGSFWLYYLPDYKYRDWSLREAYIVLNQRERAGLPPVDKNFIDPALIELP >UniRef50_C4QIW5(55-153:166) Expressed protein n=4 Tax=Schistosoma RepID=C4QIW5_SCHMA E=4e-12 s/c=0.73 id=28% cov=81% -------------------STGYHQtDKNEDISLSQLVPFALLTLWIFPLFLYLYYSPNRSFSDWTWREAYLEIERRRRDGLPLVDKDLIPASRVQLP >UniRef50_A8Q076(82-167:179) GH05862p, putative n=4 Tax=Chromadorea RepID=A8Q076_BRUMA E=2e-10 s/c=0.77 id=32% cov=62% --------------------------------------FVLLTVMVSWVTLYILYaAPDwPQARDWAYREAHLEMARREKAGLPYISKDLIRPDKIVLP >UniRef50_UPI000186D4B9(58-142:158) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186D4B9 E=3e-26 s/c=1.40 id=36% cov=86% ---------------KNWISYGYNyHDKEDDRFRMHVSCFCIVTIGFVCTGFLYLYSPSTQNRSWFQREAFIRLHEREQLGLDPIDPNYVDPSKINLP >UniRef50_B7PGT5(62-143:155) Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7PGT5_IXOSC E=4e-24 s/c=1.37 id=40% cov=80% -------------------SYGYSEtDYTMDRDYHHLVMFFGVTFMLGLG-FIMMYIPDFRDLDWTEREAYLRLERREKLGLPKIDRNLVDPSRLTLP >UniRef50_UPI00006A76CB(66-158:194) PREDICTED: similar to NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial precursor (NADH-ubiquinone oxidoreductase ESSS subunit) (Complex I-ESSS) (CI-ESSS) n=1 Tax=Ciona intestinalis RepID=UPI00006A76CB E=1e-19 s/c=1.05 id=38% cov=87% ------EIECERFFDKeKPETFlGFDRfDPLYDKVIAHVIMFFGFSVFLVFIPAMMIYGPDYRSRmiEWREYEAITLLEERQANGQPPIDPDFV------ -- >UniRef50_UPI0000587DEF(82-159:169) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587DEF E=1e-14 s/c=0.90 id=46% cov=81% -------------------THGFHDDPYWDTYAYRVIFFTTISIVMVFGPAFVHYLPDPTGREWARKEALVVLDERRAAGALVIDPNFIDPSKLVLP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 1615 * * * * * * * * * * * 2185 2162 2119 * * * * * 1 0 * * * * * * 1383 0 0 W 2 * * * * * * * * 1615 * * * * * * * * * 570 * 2 0 * * * * * * 1383 0 0 Q 3 * * 1615 * * * * * * * * * * 570 * * * * * * 3 0 * * * * * * 1383 0 0 E 4 * * * 570 * * * * * * * * * * * 1615 * * * * 4 0 * * * * * * 1383 0 0 D 5 * * 570 * * * 1615 * * * * * * * * * * * * * 5 0 * * * * * * 1383 0 0 P 6 * * * * * * 1615 * * * * * 570 * * * * * * * 6 0 * * * * * * 1383 0 0 E 7 * * * 371 * 2140 * * * * * * * * * * * * * * 7 0 * * * * * * 1790 0 0 P 8 * * * * * * 2140 1684 * * * * 1114 * * * * * * * 8 0 * * * * * * 1790 0 0 E 9 2515 * * 277 * * * * * * * * * * * * * * * * 9 0 * * * * * * 2077 0 0 D 10 * 2062 1486 2515 * * * * 2130 * * * * * * * * * * * 10 0 * * * * * * 2077 0 0 E 11 * * * 411 * * * * * * * * * 3342 * * * 2743 * * 11 0 * * * * * * 2264 0 0 N 12 * * 2606 * * * * * 