HHsearch 1.5 NAME c5jvmA_ FAM FILE c5jvmA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5jvmA_.a3m DATE Thu Feb 9 14:03:54 2017 LENG 82 match states, 82 columns in multiple alignment FILT 70 out of 74 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4314 0.0257 SEQ >ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHTCCSCSCCCCC >sa_dssp EEECDEEDCDEDDEEDDDEEEEDDEEEEDEDDDDEDEDEDEDECEDDEDCDEBEEDEEEEDEECDDDCEDCEEEEEEEEEEE >ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC >ss_conf 9875722313799999999999999999999999999799999999999999845556762599999999953122758898 >Consensus xxnxxxxxtxlxexxxxIxxLxxxlxexxxxvxxlekERdFYFxKLRdIEilcQxxexxxxxxxxxIxxILYaTeEgfxxpd >c5jvmA_ LSNEDPKDTLLREFQEEIARLKAQLEKKGMLVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIPD >UniRef50_Q8WQ86(303-363:506) Microtubule-associated protein RP/EB family member 1 n=1 Tax=Dictyostelium discoideum RepID=EB1_DICDI E=3e-09 s/c=1.03 id=34% cov=74% ----------LEEQKSVIQEMTEKIANFEITIQDIEKDRDFYFERLREAEIFCQDH--SDVPLLGEVLKILY---------- >UniRef50_C1EER9(183-246:410) Microtubule end binding protein n=2 Tax=Micromonas RepID=C1EER9_9CHLO E=1e-13 s/c=1.21 id=32% cov=79% -----------SSSNAKVATLQKEIESLKLAVERAEQEREFYFEKLQDVEFLCQRPEFVGQHLTCVVERILYHTE------- >UniRef50_A7AM82(308-377:380) Microtubule-associated protein RP/EB family member protein n=1 Tax=Babesia bovis RepID=A7AM82_BABBO E=1e-12 s/c=1.07 id=35% cov=87% ----DKLENDLKTQKAQIEQLKIQLGQAQAEKQVAKMSKDFYYNKLRKIEIMCQKNENGHCD-VNKLFDIMYATD------- >UniRef50_Q9XXA2(208-278:299) Protein VW02B12L.3, confirmed by transcript evidence n=5 Tax=root RepID=Q9XXA2_CAEEL E=0.0003 s/c=0.65 id=27% cov=85% -------------LKQEIEKHKAASDEWETTAKEMETEREYYYSILQRVESLANEAEesGSSTVDVAALKTILYAGNEDTEQVD >UniRef50_A5DB68(179-256:260) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DB68_PICGU E=8e-16 s/c=1.08 id=34% cov=89% ----------LANKSHELEATLEELKDYKISVTSLQAERNFYFNKLREIEVLCETAKNSDTqtptsELIAEIQAILYKTEEGFEAED >UniRef50_A2GKK4(172-252:254) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2GKK4_TRIVA E=1e-10 s/c=0.84 id=32% cov=96% -SNQSAQQSLsESDSEKKVRKLEKSVTRLENELMATTKERQFYWEKLRDIEIYCNENQNEST---KQILELLYRLDADgeFIQPD >UniRef50_Q7PNM5(201-264:265) AGAP005829-PA n=3 Tax=Culicidae RepID=Q7PNM5_ANOGA E=3e-10 s/c=1.03 id=29% cov=77% ------------KTNDRISALSAEINELAMQMQNVEMSREYYFNKLVLIEnYINEQPEDSQDGLCAKVKEIMYAS-------- >UniRef50_A5KB89(364-428:560) Microtubule associated protein EB1, putative n=2 Tax=Plasmodium RepID=A5KB89_PLAVI E=4e-12 s/c=1.11 id=28% cov=79% ----------LEKKNSEIVSLQDKLKAQEKEKKLLLFQKNFYYNKLRFLELLC-NQTDDDSLLVSDIQHIIYARE------- >UniRef50_Q8IQA0(225-293:294) CG32371 n=2 Tax=Drosophila melanogaster RepID=Q8IQA0_DROME E=2e-08 s/c=0.87 