HHsearch 1.5 NAME c5ip0C_ FAM FILE c5ip0C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5ip0C_.a3m DATE Fri Feb 10 02:20:23 2017 LENG 90 match states, 90 columns in multiple alignment FILT 17 out of 21 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4373 0.2696 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EDCEDEDEEBDDDBEDCDEECEEDCDECDEEEEEEEEEDEEDCCEDCEDDDDDBDEDCEDCDEECEDDCEECDEEDEEEEDDDEEEEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 972668999999989999999999998663346207899999999999999999999999999999999999999999999855774279 >Consensus xxPxrkfnxLxlxnxEkltxxQLeaarsYsdlgikdxxxlxsxxxxQxexxxxlsqklxxDaxkLxxlxxefxeexqklxaesvxxxtxx >c5ip0C_ AAPLTRYNQLLASNIEQLTRLQLASANAYAELGLQDTQSLAALGTVQLETASQLSRQMLDDIQKLSALGQQFKEELDVLTADGIKKSTGK >UniRef50_C8PYL0(18-101:198) Phasin family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL0_9GAMM E=3e-05 s/c=0.59 id=33% cov=84% -APWSRFNQAMLRNAEKMTDFSLETMRHYSEMGLEQLRNVSSVDSPeaassfnqkQTELLNQLGQKMLSDAQRLTELGNEIRNEV-------------- >UniRef50_Q1QUP7(19-108:150) Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUP7_CHRSD E=8e-05 s/c=0.53 id=30% cov=91% --PMRKFNGLMLDNMERMTEYQLDAMKRYSQLGVErmraasevkDAEGMRDFTTQQADMLNALSKQMLEDARAMADISLKFKSELEDMMAEA------- >UniRef50_A4BUJ3(18-112:131) ATP-dependent protease HslVU (ClpYQ), ATPase subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUJ3_9GAMM E=2e-18 s/c=0.98 id=32% cov=97% -APARKFNSLVIENAGKLAEFQVNAAYSYTDIGLRplrealqanDVDGLWRLVTSQNEAGRTLAAKLLADSQVLAGFGRDFGKEVEKLLAEDVVPS--- >UniRef50_Q2SJE2(18-107:120) ATP-dependent protease HslVU (ClpYQ), ATPase subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJE2_HAHCH E=7e-17 s/c=0.98 id=30% cov=91% --PVGKIGSLVVSNLERVAEFQMDAAKSYADLtmkqwkdiaDIKDVESLKNFAAGQAELASEISKKWVEDMKVLGDMGIEFKDEVEKILATS------- >UniRef50_A6B0K8(19-113:115) Phasin family protein n=61 Tax=Vibrionales RepID=A6B0K8_VIBPA E=4e-16 s/c=0.90 id=39% cov=97% --PYLKFNKLVTKNVEVLTELQLNAIRTYSEVGlnqmkaaseIKDVTSLTAFNSQQLSVLTKLSQQMMDDSNKLQAIAKEFKEDVEKMTSENLKTVT-- >UniRef50_A1WW25(19-117:122) Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WW25_HALHL E=1e-05 s/c=0.51 id=24% cov=93% ATPFHGVNSKMLEHWEKMADYQLDMARRYTDAtlgnlreasDVQSPEQLQSYLQKSVEAARETSDSLAKDARTLAELSQAMTEDLQQSMREG------- >UniRef50_Q0AB20(26-119:172) Phasin family protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB20_ALHEH E=3e-13 s/c=0.81 id=28% cov=91% --PVRRMMGLMLEGAEKYTQLQLDILSSWSDltfsqaratLEISDQKSLTDYLESRQKLAEQCNQKLNEDAGKLVDLGRDFGEQVRKLAAES------- >UniRef50_Q0A5E7(18-113:121) Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5E7_ALHEH E=4e-12 s/c=0.75 id=23% cov=98% SGPARSFAELSVNHLEALVSNQVELSKSYADLGFKQiraaldikaPQDVQSYIESQQDVARELGERVKADAEKVVSLNRKYAEEAQALTQKSVQAA--- >UniRef50_A1WYK0(18-112:155) Phasin