HHsearch 1.5 NAME c5lahA_ FAM FILE c5lahA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5lahA_.a3m DATE Sat May 13 08:15:56 2017 LENG 45 match states, 45 columns in multiple alignment FILT 1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.4951 2.9201 SEQ >ss_dssp CCTTCTTCEECCTTCEEESSCCCTTCEECGGGEECSSTTCEEEEC >sa_dssp DEEEEEECCEBEEDCCDCDEECDEECEDBBEDCCBEDEEDEAABD >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCC >ss_conf 987889876278987445331122200016553013668801039 >Consensus cypgqpgcghcsrpnycegarcesgfhdcgsdhwcdasgdrccca >c5lahA_ CYPGQPGCGHCSRPNYCEGARCESGFHDCGSDHWCDASGDRCCCA # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * C 1 * 0 * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 Y 2 * * * * * * * * * * * * * * * * * * * 0 2 0 * * * * * * 1000 0 0 P 3 * * * * * * * * * * * * 0 * * * * * * * 3 0 * * * * * * 1000 0 0 G 4 * * * * * 0 * * * * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 Q 5 * * * * * * * * * * * * * 0 * * * * * * 5 0 * * * * * * 1000 0 0 P 6 * * * * * * * * * * * * 0 * * * * * * * 6 0 * * * * * * 1000 0 0 G 7 * * * * * 0 * * * * * * * * * * * * * * 7 0 * * * * * * 1000 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 1000 0 0 G 9 * * * * * 0 * * * * * * * * * * * * * * 9 0 * * * * * * 1000 0 0 H 10 * * * * * * 0 * * * * * * * * * * * * * 10 0 * * * * * * 1000 0 0 C 11 * 0 * * * * * * * * * * * * * * * * * * 11 0 * * * * * * 1000 0 0 S 12 * * * * * * * * * * * * * * * 0 * * * * 12 0 * * * * * * 1000 0 0 R 13 * * * * * * * * * * * * * * 0 * * * * * 13 0 * * * * * * 1000 0 0 P 14 * * * * * * * * * * * * 0 * * * * * * * 14 0 * * * * * * 1000 0 0 N 15 * * * * * * * * * * * 0 * * * * * * * * 15 0 * * * * * * 1000 0 0 Y 16 * * * * * * * * * * * * * * * * * * * 0 16 0 * * * * * * 1000 0 0 C 17 * 0 * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1000 0 0 E 18 * * * 0 * * * * * * * * * * * * * * * * 18 0 * * * * * * 1000 0 0 G 19 * * * * * 0 * * * * * * * * * * * * * * 19 0 * * * * * * 1000 0 0 A 20 0 * * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1000 0 0 R 21 * * * * * * * * * * * * * * 0 * * * * * 21 0 * * * * * * 1000 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1000 0 0 E 23 * * * 0 * * * * * * * * * * * * * * * * 23 0 * * * * * * 1000 0 0 S 24 * * * * * * * * * * * * * * * 0 * * * * 24 0 * * * * * * 1000 0 0 G 25 * * * * * 0 * * * * * * * * * * * * * * 25 0 * * * * * * 1000 0 0 F 26 * * * * 0 * * * * * * * * * * * * * * * 26 0 * * * * * * 1000 0 0 H 27 * * * * * * 0 * * * * * * * * * * * * * 27 0 * * * * * * 1000 0 0 D 28 * * 0 * * * * * * * * * * * * * * * * * 28 0 * * * * * * 1000 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 1000 0 0 G 30 * * * * * 0 * * * * * * * * * * * * * * 30 0 * * * * * * 1000 0 0 S 31 * * * * * * * * * * * * * * * 0 * * * * 31 0 * * * * * * 1000 0 0 D 32 * * 0 * * * * * * * * * * * * * * * * * 32 0 * * * * * * 1000 0 0 H 33 * * * * * * 0 * * * * * * * * * * * * * 33 0 * * * * * * 1000 0 0 W 34 * * * * * * * * * * * * * * * * * * 0 * 34 0 * * * * * * 1000 0 0 C 35 * 0 * * * * * * * * * * * * * * * * * * 35 0 * * * * * * 1000 0 0 D 36 * * 0 * * * * * * * * * * * * * * * * * 36 0 * * * * * * 1000 0 0 A 37 0 * * * * * * * * * * * * * * * * * * * 37 0 * * * * * * 1000 0 0 S 38 * * * * * * * * * * * * * * * 0 * * * * 38 0 * * * * * * 1000 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 1000 0 0 D 40 * * 0 * * * * * * * * * * * * * * * * * 40 0 * * * * * * 1000 0 0 R 41 * * * * * * * * * * * * * * 0 * * * * * 41 0 * * * * * * 1000 0 0 C 42 * 0 * * * * * * * * * * * * * * * * * * 42 0 * * * * * * 1000 0 0 C 43 * 0 * * * * * * * * * * * * * * * * * * 43 0 * * * * * * 1000 0 0 C 44 * 0 * * * * * * * * * * * * * * * * * * 44 0 * * * * * * 1000 0 0 A 45 0 * * * * * * * * * * * * * * * * * * * 45 0 * * 0 * * * 1000 0 0 //