HHsearch 1.5 NAME c5ldwe_ FAM FILE c5ldwe_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5ldwe_.a3m DATE Thu Feb 9 20:04:19 2017 LENG 89 match states, 89 columns in multiple alignment FILT 35 out of 39 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.9 EVD 0.4597 0.9746 SEQ >ss_dssp CCSCCCSSCCCCCSSSCCCSSSCCCTTHHHHHHHHHHSSSHHHHTTTSTTHHHHHHHHHHHTCHHHHHHHHHHHHHHHHCTTSCCCCCC >sa_dssp EEDEEEEDEDDDEDCCEECEDDDEDDBDECBDDDDECCEDEEBDDECCDBEECCEDCECBEEDDECEEEEEDEEEEEEEDDECECDEEE >ss_pred CCCCCCCHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >ss_conf 97323231352100133441246774259999999999863034467863688999999720199999999999999997417667898 >Consensus xxxxxxxxxxwxxxxxxxxxxxxxxRCxxFexexxxCxxayGxxxgxkeCxxxxeDyxEClhhxKexxRxxxIxxerxKxxkEGxxxxP >c5ldwe_ QKRLGVDLDRWMTIQSAEQPHKIPSRCHAFEKEWIECAHGIGSIRAEKECKIEFEDFRECLLRQKTMKRLHAIRRQREKLIKEGKYTPP >UniRef50_B7QEB9(11-65:77) Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7QEB9_IXOSC E=0.0002 s/c=0.85 id=33% cov=55% -------------LTSSFENYEAVKRCRDFNMQLSLCKEAYGLHRSDKMCRDEYEDFRECI---------------------------- >UniRef50_Q5DDL6(83-157:166) Hypotheticial protein n=2 Tax=Schistosoma japonicum RepID=Q5DDL6_SCHJA E=4e-16 s/c=1.14 id=31% cov=73% ----------WFTMQNLFHP----KFCQIMERDFFRCVSRVGLQNTDKLCKIYWEDLLECQTHDKAKKRALMMEKVRK----------- >UniRef50_A8WWD5(22-99:121) C. briggsae CBR-NDUF-5 protein n=2 Tax=Caenorhabditis RepID=A8WWD5_CAEBR E=8e-16 s/c=1.09 id=38% cov=72% --------------------------CGFFESQFYRCMEAYGAKMGRKYCDLEHRDYQECITGDKQKKRAEAIAAQRRKLFLEGKLDSP >UniRef50_UPI000186E298(31-93:109) NADH-Ubiquinone oxidoreductase 15KDa subunit n=1 Tax=Pediculus humanus corporis RepID=UPI000186E298 E=2e-14 s/c=1.27 id=32% cov=64% ---------------------------------YIDCIEAYGATKGSRECAAILFDSMECTHHTFQLKRRDAIYKERMKQYREGKIDKP >UniRef50_B6H1H4(28-96:157) Pc13g02320 protein n=16 Tax=Leotiomyceta RepID=B6H1H4_PENCW E=2e-13 s/c=1.11 id=25% cov=66% -----------------------PGRCYPFWQEVLGCYvvNSGDGASGKKKCVPALDDYYECLHHRKEALRTMKMQAAYRKAE-------- >UniRef50_B0DBK0(12-76:101) Predicted protein n=2 Tax=Agaricales RepID=B0DBK0_LACBS E=3e-11 s/c=1.07 id=26% cov=70% ------------------------SRCFTYWQEFQKC---YAQTDNPIECRPQSRDYLECLHHPQEVTRAKIVQEEFIRKVehsaKEGRKTA- >UniRef50_A7S2C3(5-72:79) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S2C3_NEMVE E=0.0006 s/c=0.66 id=37% cov=73% ------------------------SRCSPFWEQLMDCAQQAGRRSQWEKCQHPREDYIECLHHRKLYTRIERIEKEKEKLKKEGKWPP- >UniRef50_UPI0000D567AF(14-88:101) NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) n=1 Tax=Tribolium castaneum RepID=UPI0000D567AF E=6e-17 s/c=1.18 id=32% cov=84% -------------ITGAILSHQWGGRCADMELRALDCLEAYGLDRGIKKCETLITDFQECALRTKELARYSAMKAERDRQYKAGERT-- >UniRef50_A4S5C5(1-67:95) Predicted protein n=3 Tax=Mamiellales