family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WYK0_HALHL E=8e-12 s/c=0.75 id=21% cov=97% --PSRKLNALLLEHAEKVAHLNLEAARSYTDLameqmrkamEVRDPESFQSYLNDQGKVVQTMSNKLTENASTLADISKNMGEEVQKIAQENVSALT-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 589 * * * * * * * * * * * * * * 1576 * * * * 1 0 * * * * * * 2233 0 0 A 2 1174 * * * * 2680 * * * * * * * * * 2006 2720 * * * 2 0 * * * * * * 3154 0 0 P 3 * * * * * * * * * * * * 0 * * * * * * * 3 0 * * * * * * 3961 0 0 L 4 2390 * * * 2401 * * * * 4247 4160 * * * * 4032 4057 2529 3307 3110 4 0 * * * * * * 3961 0 0 T 5 * * * * * 4048 3779 * * 4086 * * * * 1057 3307 2590 * * 4060 5 0 * * * * * * 3961 0 0 R 6 2984 * * * * 3779 * * 1324 * * * * * 2167 2484 * * * * 6 0 * * * * * * 3961 0 0 Y 7 * * * * 951 * * 4048 * 3252 3857 * * * * * * 3779 * 2510 7 0 * * * * * * 3961 0 0 N 8 2959 * * * * 4048 * * * * 2954 553 * * * * * * * * 8 0 * * * * * * 3961 0 0 Q 9 3252 * * 3074 * 1992 * * 4086 * * * * 2227 * 1986 * * * * 9 0 * * * * * * 3961 0 0 L 10 3307 * * * * * * * 3779 378 4146 * * * * * * * * * 10 0 * * * * * * 3961 0 0 L 11 * * * * * 2984 * * * 2554 1545 * * * * 4005 * 1745 * * 11 0 * * * * * * 3961 0 0 A 12 3190 * * * * * * 4007 * 1089 * * * * * 4060 4086 2063 * * 12 0 * * * * * * 3961 0 0 S 13 * * 2590 1620 * * * * 2106 * * 4005 * * 3307 3144 * * * * 13 0 * * * * * * 3961 0 0 N 14 * * * * * 3857 1964 * * * * 717 * * * * * * * 3914 14 0 * * * * * * 3961 0 0 I 15 1769 * * * 3020 * * 2564 * 2451 4160 * * * * * 4512 4086 3779 * 15 0 * * * * * * 3961 0 0 E 16 4135 * * 183 * 4007 * * * * * * * * * * * * * * 16 0 * * * * * * 3961 0 0 Q 17 4005 * 4135 4146 * * * * 899 * * * * 4247 3103 * 4060 4086 * * 17 0 * * * * * * 3961 0 0 L 18 * * * * * * * * * 935 2122 * * * * * 4146 3040 * 3857 18 0 * * * * * * 3961 0 0 T 19 1962 * * * * * * 4057 * * * * * * * 4060 1149 2536 * * 19 0 * * * * * * 3961 0 0 R 20 * * 2524 2074 * * 4032 * 4060 * * 2476 * 3857 4247 2589 * * * * 20 0 * * * * * * 3961 0 0 L 21 * * * * 1902 * * 2985 * 1494 * 4005 * * * * * 4057 * 2957 21 0 * * * * * * 3961 0 0 Q 22 * * * * * * * * * * * 4032 * 255 * 3307 * * * * 22 0 * * * * * * 3961 0 0 L 23 * * * * 3914 * * * * 418 4048 * * * * * * 3006 * * 23 0 * * * * * * 3961 0 0 A 24 4247 * 1727 932 * * * * * * * 3046 * * * * * * * * 24 0 * * * * * * 3961 0 0 S 25 893 * * * * * * 3857 * 4005 3779 * * * 4512 3151 3307 * * * 25 0 * * * * * * 3961 0 0 A 26 1070 * * * * * * 4086 * 3857 2228 * * * * 4005 4057 4060 * * 26 0 * * * * * * 3961 0 0 N 27 * * * * * * * * 1468 * * 4247 * 4060 1341 3857 * * * 4007 27 0 * * * * * * 3961 0 0 A 28 2065 * * * * * 3307 * 4146 * * 4135 * * 2957 1478 4086 * * * 28 0 * * * * * * 3961 0 0 Y 29 * * * * * * * * * * * 3914 * * * * * * 