id=33% cov=84% -SAQTEKATTEPDSEGSIEELRNYCK----YVSRMKQERNFYLSKLRAIDHICQKyNSGRDRVILEKITKIIYS--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1000 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 2028 0 0 N 3 2294 * * * * * * * * * * 329 * * * * * * * * 3 0 * * * * * * 2702 0 0 E 4 * * * 2414 * * * * * * * * * 705 2328 * * * * * 4 0 * * * * * * 2702 0 0 D 5 * * 841 * * * * * * * * * * * * 2650 1824 * * * 5 0 * * * * * * 3224 0 0 P 6 2849 * * 2908 * * * * 3076 * * * 715 * * * * * * * 6 0 * * * * * * 3399 0 0 K 7 3015 * * * * * * * 2041 2031 * 3065 * 2849 * * * 2939 * * 7 0 * * * * * * 3399 0 0 D 8 3071 * 3403 2193 * 3152 * * 3204 * * * 3057 2142 * * * * * * 8 0 * * * * * * 3495 0 0 T 9 * * * * * * * * 3490 * * 2756 * * 3424 3331 810 * * * 9 141 * 3424 * * * * 3805 0 0 L 10 * * 3733 2761 * * * 2788 * 1362 * * 3584 3821 * * 3488 * * * 10 277 2517 * 1596 580 * 0 3754 1619 1000 L 11 * * * 2798 * * * 3626 * 551 * * * 4177 * * * 4741 * * 11 0 * * * * 0 * 4397 0 1000 R 12 4667 * * 2570 * * * 4635 2424 * * 5006 3780 4778 2456 2266 4830 * * * 12 0 * * * * * * 4630 0 0 E 13 3596 * 2979 1373 * * * * 2885 * * 3553 * 3141 * 4639 5050 * * * 13 44 5046 * 1000 1000 * * 4707 1000 0 F 14 3420 * * 5680 5640 * * * 2867 1963 * * * 3507 * 2330 3433 5492 5201 4486 14 0 * * * * * * 4816 0 0 Q 15 * * * 2453 5708 * * * 1717 5785 * 2481 * 2582 4099 5449 5685 5099 * * 15 0 * * * * * * 4844 0 0 E 16 2491 * 3418 2120 * 4927 5755 * 4323 4175 * 5884 * 2070 * 3844 5866 * * * 16 0 * * * * * * 4707 0 0 E 17 6349 * 5677 1484 * 6291 * * 3968 5718 4664 6061 5276 2060 4113 5036 3666 5160 * * 17 0 * * * * * * 4801 0 0 I 18 4333 * * * 5932 * * 858 * 3362 4726 4542 * * * * 4584 2622 * * 18 0 * * * * * * 4750 0 0 A 19 2592 * 3433 2073 * 5662 * 4305 4449 5124 * 5545 6268 3041 4485 3766 5182 4119 * * 19 0 * * * * * * 4755 0 0 R 20 3041 * 6204 1814 * * * 5350 3089 4710 * 3434 * 3391 3911 3164 4865 * * * 20 17 * 6410 * * * * 4769 0 0 L 21 * * * * * * 4876 4930 * 381 3650 5947 5426 * * * 5147 5810 * * 21 0 * * * * * 0 4736 0 1000 K 22 * * * 3327 4705 * * * 2128 4445 4875 3651 * 3087 3597 3390 2490 * * * 22 16 * 6532 * * * 0 4755 0 1000 A 23 2382 * 4927 2153 * * 5957 5020 2657 3727 * 3505 6710 5407 5234 4023 4053 * * * 23 0 * * * * 921 1084 4759 0 1448 Q 24 4880 * 6122 1622 * * 5666 * 2692 6092 * 4719 * 1984 5629 3933 4886 * * 5192 24 72 * 4368 * * * 0 4760 0 1000 L 25 4212 4489 * * 5444 * * 2664 * 1326 5147 4399 * 5256 * 4424 4911 2833 * * 25 0 * * * * * 0 4620 0 1951 E 26 3735 * 3499 2753 * 4524 5110 * 2527 5064 4555 3502 * 4992 5621 3771 3218 4851 * 6126 26 48 * 4943 * * * 0 4663 0 1951 K 27 4590 * 3977 872 * 5815 * * 4082 * 5609 5312 * 3334 4342 4998 4829 6498 * * 27 0 * * * * * 0 4594 0 2245 K 28 4194 * * 3701 5312 * * 5372 6482 1400 3113 6242 * 4808 * 4345 * 4595 4922 2825 28 0 * * * * * 0 4594 0 2245 G 29 4045 * 5455 2353 * 5360 * 4744 1910 * * 4522 * 3197 2259 4984 * * * * 29 0 * * * * 2041 402 4594 0 2245 M 30 4185 * * 2580 * 5705 * 2951 5489 2359 3916 3794 * 5037 * 3933 3122 3987 * * 30 0 * * * * 1475 643 4595 0 2006 L 31 3342 * 4440 2369 * * 5663 * 5967 3598 6443 6610 * 3991 5657 3135 2080 4397 * 4599 31 18 6302 * 1585 585 0 * 4662 1000 1633 V 32 3764 4649 * * * * * 2658 3175 3030 3787 5424 * * * 5563 6391 1531 5646 * 32 0 * * * * * * 4730 0 0 E 33 4361 * 2567 1566 6178 * * 6010 3521 6234 4339 * * 2998 4102 4476 4748 * * * 33 0 * * * * * * 4730 0 0 D 34 3643 * 3638 4995 * 1927 6036 2786 * 4964 * 4327 * 4253 4000 2914 4817 5639 * * 34 0 * * * * * * 4730 0 0 L 35 3538 * * * 5323 * * 3709 * 827 3342 * * * * 5510 5355 3713 * 5182 35 0 * * * * * * 4730 0 0 E 36 * * 4853 641 * * 5722 * 3788 4039 * 4861 * 5061 4173 * 4257 * * * 36 0 * * * * * * 4734 0 0 K 37 5093 * * 5130 4173 * * 5849 1133 4657 4326 4739 * 3754 3566 5125 3335 * * * 37 0 * * * * * * 4734 0 0 E 38 * * 3966 344 * * * * * * * * * 3709 * 3806 * * * * 38 0 * * * * * * 4734 0 0 R 39 * * * * * * * * 2859 * * * * * 214 * * * * * 39 0 * * * * * * 4734 0 0 D 40 * * 832 3138 * * 4739 * * * 4853 2302 * 5357 * * * 5296 * * 40 0 * * * * * * 4734 0 0 F 41 * * * * 91 * * * * * * * * * * * * * * 4026 41 0 * * * * * * 4734 0 0 Y 42 * * * * * * * * * * * * * * * * * * 5296 37 42 0 * * * * * * 4734 0 0 F 43 * * * * 461 * 4739 * * 5201 * * * * * * * * 5357 2440 43 0 * * * * * * 4734 0 0 G 44 5086 * 3921 3435 * 2664 * * * * * 1481 * 4746 4632 2195 * * * * 44 0 * * * * * * 4734 0 0 K 45 * * * * * * * 4998 81 * * * * * 5405 * * * * * 45 0 * * * * * * 4734 0 0 L 46 * * * * * * * * * 55 * * * * * * * 4739 * * 46 0 * * * * * * 4734 0 0 R 47 * * * * 5327 * * * * * * * * 3448 229 * * 5054 * * 47 0 * * * * * * 4734 0 0 N 48 3654 * 1307 2859 4173 * * * 3837 5054 * 4448 * 4588 3696 6326 4443 * * * 48 0 * * * * * * 4734 0 0 I 49 5405 * * * * * * 443 * 3768 * * * * * * * 2581 * * 49 0 * * * * * * 4734 0 0 E 50 * * 5201 96 * * * * 4739 * * * * * * * * * * * 50 44 5054 * 0 * * * 4734 1000 0 L 51 * * 5986 6368 5821 * 5201 1226 5327 2213 * * * * * 4426 6291 2714 * 4403 51 22 6071 * 2807 222 * * 4734 1000 0 I 52 * * * * 3960 * * 2451 * 881 3566 * * * * * * 4135 * 3866 52 0 * * * * * * 4734 0 0 C 53 3906 686 * * 4632 * * 5252 * 4434 6244 5054 * * * * 4768 3328 * 5683 53 125 6687 3768 2585 263 * * 4734 1000 0 Q 54 * * * 3614 * * 5792 * 5981 5257 * 4072 * 324 * * * * * * 54 101 3893 * 2492 282 0 * 4570 2408 1940 E 55 4564 * 3720 1377 * 5798 4496 * 3866 * * 3083 * 4197 4323 4959 3576 5183 * * 55 150 3341 * 1124 886 * * 4734 2454 0 N 56 2788 * 3549 5899 * 4634 3549 4430 * 5066 * 2103 2781 3743 4462 4820 5844 * * * 56 81 5036 5385 2436 295 * * 