HHsearch 1.5 NAME c5iohB_ FAM FILE c5iohB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5iohB_.a3m DATE Thu Feb 9 19:37:07 2017 LENG 33 match states, 33 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.8 EVD 0.5152 4.9653 SEQ >ss_dssp CCCCCCCCCCCCBCCTTSCTTCCSBCCCCCCCC >sa_dssp EEEEEEEEDEEEDEDDEDEEEDCECDCDEEEEE >ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC >ss_conf 942058877876753117898840017886369 >Consensus krVsFGxxLsPExFDkxLPpntPlxrGxtPxxx >c5iohB_ KRVTFGEDLSPEVFDESLPANTPLRKGGTPVCK >UniRef50_UPI0000EC9EB6(156-188:298) Cell division cycle-associated protein 2 (Recruits PP1 onto mitotic chromatin at anaphase protein) (Repo-Man). n=2 Tax=Gallus gallus RepID=UPI0000EC9EB6 E=3e-09 s/c=1.90 id=76% cov=103% KKVTFGDDLSPEIFDKTLPANTPLRKGSTPVCR >UniRef50_A2CEF0(250-281:807) Novel protein n=2 Tax=Danio rerio RepID=A2CEF0_DANRE E=6e-05 s/c=1.52 id=67% cov=100% KRVRFGAPLSPEFFDKALPPSTPLQKGGTPRC- >UniRef50_Q498L4(367-396:1109) LOC734164 protein (Fragment) n=5 Tax=Xenopus RepID=Q498L4_XENLA E=0.0007 s/c=1.50 id=61% cov=94% KRVSFGGHLSPEFFDKRLPPNSPLQRGATP--- >UniRef50_P46013(504-536:3256) Antigen KI-67 n=12 Tax=Euteleostomi RepID=KI67_HUMAN E=4e-07 s/c=1.69 id=53% cov=103% RRVSFGGHLRPELFDENLPPNTPLKRGEAPTKR >UniRef50_UPI0001926DD5(195-224:1295) PREDICTED: similar to viral A-type inclusion protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001926DD5 E=3e-06 s/c=1.77 id=58% cov=94% KRVSFGAVLSPEYFDKRLPPSTPIRRGASP--- >UniRef50_UPI00016EA029(370-400:803) UPI00016EA029 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016EA029 E=6e-06 s/c=1.67 id=62% cov=97% KRVSFGSNLSPELFDKRMPPNSPLRKGATPR-- >UniRef50_C4QFJ6(429-461:1770) Expressed protein n=1 Tax=Schistosoma mansoni RepID=C4QFJ6_SCHMA E=0.0001 s/c=1.45 id=56% cov=103% RGVSFGPPLSPERFDKSLPPSTPVKRGGTPLVK >UniRef50_D2DGW1(452-481:1098) Cell division cycle associated 2 n=1 Tax=Xenopus laevis RepID=D2DGW1_XENLA E=1e-06 s/c=1.81 id=77% cov=94% KRVTFGKALSPELFDRFLPANTPLRRGGTP--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 499 * * * * * 1775 * * * * * 1 0 * * * * * * 1779 0 0 R 2 * * * * * 3596 * * 2731 * * * * * 383 * * * * * 2 0 * * * * * * 1779 0 0 V 3 * * * * * * * * * * * * * * * * * 0 * * 3 0 * * * * * * 1779 0 0 T 4 * * * * * * * * * * * * * * 3645 667 1784 * * * 4 0 * * * * * * 1779 0 0 F 5 * * * * 0 * * * * * * * * * * * * * * * 5 0 * * * * * * 1779 0 0 G 6 * * * * * 0 * * * * * * * * * * * * * * 6 0 * * * * * * 1779 0 0 E 7 2655 * 3601 2931 * 1663 * * 3703 * * * 3596 * * 3677 * 3752 * * 7 0 * * * * * * 1779 0 0 D 8 3703 * 2782 * * * 1646 * * * * 3677 2620 * 3826 * * 3664 * 3875 8 0 * * * * * * 1779 0 0 L 9 * * * * * * * * * 0 * * * * * * * * * * 9 0 * * * * * * 1779 0 0 S 10 * * * * * * * * 3826 * * * * * 2846 339 * * * * 10 0 * * * * * * 1779 0 0 P 11 * * * * * * * * * * * * 0 * * * * * * * 11 0 * * * * * * 1779 0 0 E 12 * * * 0 * * * * * * * * * * * * * * * * 12 0 * * * * * * 1779 0 0 V 13 * * * * 2834 * * 3601 * 1045 * * * * 3596 * * 2931 * 3664 13 0 * * * * * * 1779 0 0 F 14 * * * * 0 * * * * * * * * * * * * * * * 14 0 * * * * * * 1779 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1779 0 0 E 16 * * * 1553 * * * * 780 * * * * * 3703 * * * * * 16 0 * * * * * * 1779 0 0 S 17 3645 * * * 3703 * * * * * * 2254 * * 1861 1858 3601 * * * 17 0 * * * * * * 1779 0 0 L 18 * * * * * * * * * 117 3677 * * * * * * * * * 18 0 * * * * * * 1779 0 0 P 19 * * * * * * * * * * * * 0 * * * * * * * 19 0 * * * * * * 1779 0 0 A 20 1784 * * * * * * * * * * * 495 * * * * * * * 20 0 * * * * * * 1779 0 0 N 21 * * * * * * * * * * * 399 * * * 2050 * * * * 21 0 * * * * * * 1779 0 0 T 22 * * * * * * * * * * * * * * * 1952 432 * * * 22 0 * * * * * * 1779 0 0 P 23 * * * * * * * * * * * * 0 * * * * * * * 23 0 * * * * * * 1779 0 0 L 24 * * * * * * * 3664 * 388 * * * * * * * 2672 * * 24 0 * * * * * * 1779 0 0 R 25 * * * * * * * * 1278 * * * * 2834 1160 * * * * * 25 0 * * * * * * 1779 0 0 K 26 * * * * * * * * 1404 * * * * * 684 * * * * * 26 0 * * * * * * 1779 0 0 G 27 * * * * * 0 * * * * * * * * * * * * * * 27 0 * * * * * * 1779 0 0 G 28 1567 * * 2254 * 1432 * * * * * * * * * 3601 * * * * 28 0 * * * * * * 1779 0 0 T 29 3026 * * * * * * 4010 * * * * * * * 2707 595 * * * 29 0 * * * * * * 1779 0 0 P 30 * * * * * * * * * * * * 0 * * * * * * * 30 0 * * * * * * 1779 0 0 V 31 * * * * * * * * * 2701 * * * * 1236 * 2758 1868 * * 31 0 * * * * * * 1753 0 0 C 32 * 833 * * * * * * 2122 * * * * * * * * 2259 * * 32 0 * * * * * * 1698 0 0 K 33 * * * * * * * * 1029 * * * * * 971 * * * * * 33 0 * * 0 * * * 1636 0 0 //