3857 210 29 0 * * * * * * 3961 0 0 A 30 1588 * * * * * * * * * * * * * * 1536 1632 * * * 30 0 * * * * * * 3961 0 0 E 31 * * 1034 1561 * * * * * * * 4135 * 4160 * * 4060 * * * 31 314 2355 * 3170 170 * * 3961 1843 0 L 32 3779 * * * * * * 2510 * 757 3307 * * * * * * 4086 * * 32 312 2363 * 3170 170 * * 3961 2006 0 G 33 * * 2324 2394 * 713 * * * * * * * * * * * * * * 33 182 3073 * 3170 170 * * 3961 1577 0 L 34 * * * * 4005 * * 1257 * 1603 * * * * * * * 2397 * * 34 174 3140 * 3170 170 * * 3961 1463 0 Q 35 * * * 2672 * * * * 1104 * * * * 2994 2447 3857 * * * * 35 255 2626 * 3170 170 * * 3961 1955 0 D 36 * * 635 4057 * * * * * * * * * 2163 * 3779 * * * * 36 168 3188 * 3170 170 * * 3961 1693 0 T 37 4160 * * * * * * * * 4223 4135 * 1459 2885 * 4512 4247 2071 * * 37 0 * * * * * * 3961 0 0 Q 38 * * 4007 1747 * * * * 2532 * * 3914 * 2109 4223 * 3116 * * * 38 0 * * * * * * 3961 0 0 S 39 4397 * 2008 * * 2626 * * * * * 4223 * 3779 * 1267 * * * * 39 0 * * * * * * 3961 0 0 L 40 4397 * * * 3044 * * * * 731 3148 * * * * * * 3110 * * 40 0 * * * * * * 3961 0 0 A 41 3151 * * 4057 * * * 4146 4048 * * * * 1706 4160 3307 2967 4135 4007 * 41 0 * * * * * * 3961 0 0 A 42 3164 * 3001 4146 * * * * * * * 2494 * * 4007 1097 * * * * 42 0 * * * * * * 3961 0 0 L 43 * 4135 * * 1630 * 4060 * * 3122 * * * * * * * 4223 * 1352 43 0 * * * * * * 3961 0 0 G 44 4048 * 4223 * * 4247 * 4005 * 2301 4512 2619 * * * 4060 3148 2407 * * 44 0 * * * * * * 3961 0 0 T 45 4048 * * 2339 * * * * * * * 3252 * 2471 * 3153 1539 * * * 45 0 * * * * * * 3961 0 0 V 46 * * 4032 4512 * 2420 * * 1768 * * * 4223 3123 * 2370 * 4247 * * 46 79 4223 * 3170 170 * * 3961 1000 0 Q 47 * * * * * * * * * * * * * 221 3857 3779 * * * * 47 0 * * * * * * 3961 0 0 L 48 2532 * * * * 4032 * * * 2570 4060 4007 * 2386 3914 * 2787 3779 * * 48 0 * * * * * * 3961 0 0 E 49 * * 3080 779 * * * * 2057 * * * * * * 4086 * * * * 49 0 * * * * * * 3961 0 0 T 50 2358 * * * * * * * * 1554 4160 * * * * * 2590 2045 * * 50 0 * * * * * * 3961 0 0 A 51 1226 * * * 4146 4007 * * * 2212 3097 * * * * * * 3044 * * 51 0 * * * * * * 3961 0 0 S 52 * * * 2885 * * * * 4057 * * 2225 * 4032 2341 2205 3116 * * * 52 0 * * * * * * 3961 0 0 Q 53 4160 * * 1651 * * * * 2508 * * * * 2167 * * 2138 * * * 53 0 * * * * * * 3961 0 0 L 54 * 3857 * * 4060 * * 2979 * 712 4032 * * * * * 3779 * * * 54 0 * * * * * * 3961 0 0 S 55 4007 * * * * 1787 * * * * * 3857 * * * 788 * * * * 55 0 * * * * * * 3961 0 0 R 56 4007 * 3779 3031 * * * * 3103 * * 4032 * 965 4247 * * * * * 56 0 * * * * * * 3961 0 0 Q 57 * * * * * * * * 1499 * * * * 1608 2406 2951 * * * * 57 0 * * * * * * 3961 0 0 M 58 3914 * * * * * * * * 1233 1620 * * * * * * 3031 4048 * 58 0 * * * * * * 3961 0 0 L 59 3779 * * * * * * 3140 2406 