RepID=A4S5C5_OSTLU E=1e-08 s/c=0.91 id=26% cov=64% ------------------------GRCAPVWREFTKCVNE---ADDRSACFKFREDYVECLHHKKEYRRENEIENERQRRNEE------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * * * * * * * * * * * 0 * * * * * * 1 0 * * * * * * 1697 0 0 K 2 * * * * * 2341 * * 797 * * * * * * 2138 * * * * 2 0 * * * * * * 1697 0 0 R 3 * * * * * * * * 1236 * * * * * 797 * * * * * 3 0 * * * * * * 1697 0 0 L 4 * * * * 1683 * * * * 935 * * * * * * * 2594 * * 4 0 * * * * * * 1889 0 0 G 5 * * * * * 0 * * * * * * * * * * * * * * 5 0 * * * * * * 1889 0 0 V 6 * * * * * * 2103 1687 * 1683 * * * * * * * 2785 * * 6 0 * * * * * * 1889 0 0 D 7 * * 2785 * * * * * 2103 * * 685 * * * * * * * * 7 0 * * * * * * 1889 0 0 L 8 * * * * * * * 1738 * 2785 2786 * * * * * 2496 * 2103 * 8 0 * * * * * * 1889 0 0 D 9 * * 0 * * * * * * * * * * * * * * * * * 9 0 * * * * * * 1889 0 0 R 10 * * * * * 2496 2103 * 1687 * * * * * 1840 * * * * * 10 0 * * * * * * 1889 0 0 W 11 * * * * * * * * * * * * * * * * * * 0 * 11 0 * * * * * * 2275 0 0 M 12 * * * * 2084 * * * * 1447 1332 * * * * * * * * * 12 0 * * * * * * 2275 0 0 T 13 * * * * * * * * * 1255 * * * * * * 783 * * * 13 0 * * * * * * 2275 0 0 I 14 * * * * * * * 1070 * 2132 2632 * * * * 2898 * * * * 14 0 * * * * * * 2907 0 0 Q 15 * * * * * 2898 * * * * * * * 810 * * 1759 * * * 15 0 * * * * * * 2907 0 0 S 16 2898 * * * * 2104 * * * * * 2632 * * * 1083 * * * * 16 0 * * * * * * 2907 0 0 A 17 1608 * * * * 2753 * * * 2632 * * * * * 1465 * * * * 17 0 * * * * * * 2907 0 0 E 18 * * * 1639 1730 * * 2688 3506 * * * * * * 2898 * * * * 18 0 * * * * * * 2907 0 0 Q 19 * * 2898 2834 * * 2632 * * 2688 * * * 1289 * * * * * * 19 0 * * * * * * 2907 0 0 P 20 * * * 2898 * * * * * * * 2834 810 * * 2688 * * * * 20 254 * 2632 * * * * 2907 0 0 H 21 * * * * * * 1875 * * * * 2670 * * * * * * * 810 21 0 * * * * * 0 2568 0 1000 K 22 * * * 2789 * 3081 * * 1037 * * * * 2631 3498 * * * * * 22 0 * * * * * 0 2725 0 1000 I 23 3054 * * * * * * 2628 * * 3964 * * 2113 2259 * * * 2227 * 23 0 * * * * * 0 3057 0 1000 P 24 3468 * 3217 3487 * 3283 * * * * * * 1316 * * * 3069 3484 * * 24 0 * * * * 0 * 3421 0 1000 S 25 4065 * * * * 1689 4737 * 3138 * * * 4150 * * 1795 2893 * * * 25 0 * * * * * * 4081 0 0 R 26 * * * 4415 4093 * 4126 * 4336 * * * * * 405 4936 * * * * 26 0 * * * * * * 4212 0 0 C 27 * 77 * * * * 4265 * * * * * * * * * * * * * 27 0 * * * * * * 4452 0 0 H 28 2751 * * * 2255 3024 2708 * 4558 * * * * 3698 4853 4496 4921 * * 2893 28 0 * * * * * * 4452 0 0 A 29 3023 * 2090 * 3693 * 5324 3698 4454 * * * 1736 * 4600 5109 4422 * * * 29 0 * * * * * * 4452 0 0 F 30 * * * * 374 * * * * 4921 3137 * * * * * * 4842 * 4422 30 0 * * * * * * 4452 0 0 E 31 * * * 905 * * * * * * * 4853 * * * * * * 1213 * 31 0 * * * * * * 4452 0 0 K 32 * * * 