4691 1565 0 E 57 6264 5642 3519 1160 * 6489 * * 6358 4863 6494 5653 6637 2774 6278 3784 3526 6042 * * 57 104 4156 6209 792 1243 * 0 4671 1839 1000 G 58 4582 * 2665 4198 4774 1876 * * 4223 5172 * 3027 * 5574 6546 3182 4057 5975 * 6037 58 59 4640 * 2821 220 1000 1000 4718 1757 1511 E 59 5209 6000 2752 2091 * 5624 * 4097 3725 3707 * 6716 * 4115 5189 2428 6120 4371 * * 59 58 5083 6661 2996 193 0 * 4738 1559 1000 N 60 6673 * 1967 3622 * 3650 3917 5021 5139 5447 4582 3486 5792 3931 6741 2382 * 6736 * * 60 159 4206 4315 2023 407 0 * 4697 2064 1000 D 61 5768 5568 2778 4288 * 5440 5727 4775 4660 3869 * 2866 5035 4325 4614 4139 2766 3390 * 5676 61 109 4426 5242 2766 229 1971 425 4682 1737 1942 P 62 6619 * 3688 3337 * 3604 5644 3081 * 4328 * 4997 1885 5610 * 4393 4183 3084 * * 62 201 3604 4387 3460 137 472 1841 4646 2276 2140 V 63 5922 * 4443 5437 2569 * * 3203 * 1353 4175 * 3923 * * 4214 4964 4695 * * 63 69 5557 5313 1000 1000 1472 645 4621 1000 2070 L 64 4173 4944 * * 6761 * * 2768 5722 2004 4734 * * * 3846 4477 3555 1996 * * 64 0 * * * * 565 1625 4624 0 2044 Q 65 3416 5756 4976 2805 * 4554 5679 * 2118 * * 3011 * 2901 4384 3599 5631 6388 * * 65 13 6838 * 1585 585 0 * 4674 1000 1000 R 66 3907 * 2614 3372 * * 6324 * 1869 5518 * * * 2806 2901 5558 4982 4819 * * 66 0 * * * * * * 4740 0 0 I 67 6301 * * * * * * 782 * 3566 5691 * * * * * * 1728 * * 67 0 * * * * * * 4740 0 0 V 68 * * * 3619 2972 * 5911 6975 3596 2125 4124 * * 1892 * 4840 3790 5602 * * 68 0 * * * * * * 4740 0 0 D 69 2812 * 2644 2305 * 4215 5634 * 2651 * * 4995 * 3996 3781 5049 3942 * * * 69 0 * * * * * * 4740 0 0 I 70 * * * * * * * 300 * 4094 * * * * * * * 2953 * * 70 0 * * * * * * 4740 0 0 L 71 * * * * * * * 3587 * 318 3406 * * * * * * 5641 * * 71 0 * * * * * * 4740 0 0 Y 72 * * * * * * * * * * * * * * * * * * * 0 72 0 * * * * * * 4718 0 0 A 73 966 * 4661 2797 * * 3951 * 4870 * * * * 6430 5134 2594 * * * * 73 27 5735 * 1000 1000 * * 4611 1000 0 T 74 4441 * * * * 4498 * * * 4521 * * * * 3873 3478 498 * * * 74 0 * * * * * * 4480 0 0 D 75 4562 * 1946 922 * * * * * * * 3402 * 4418 * * 5102 * * * 75 0 * * * * * * 4378 0 0 E 76 4681 * 2441 419 * * * * 5100 * * * * * * * * * * * 76 125 3589 * 1000 1000 * * 4077 1514 0 G 77 * * 2755 * * 390 * * * * * 4007 * 5224 * * * * * * 77 70 4403 * 1000 1000 * * 3795 1000 0 F 78 * * * * 247 * * * * * * * * * * * 3216 * * 4330 78 0 * * * * * * 3776 0 0 V 79 2103 * * 1354 * * * 4312 5534 4996 * 5495 * 4042 * * 5321 2600 * * 79 0 * * * * * * 3813 0 0 I 80 1757 * * * * * * 3498 * 3672 4668 * 2629 2413 * 4203 * 3410 * * 80 0 * * * * * * 3746 0 0 P 81 * * * 4867 * * * * * * * 4603 379 * * * * 2682 * * 81 0 * * * * * * 3737 0 0 D 82 * * 650 1841 * * * * * * * 4641 * 4528 * * * * * * 82 0 * * 0 * * * 3633 0 0 //