HHsearch 1.5 NAME c5j43F_ FAM FILE c5j43F_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5j43F_.a3m DATE Sat Jul 30 14:16:53 2016 LENG 101 match states, 101 columns in multiple alignment FILT 5 out of 9 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.8 EVD 0.4003 -0.2191 SEQ >ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHTTCSCSCCSSCCCCHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTTTT C >sa_dssp EEEDEBDEECDCABEDADECCEDCBDEDBCDCBCECDDEEDDEDDEEECDDBDDDBDDBBECADDCBECADECDCEDADDACCCACEBBDDACEDCEEDE E >ss_pred CCHHHHCHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC C >ss_conf 9678815898876999999999872245202002002788386223846899999999998743211331188881468885458899999999975208 9 >Consensus xxvexLxxxQxxxikxiDNxixnxLxdxDxxgTlrDmxGnpvPKxxGGYWnhlQEMqnsxxGLrxxxxsLkNxNxpxxQxayxxatxxlxkIExxxkxxG x >c5j43F_ KTVDKLNQKQESAIKKIDNTIKNALKDHDIIGTLKDMDGKPVPKENGGYWDAMQEMQNTLRGLRNHADTLKNVNNPEAQAAYGRATDAINKIESALKGYG I >UniRef50_A4W4W8(261-361:361) Putative hemagglutinin-related protein n=1 Tax=Enterobacter sp. 638 RepID=A4W4W8_ENT38 E=2e-41 s/c=1.67 id=89% cov=101% KPVEKLNQKQESAIKKIDNAIKNALKDHDVMGTLKDMDGTPVPKKNGGYWDHMQEMQNTLRGLRNHADTLKNINNPEAQAAYGRATDAINKIESALKGHG I >UniRef50_UPI00017896E1(238-344:347) protein of unknown function DUF909 n=2 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017896E1 E=1e-35 s/c=1.40 id=37% cov=98% --VEELSRAQNRNLETLDNIVDKHLTEMDFSGTLRDLQGNPVPKRDGGYWNHLQEMQDSYKGLskikRGLEGSLQNPNLSDStrktlQDALNKANLNLRK IEDLFEPFG- >UniRef50_Q97J44(1-73:76) Putative uncharacterized protein n=1 Tax=Clostridium acetobutylicum RepID=Q97J44_CLOAB E=1e-10 s/c=0.92 id=42% cov=64% ------------------------------------MQGNLAPKQSGGYWNHLQEMKNSYVGLKraqsTLEGSLKNPNLPSHtkefiQSKYETTTKYLQR IEELFKAYG- >UniRef50_A0AEW1(105-145:153) Complete genome n=3 Tax=Listeria RepID=A0AEW1_LISW6 E=7e-06 s/c=1.26 id=45% cov=42% -----LTPAQKKSIKRIDNNIQNHLTDGDFSVTKRDLEGNPVPKKD------------------------------------------------------ - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 0 * * * * * * * * * * * 1 0 * * * * * * 1071 0 0 T 2 * * * * * * * * * * * * 1000 * * * 1000 * * * 2 0 * * * * * * 1071 0 0 V 3 * * * * * * * * * * * * * * * * * 0 * * 3 0 * * * * * * 1569 0 0 D 4 * * 1773 499 * * * * * * * * * * * * * * * * 4 0 * * * * * * 1569 0 0 K 5 * * * 1251 * * * * 786 * * * * * * * * * * * 5 0 * * * * * * 1569 0 0 L 6 * * * * * * * * * 0 * * * * * * * * * * 6 0 * * * * * * 1794 0 0 N 7 * * * * * * * * * * * 1174 * * * 1753 1943 * * * 7 0 * * * * * * 1794 0 0 Q 8 * * * * * * * * * * * * 1943 1174 1753 * * * * * 8 0 * * * * * * 1794 0 0 K 9 844 * * * * * * * 1174 * * * * * * * * * * * 9 0 * * * * * * 1794 0 0 Q 10 * * * * * * * * * * * * * 0 * * * * * * 10 0 * * * * * * 1794 0 0 E 11 * * * 1174 * * * * 1943 * * 1753 * * * * * * * * 11 0 * * * * * * 1794 0 0 S 12 * * * * * * * * 1943 * * * * * 1753 1174 * * * * 12 0 * * * * * * 1794 0 0 A 13 1174 * * * * * * * * * * 1753 * * * 1943 * * * * 13 0 * * * * * * 1794 0 0 I 14 * * * * * * * 508 * 1753 * * * * * * * * * * 14 0 * * * * * * 1794 0 0 K 15 * * * 1753 * * * * 508 * * * * * * * * * * * 15 0 * * * * * * 1794 0 0 K 16 * * * * * * * * 1174 * * * * * 1943 * 1753 * * * 16 0 * * * * * * 1794 0 0 I 17 * * * * * * * 508 * 1753 * * * * * * * * * * 17 0 * * * * * * 1794 0 0 D 18 * * 0 * * * * * * * * * * * * * * * * * 18 0 * * * * * * 1794 0 0 N 19 * * * * * * * * * * * 0 * * * * * * * * 19 0 * * * * * * 1794 0 0 T 20 2188 * * * * * * 1753 * * * 1943 * * * * 2161 * * * 20 0 * * * * * * 1794 0 0 I 21 * * * * * * * 508 * * * * * * * * * 1753 * * 21 0 * * * * * * 1794 0 0 K 22 * * 1753 * * * * * 1174 * * * * 1943 * * * * * * 22 0 * * * * * * 1794 0 0 N 23 * * * * * * * * 1753 * * 508 * * * * * * * * 23 0 * * * * * * 1794 0 0 A 24 1174 * * * * * 844 * * * * * * * * * * * * * 24 0 * * * * * * 1794 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 1794 0 0 K 26 * * * * * * * * 1174 * * * * * * * 844 * * * 26 0 * * * * * * 1794 0 0 D 27 * * 508 1753 * * * * * * * * * * * * * * * * 27 0 * * * * * * 1794 0 0 H 28 * * * * * 1943 1174 * * * 1753 * * * * * * * * * 28 0 * * * * * * 1794 0 0 D 29 * * 0 * * * * * * * * * * * * * * * * * 29 0 * * * * * * 1794 0 0 I 30 * * * * 844 * * 2161 * * * * * * * * * 2188 * * 30 0 * * * * * * 1794 0 0 I 31 * * * * * * * 2161 * * 2188 * * * * 844 * * * * 31 0 * * * * * * 1794 0 0 G 32 * * * * * 435 * * * * * * * * * * * 1943 * * 32 0 * * * * * * 1794 0 0 T 33 * * * * * * * * * * * * * * * * 0 * * * 33 0 * * * * * * 1794 0 0 L 34 * * * * * * * * 1943 435 * * * * * * * * * * 34 0 * * * * * * 1794 0 0 K 35 * * * * * * * * 1174 * * * * * 844 * * * * * 35 0 * * * * * * 1794 0 0 D 36 * * 0 * * * * * * * * * * * * * * * * * 36 0 * * * * * * 1794 0 0 M 37 * * * * * * * * * 1462 651 * * * * * * * * * 37 0 * * * * * * 1859 0 0 D 38 * * 1418 2445 * * * * * * * * * 1177 * * * * * * 38 0 * * * * * * 1859 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 1859 0 0 K 40 * * * * * * * * 2371 * * 676 * * * * 2467 * * * 40 0 * * * * * * 1859 0 0 P 41 * * * * * * * * * 1928 * * 440 * * * * * * * 41 0 * * * * * * 1859 0 0 V 42 1928 * * * * * * * * * * * * * * * * 440 * * 42 0 * * * * * * 1859 0 0 P 43 * * * * * * * * * * * * 0 * * * * * * * 43 0 * * * * * * 1859 0 0 K 44 * * * * * * * * 0 * * * * * * * * * * * 44 0 * * * * * * 1859 0 0 E 45 * * * 2371 * * * * 1456 * * * * 1928 2478 * * * * * 45 0 * * * * * * 1859 0 0 N 46 * * 1462 * * * * * * * * 1418 * * * 1928 * * * * 46 0 * * * * * * 1859 0 0 G 47 * * * * * 0 * * * * * * * * * * * * * * 47 0 * * * * * * 1758 0 0 G 48 * * * * * 0 * * * * * * * * * * * * * * 48 0 * * * * * * 1758 0 0 Y 49 * * * * * * * * * * * * * * * * * * * 0 49 0 * * * * * * 1758 0 0 W 50 * * * * * * * * * * * * * * * * * * 0 * 50 0 * * * * * * 1758 0 0 D 51 * * 1193 * * * * * * * * 830 * * * * * * * * 51 0 * * * * * * 1758 0 0 A 52 2184 * * * * * 359 * * * * * * * * * * * * * 52 0 * * * * * * 1758 0 0 M 53 * * * * * * * * * 830 1193 * * * * * * * * * 53 0 * * * * * * 1758 0 0 Q 54 * * * * * * * * * * * * * 0 * * * * * * 54 0 * * * * * * 1758 0 0 E 55 * * * 0 * * * * * * * * * * * * * * * * 55 0 * * * * * * 1758 0 0 M 56 * * * * * * * * * * 0 * * * * * * * * * 56 0 * * * * * * 1758 0 0 Q 57 * * * * * * * * 1837 * * * * 474 * * * * * * 57 0 * * * * * * 1758 0 0 N 58 * * 1823 * * * * * * * * 479 * * * * * * * * 58 0 * * * * * * 1758 0 0 T 59 * * * * * * * * * * * * * * * 830 1193 * * * 59 0 * * * * * * 1758 0 0 L 60 * * * * * * * * * 1193 * * * * * * * * * 830 60 0 * * * * * * 1758 0 0 R 61 * * * * * * * * 1823 * * * * * 1193 * * 1837 * * 61 0 * * * * * * 1758 0 0 G 62 * * * * * 0 * * * * * * * * * * * * * * 62 0 * * * * * * 1758 0 0 L 63 * * * * * * * * * 0 * * * * * * * * * * 63 479 1823 * 2000 415 * * 1758 1000 0 R 64 * * * * * * * * 1837 * * * * * 474 * * * * * 64 474 1837 * 2000 415 * * 1758 1000 0 N 65 * * * * * 1823 * * * * * 1193 * * * * 1837 * * * 65 0 * * * * * * 1758 0 0 H 66 * * * * * * 1193 * * 830 * * * * * * * * * * 66 0 * * * * * * 1758 0 0 A 67 1193 * * 830 * * * * * * * * * * * * * * * * 67 0 * * * * * * 1758 0 0 D 68 * * 1193 * * 830 * * * * * * * * * * * * * * 68 0 * * * * * * 1758 0 0 T 69 * * * * * * * * * * * * * * * 830 1193 * * * 69 0 * * * * * * 1758 0 0 L 70 * * * * * * * * * 0 * * * * * * * * * * 70 0 * * * * * * 1758 0 0 K 71 * * * * * * * * 479 * * * * 1823 * * * * * * 71 0 * * * * * * 1758 0 0 N 72 * * * * * * * * * * * 0 * * * * * * * * 72 0 * * * * * * 1758 0 0 V 73 * * * * * * * 2201 * * * * 830 * * * * 2184 * * 73 0 * * * * * * 1758 0 0 N 74 * * * * * * * * * * * 0 * * * * * * * * 74 0 * * * * * * 1758 0 0 N 75 * * * * * * * * * 830 * 1193 * * * * * * * * 75 0 * * * * * * 1758 0 0 P 76 * * * * * * * * * * * * 479 * * 1823 * * * * 76 0 * * * * * * 1758 0 0 E 77 * * 1823 1193 * * * * * * * * * * * 1837 * * * * 77 0 * * * * * * 1758 0 0 A 78 1193 * * * * * 1837 * * * * * * * * 1823 * * * * 78 1193 830 * 2322 322 * * 1758 1369 0 Q 79 * * * * * * * * * * * * * 0 * * * * * * 79 0 * * * * * * 1758 0 0 A 80 1193 * 1823 * * * * * * * * * * * * 1837 * * * * 80 0 * * * * * * 1758 0 0 A 81 474 * * * * * * * 1837 * * * * * * * * * * * 81 0 * * * * * * 1758 0 0 Y 82 * * * * * * * * * 1823 * * * * * * * * * 479 82 0 * * * * * * 1758 0 0 G 83 * * * 1837 * 1193 * * * * * 1823 * * * * * * * * 83 0 * * * * * * 1758 0 0 R 84 * * * * * * * * 1823 * * * * * 1193 * 1837 * * * 84 0 * * * * * * 1758 0 0 A 85 474 * * * * * * * * * * * * * * * 1837 * * * 85 0 * * * * * * 1758 0 0 T 86 * * * * * * * * * * * 1823 * * * * 479 * * * 86 0 * * * * * * 1758 0 0 D 87 * * 1193 * * * * * 1837 1823 * * * * * * * * * * 87 0 * * * * * * 1758 0 0 A 88 1193 * * * * * * * * * * 1823 * * * * * * * 1837 88 0 * * * * * * 1758 0 0 I 89 * * * * * * * 1193 * 830 * * * * * * * * * * 89 0 * * * * * * 1758 0 0 N 90 * * * * * * * * * * * 1193 * 1837 1823 * * * * * 90 0 * * * * * * 1758 0 0 K 91 * * * * * * * * 474 * * * * * 1837 * * * * * 91 0 * * * * * * 1758 0 0 I 92 * * * * * * * 0 * * * * * * * * * * * * 92 0 * * * * * * 1758 0 0 E 93 * * * 0 * * * * * * * * * * * * * * * * 93 0 * * * * * * 1758 0 0 S 94 * * 1823 1837 * * * * * * * * * * * 1193 * * * * 94 0 * * * * * * 1758 0 0 A 95 1193 * * * * * * * * 830 * * * * * * * * * * 95 0 * * * * * * 1758 0 0 L 96 * * * * 830 * * * * 1193 * * * * * * * * * * 96 0 * * * * * * 1758 0 0 K 97 * * * 1823 * * * * 479 * * * * * * * * * * * 97 0 * * * * * * 1758 0 0 G 98 1837 * * * * 1193 * * * * * * 1823 * * * * * * * 98 0 * * * * * * 1758 0 0 Y 99 * * * * 1823 * 2201 * * * * * * * * * * * * 1000 99 0 * * * * * * 1758 0 0 G 100 * * * * * 0 * * * * * * * * * * * * * * 100 0 * * * * * * 1758 0 0 I 101 * * * * * * * 0 * * * * * * * * * * * * 101 0 * * 0 * * * 1071 0 0 //