1592 4086 3857 * * * * 3252 4048 * * 59 0 * * * * * * 3961 0 0 D 60 3006 * 2686 1474 * 2984 * * 2913 * * * * * * 3307 * * * * 60 0 * * * * * * 3961 0 0 D 61 * * 197 3914 * * * * * * * 4032 * * * * * * * * 61 0 * * * * * * 3961 0 0 I 62 755 * * * * 2528 * 4247 * * 4048 * * * * 3046 * * * * 62 0 * * * * * * 3961 0 0 Q 63 * * * 2406 * 3857 * * 2200 * * 4086 * 1858 2957 4032 * * * * 63 0 * * * * * * 3961 0 0 K 64 4160 * * * * * * * 1231 * 4057 * * * 2667 * 2492 3027 * * 64 0 * * * * * * 3961 0 0 L 65 * * * * * * * * * 517 3153 * * * * * * 2406 * * 65 0 * * * * * * 3961 0 0 S 66 1503 * * * * 4048 * * * * * * * 4086 * 2564 3307 1956 * * 66 0 * * * * * * 3961 0 0 A 67 1827 * 1723 2524 * 4007 * * * * * * * 4060 * 4005 4135 * * * 67 0 * * * * * * 3961 0 0 L 68 * * * * 4007 * * 2105 * 734 3261 * * * * * * * * * 68 0 * * * * * * 3961 0 0 G 69 3116 * * * * 1362 * * * * * 2406 * * * 2001 4135 * * * 69 0 * * * * * * 3961 0 0 Q 70 * * * 4512 * * * 4048 3059 4160 * 3307 * 1698 1980 * 4135 * * * 70 0 * * * * * * 3961 0 0 Q 71 3779 * 2387 1309 * * * * 3080 * * 4032 * 3373 * 4146 * * * * 71 0 * * * * * * 3961 0 0 F 72 * * * * 652 * * 3307 * 3914 2900 * * * * * * * * 4005 72 0 * * * * * * 3961 0 0 K 73 2406 * * * * 2082 * * 1317 * * * * * 3307 * 3779 * * * 73 0 * * * * * * 3961 0 0 E 74 * * 4048 1195 * 4146 * * 3238 * * 3307 * 3914 * 3148 4060 * * * 74 0 * * * * * * 3961 0 0 E 75 4060 * 2924 846 * * * * 4057 * * 3025 * 3857 * * * * * * 75 0 * * * * * * 3961 0 0 L 76 2008 * * * 4135 * * * * 1828 * * * * * * * 1277 * * 76 0 * * * * * * 3961 0 0 D 77 * * 2390 1620 * * * * * * * * * 1285 3766 * * * * * 77 0 * * * * * * 3828 0 0 V 78 3825 * 3922 2438 * * * * 1095 * * * * 3537 3980 * * 4032 * * 78 0 * * * * * * 3828 0 0 L 79 * * * * * * * 2934 * 746 2922 * * * * 3537 * 4185 * * 79 0 * * * * * * 3828 0 0 T 80 1589 * * * * * * * * 2922 2716 * * * * 4185 2339 2934 * * 80 0 * * * * * * 3828 0 0 A 81 1113 * * * * * * * 4185 * * * * 1893 3537 2973 * * * * 81 0 * * * * * * 3828 0 0 D 82 * * 2937 727 * * * * 3825 * * * * * * 3917 2963 * * * 82 0 * * * * * * 3828 0 0 G 83 2951 * 3898 * * 2763 * * * * * 2420 * * * 1091 * * * * 83 0 * * * * * * 3828 0 0 I 84 * * * * * * * 2269 * 3230 2280 * * * * * * 1059 * * 84 0 * * * * * * 3187 0 0 K 85 * * * * * * * * 1255 * * * * 2534 * 1890 * 2852 * * 85 0 * * * * * * 3012 0 0 K 86 1643 * * * * * * * 1836 * * * 2852 * * * 1936 * * * 86 0 * * * * * * 3012 0 0 S 87 1521 * * * * * * * * 2496 * * * * * 1664 * 2654 * * 87 0 * * * * * * 2937 0 0 T 88 * * * * * * * * * * * * * * * * 0 * * * 88 0 * * * * * * 2094 0 0 G 89 * * * * * 0 * * * * * * * * * * * * * * 89 0 * * * * * * 1000 0 0 K 90 * * * * * * * * 0 * * * * * * * * * * * 90 0 * * 0 * * * 1000 0 0 //