2495 * * 1721 * * 2282 2743 * * * * 12 0 * * * * * * 2264 0 0 L 13 2743 * * * 2282 * * * * 1096 * * * * * * * 2495 * * 13 0 * * * * * * 2264 0 0 Y 14 * * * 2495 2282 * * * * * * * * * * * * * * 697 14 0 * * * * * * 2264 0 0 E 15 * * 2450 893 * * 2905 * 2784 * * * * * * * * * * * 15 0 * * * * * * 2366 0 0 K 16 * * * 4588 * * * 3604 325 * * * * * 3687 * * * * * 16 180 3089 * 0 * * * 2927 1000 0 N 17 * * * * * * 3091 * 2323 * * 550 * * * * * * * * 17 124 3604 * 1000 1000 * * 2927 1000 0 P 18 * * * * * * * * * * * * 1325 * * * * * 735 * 18 0 * * * * * * 2927 0 0 D 19 3604 * 1828 3089 * * * 3302 * * * * * 2669 * * 3091 2810 * * 19 0 * * * * * * 2927 0 0 S 20 * * * * * * * * * * * * * * * 355 2683 * * 4000 20 0 * * * * * * 3332 0 0 H 21 * * * * 3633 * 1823 * * * * * * * * * 3449 * * 875 21 121 3633 * 0 * * * 3332 1000 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 3332 0 0 Y 23 * * * * 801 * * * * * * * * * * * * * * 1231 23 0 * * * * * * 3332 0 0 D 24 * * 1012 4141 * * 2374 * * * * 3725 * * * 2484 * * * * 24 498 1776 * 0 * * * 3332 1951 0 K 25 * * 3734 2347 * * 3725 * 1352 * * * 5251 3449 2805 * * * * * 25 381 2108 * 0 * * * 3332 2016 0 D 26 * * 344 4147 * 4470 * * * * * 4179 * * * 4182 * * * * 26 0 * * * * * * 3332 0 0 P 27 * * 4141 4182 * * * * 1902 * * 3638 1461 4037 * 4147 * * * 4065 27 0 * * * * * * 3332 0 0 A 28 4529 * * 1790 5251 * * * 4182 3633 * 3449 * 3638 * * 4065 2330 * 3734 28 173 3144 * 0 * * * 3332 1424 0 V 29 * * 3725 1920 * * * 4179 3638 2661 4065 * * * * 4470 * 3240 3734 3633 29 0 * * * * * * 3332 0 0 D 30 * * 121 * * * * * * * * * * 3638 * * * * * * 30 0 * * * * * * 3332 0 0 I 31 * * 3638 * * * * 2891 3633 3592 * * * * 1293 * 3734 2858 * * 31 0 * * * * * * 3332 0 0 W 32 * * 3122 * 3725 * 4147 * 2824 * * 4141 * 4179 * 3449 4470 3633 2269 3734 32 0 * * * * * * 3332 0 0 N 33 1771 * * * 4147 * * 3633 * 2541 * 2269 * * 3725 4182 * * * 4065 33 0 * * * * * * 3332 0 0 M 34 3633 * * * * * 4065 * * * 662 * * * * 3449 4037 * * 3734 34 0 * * * * * * 3332 0 0 R 35 * * * * * * 1045 * 4037 * 3638 * * 3449 1823 * * * * * 35 0 * * * * * * 3332 0 0 V 36 4141 * * * * * * 4179 * 1837 4147 3638 * * * 2634 * 1688 * * 36 0 * * * * * * 3332 0 0 V 37 4000 * * * 2870 * * 2316 * * * * * * * 2935 2533 1755 * * 37 0 * * * * * * 3332 0 0 F 38 3638 3725 * * 1140 4141 * * * * 2430 * 3449 * * * 4147 * * * 38 0 * * * * * * 3332 0 0 F 39 * 3699 * * 197 * * * * 4311 * * * * * * * * * * 39 0 * * * * * * 3386 0 0 F 40 2986 3355 * * 1028 * * 4205 * * * * * * * * 3010 3219 * * 40 0 * * * * * * 3386 0 0 G 41 * 4258 * * * 1583 * 3798 * 2241 * * * * * 2719 2485 * * * 41 0 * * * * * * 3386 0 0 F 42 * * * * 2350 * * 1767 * 2895 * * * * * * * 1412 * * 42 0 * * * * * * 3386 0 0 S 43 * * * * * * * * * * 3699 * * * * 1133 1099 * * * 43 0 * * * * * * 3386 0 0 I 44 * * * * 2446 * * 2002 * 2074 * * * * * * * 1602 * * 44 0 * * * * * * 3386 0 0 V 45 4049 2291 * * 3692 3798 * 3117 * * 3222 * * * * * 5273 1976 3583 * 45 0 * * * * * * 3386 0 0 L 46 * * * * 2300 * * 2331 * 1073 3798 * * * * * * 4292 * * 46 0 * * * * * * 3386 0 0 V 47 3699 * * * 3583 3180 * * * * * * * * * 4292 * 560 * * 47 0 * * * * * * 3386 0 0 L 48 * 3125 * * 1989 4187 * 4205 * 2351 * * 3583 * * * * 4049 3219 3699 48 0 * * * * * * 3386 0 0 G 49 * * * * * 481 * 3692 * 3583 * * * * * * 3798 4292 * * 49 83 * 4155 * * * * 3386 0 0 S 50 4190 * * * 3498 2441 * 4114 * * * * 2678 * * 1514 3204 * * * 50 0 * * * * 0 * 3341 0 1000 T 51 2744 * * * 1447 * * * * 2421 * * * * * * 2519 5273 * 3366 51 0 * * * * * * 3386 0 0 F 52 * * * * 1832 * * 2620 * 3798 2918 * * * * * * * 3699 1861 52 0 * * * * * * 3386 0 0 V 53 * * * * 4187 * * 2610 * 2220 2504 * * * * * * 2239 3228 3798 53 0 * * * * * * 3386 0 0 A 54 1730 * * * * 4258 2918 2925 * 3024 3338 * * * * * * * * 2640 54 0 * * * * * * 3386 0 0 Y 55 * * * * * * * * * * * * * * * * * * * 0 55 76 4292 * 0 * * * 3386 1000 0 L 56 2775 * * * * 3692 * 4155 * 971 4187 * * * * 2687 * * * * 56 0 * * * * * * 3386 0 0 P 57 * * * * * * * * * * * * 0 * * * * * * * 57 0 * * * * * * 3386 0 0 D 58 * * 244 * * * * * * * * 3583 * * * 3798 * * * * 58 76 4292 * 0 * * * 3386 1000 0 Y 59 * * * * 3180 * 4049 * * * * * 2148 * 3583 * 2963 * * 1351 59 0 * * * * * * 3386 0 0 R 60 * * * * * 4049 * * 3699 4258 * 3356 * 2122 1610 3583 3798 * * * 60 0 * * * * * * 3386 0 0 M 61 4292 * 4155 * 2839 3355 * * * 2782 2129 3798 * * * 3692 * * * 2922 61 0 * * * * * * 3386 0 0 Q 62 * * * * * * * * 2170 4155 * * * 3083 943 3583 * * * * 62 119 3654 * 1000 1000 * * 3386 1000 0 E 63 * * 1050 1938 * * * * * * * 3047 * 3982 * 3800 * * * * 63 0 * * * * * * 3239 0 0 W 64 * * * * * * * * * * * * * * * * * * 0 * 64 0 * * * * * * 3239 0 0 A 65 1318 * * * 3800 3981 * * * * * * * * 3822 2017 2776 * * * 65 0 * * * * * * 3239 0 0 R 66 * * * 2386 * * * * * 2917 * * * 1844 1980 * * * 3493 4171 66 0 * * * * * * 3239 0 0 R 67 * * * * * * * * 3798 * * * * * 222 * * * * 3822 67 0 * * * * * * 3239 0 0 E 68 * * * 0 * * * * * * * * * * * * * * * * 68 0 * * * * * * 3239 0 0 A 69 86 * * * * 4117 * * * * * * * * * * * * * * 69 0 * * * * * * 3239 0 0 E 70 * * * 2461 2085 * 4171 3822 * 3798 * * * * * * * * * 1378 70 0 * * * * * * 3239 0 0 R 71 * * * * * * * 2755 * 922 * * * * 2461 * 3822 3798 * * 71 0 * * * * * * 3239 0 0 L 72 * * * 1262 * * * * * 1987 * * * 4220 2954 * * 2754 * * 72 0 * * * * * * 3239 0 0 V 73 * * * * * * * 3493 * 569 4171 * * * * * * 2461 * * 73 0 * * * * * * 3239 0 0 K 74 4171 * 3798 2206 * * 3800 * 2461 * * 3712 * * 1616 * * * * * 74 0 * * * * * * 3239 0 0 Y 75 * * * 2222 * * 4220 * * * * * * 2841 1077 * * * * 3080 75 0 * * * * * * 3239 0 0 R 76 * * * * * * * * * * * * * * 0 * * * * * 76 0 * * * * * * 3239 0 0 E 77 * * * 380 * * * * * * * * * 3822 2638 * * * * * 77 0 * * * * * * 3239 0 0 A 78 1408 * 3981 4220 * * * * 2684 4117 * * * 2967 2599 * * * * * 78 0 * * * * * * 3239 0 0 H 79 1671 * 3493 3982 * * 4538 * * 2954 4543 2325 * 3981 * 4157 * * * * 79 0 * * * * * * 3239 0 0 G 80 * * * * * 0 * * * * * * * * * * * * * * 80 0 * * * * * * 3239 0 0 L 81 3798 * * * * * * * * 322 * * * 3822 * * * 4117 * * 81 0 * * * * * * 3239 0 0 P 82 3982 * 2950 4249 * * * * * 3798 * * 550 * * * * * * * 82 0 * * * * * * 3239 0 0 I 83 * * * * * * * 3595 4127 1117 * * 1882 * * * * 3798 * 4171 83 0 * * * * * * 3239 0 0 M 84 * * * * * * * 618 * * 3595 * * * * * * 1913 * * 84 0 * * * * * * 3239 0 0 E 85 * * 616 2461 * * * * * * * * * * * 2593 * * * * 85 0 * * * * * * 3239 0 0 S 86 * * * 3982 * * * * 1872 * * * 1035 * 4127 3080 * * * * 86 0 * * * * * * 3239 0 0 N 87 * * 1902 * * * * * * * * 449 * * * * * * * * 87 0 * * * * * * 3239 0 0 C 88 * 3595 * * 1881 * * * * 1746 * * * * * * * 4157 * 1778 88 0 * * * * * * 3239 0 0 F 89 * * * * 3080 * * 834 * * * * * * * * * 1958 * 3982 89 0 * * * * * * 3239 0 0 D 90 * * 361 * * * * * * * * * 3395 3880 4092 * * * * * 90 0 * * * * * * 3142 0 0 P 91 3395 * * * * * * * * * * * 255 * * 3897 * * * * 91 0 * * * * * * 3142 0 0 S 92 1724 * 4092 * * * 3880 * * * * * * * * 809 * * * * 92 0 * * * * * * 3142 0 0 K 93 * * * * * * * * 792 2757 * * * 4160 2668 4029 * * * * 93 0 * * * * * * 3142 0 0 I 94 * * * * 4150 * * 803 * 2757 3880 * * * * * * 2695 * * 94 0 * * * * * * 3142 0 0 Q 95 * * * 3644 * * * 4073 * * * 3705 * 1570 * * 2475 1903 * * 95 0 * * * * * * 3142 0 0 L 96 * * * * * * * * * 0 * * * * * * * * * * 96 0 * * * * * * 3142 0 0 P 97 * * * * * * * * * * * * 0 * * * * * * * 97 0 * * 0 * * * 3142 0 0 //