4496 * * * * 2190 3285 2491 * * 1907 3160 3693 * * * * 32 0 * * * * * * 4452 0 0 E 33 * * 2385 1260 * * * * 3560 * * 4921 * 2678 3096 * * * * * 33 0 * * * * * * 4452 0 0 W 34 4829 * * * 1477 * * * * 2452 3779 * * * * * * 3029 2762 3646 34 0 * * * * * * 4568 0 0 I 35 4575 * * 4649 3185 4927 * 3187 * 2590 3032 * * 3954 3627 2878 4846 5176 * 4906 35 0 * * * * * * 4568 0 0 E 36 4856 * 2693 1751 * 3789 4734 * 2708 4863 * 4720 * 4649 2850 * * * * * 36 0 * * * * * * 4568 0 0 C 37 * 0 * * * * * * * * * * * * * * * * * * 37 182 * 3080 * * * * 4568 0 0 A 38 2291 * * * 4573 * * 4254 4653 3067 2925 * * * * 3733 * 2605 * 2549 38 129 3550 * 1211 816 * 0 4314 1225 1693 H 39 4528 * 5311 1425 * 5109 2949 * 4381 * * 3269 * 4384 * 2687 4448 * * * 39 39 * 5237 * * * 0 4314 0 1693 G 40 1306 * 4377 3809 * 2390 * * * * * * * 4333 3130 4984 3475 * * * 40 268 * 2561 * * 416 1997 4440 0 1791 I 41 4207 * 5193 * 4575 4055 * 2359 * * * 4566 * * * * * 3512 * 1025 41 0 * * * * * 0 4366 0 1899 G 42 3104 * 4055 * * 424 * * * * * * * * * * 4566 4789 * * 42 0 * * * * 2447 292 4366 0 1899 S 43 3166 * * * 4558 3170 4973 4428 5031 2292 * 3768 * 2741 4303 3585 * * * 3944 43 0 * * * * 0 * 4248 0 2033 I 44 2513 4520 4829 3960 4575 * 4863 3303 3817 * * 4927 4720 3789 4497 4303 2357 * * * 44 32 * 5506 * * * * 4568 0 0 R 45 5249 * 2898 2911 * * * * 2673 4710 4881 3771 * * 1856 3731 * * 4243 * 45 54 4773 * 1585 585 0 * 4576 1000 1000 A 46 3085 * 4858 5709 * 1093 * * 5333 * * 4552 * 3946 * 3399 3424 * * 4660 46 0 * * * * * * 4567 0 0 E 47 * * 3237 3404 * * * 4091 2302 * 4732 6430 2400 3860 3253 3615 * * 4511 * 47 0 * * * * * * 4567 0 0 K 48 3998 * * 3021 * 4660 * 4552 1120 * * * * * 3242 3147 4222 * * * 48 0 * * * * * * 4567 0 0 E 49 5048 * 3349 1492 * * 4704 * 1933 5030 5319 * * 4226 * * * 4742 * 3847 49 0 * * * * * * 4760 0 0 C 50 * 0 * * * * * * * * * * * * * * * * * * 50 0 * * * * * * 4760 0 0 K 51 3001 * 3847 3196 5048 4085 * 5549 2411 6099 * * * 3671 3190 5203 3876 3323 * * 51 0 * * * * * * 4760 0 0 I 52 3163 * 3360 * * * 4603 2674 3856 2162 * 5567 2120 * * 5997 4885 * * * 52 0 * * * * * * 4760 0 0 E 53 3382 * * 1950 3975 * * 4352 * 2222 * 6099 3911 3676 5997 * * 4757 * 3233 53 0 * * * * * * 4760 0 0 F 54 * * * * 4040 * 4956 2756 4421 2639 * * * * 2158 4665 * 4686 3858 2471 54 0 * * * * * * 4760 0 0 E 55 * * 2156 1210 4097 * * * * 3985 * * * * 3175 3701 4873 * * * 55 0 * * * * * * 4360 0 0 D 56 * * 79 * * * * * * * * * * * * * * * * 4235 56 0 * * * * * * 4360 0 0 F 57 * * * * 1599 * * * * 2776 * * * * * 4097 * * * 1103 57 0 * * * * * * 4360 0 0 R 58 * * 4454 * 4460 * * 3558 4659 1883 3204 4565 * 3184 3764 * * 4203 * 3005 58 0 * * * * * * 4360 0 0 E 59 * * * 0 * * * * * * * * * * * * * * * * 59 0 * * * * * * 4360 0 0 C 60 * 0 * * * * * * * * * * * * * * * * * * 60 0 * * * * * * 4360 0 0 L 61 4873 4659 * * * * * 2722 * 850 4295 * * 3898 * * 4097 4519 * * 61 0 * * * * * * 4360 0 0 L 62 * * * * * 4567 816 * * 2465 * 4844 * * * * 2966 * * 4449 62 0 * * * * * * 4534 0 0 R 63 * * * * * 4944 922 * 3557 * 4535 4047 * * 2433 * * * 3925 * 63 0 * * * * * * 4536 0 0 Q 64 * * 2891 3489 * 4775 * * 3995 * * 5276 4454 2689 2503 4167 2408 * * 5062 64 0 * * * * * * 4536 0 0 K 65 * * * * 4232 * * * 150 * * * * 4454 * * * * * * 65 0 * * * * * * 4536 0 0 T 66 3936 * * 1126 * * * * * 4115 3962 * * 2109 4312 * 3784 * * * 66 0 * * * * * * 4604 0 0 M 67 3849 * * * 4510 * 5257 3529 2043 2369 2768 * * * 4567 * * 4083 * 3479 67 0 * * * * * * 4604 0 0 K 68 2753 * * 5461 * * 4312 * 2115 4684 4539 * * 3237 2597 4017 2914 * * * 68 0 * * * * * * 4604 0 0 R 69 * 3984 * * * * * * * * * * * * 94 * * * * * 69 0 * * * * * * 4571 0 0 L 70 1802 * * 4939 4561 * * 5003 * 3279 3944 * * 4336 3171 4984 3703 2896 * 4803 70 0 * * * * * * 4571 0 0 H 71 * * 4291 2781 * 5363 3940 * 3216 3955 3640 2356 * 3675 5159 3336 * 4818 * 5284 71 0 * * * * * * 4571 0 0 A 72 1716 * * 3092 * * * 3376 3908 4818 3881 * * 5069 3734 4984 3515 4173 4945 * 72 0 * * * * * * 4571 0 0 I 73 * * * * * * * 751 * 4950 2146 * * * * * * 2760 * * 73 0 * * * * * * 4571 0 0 R 74 4953 * * 2509 * * * 4663 3371 * 4984 5292 * 2265 2022 4336 * * * 3395 74 0 * * * * * * 4571 0 0 R 75 2668 * 4703 3211 * 4222 * * 1475 4720 * 3190 * * 3889 4974 4785 * * * 75 0 * * * * * * 4406 0 0 Q 76 3521 * * 1087 * * 4718 * * * * * * 1737 * * * 3262 * * 76 54 * 4771 * * * * 4506 0 0 R 77 * * * 4141 3169 * * * 3127 * * * * * 1062 * * * 3203 2944 77 0 * * * * 0 * 4557 0 1000 E 78 4683 * 3206 2937 * * * 4259 2752 4681 4139 3721 * 2769 2725 * * * * 4265 78 0 * * * * * * 4429 0 0 K 79 * * * * * * * * 751 * * * * * 1553 * * 3938 * * 79 0 * * * * * * 4417 0 0 L 80 2957 * * * * * * * 2746 1653 * * * 1799 4113 * * 4084 * * 80 0 * * * * * * 4467 0 0 I 81 4154 * * 2485 4139 * * 1850 2511 * * 4113 * * * * * 3837 * 2966 81 121 3638 * 2000 415 * * 4467 1000 0 K 82 * * 3693 3865 * * * * 861 3946 3476 3844 * * 3660 * * * * * 82 0 * * * * * * 4134 0 0 E 83 2765 * * 352 * * * * * * * * 3854 * * * * * * * 83 0 * * * * * * 4134 0 0 G 84 * * * 3588 * 306 * * * * * * 3211 * * * * * * * 84 0 * * * * * * 3872 0 0 K 85 * * * 2628 * * * * 1219 4243 3211 * * * 3332 * * 3934 * 3588 85 0 * * * * * * 3872 0 0 Y 86 3211 * * 2878 * * * 3517 3332 3703 * * * * 2628 * * * 3503 2043 86 0 * * * * * * 3872 0 0 T 87 4243 * 2607 * * * * * 2093 * * * 3503 * * * 1119 * * * 87 0 * * * * * * 3872 0 0 P 88 2372 * * * * * * * 3190 2969 * * 1079 * * 3376 * * * * 88 0 * * * * * * 3580 0 0 P 89 * * * * * * * * * * * * 0 * * * * * * * 89 0 * * 0 * * * 3039 0 0 //