HHsearch 1.5 NAME c5inwD_ FAM FILE c5inwD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5inwD_.a3m DATE Thu Feb 9 18:20:58 2017 LENG 32 match states, 32 columns in multiple alignment FILT 110 out of 277 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4838 2.6631 SEQ >ss_dssp CCCCCCCSCEEEEEECTTTCCEEEEEEECSCC >sa_dssp EEEEEEEEEDEDEEDDEEEEDDEEEDEDDEEE >ss_pred CCEEEECCCEEEEEEECCCCCEEEEEEEECCC >ss_conf 95599649859999988998879999860789 >Consensus PxxxxxdrPFlfxIxxxxtxxiLFxGxvxxPx >c5inwD_ PPTVTVDRPFVVLIYDEKTRAVIFMGRVADPK >UniRef50_UPI0000E80696(388-417:425) PREDICTED: similar to Serpina1d-prov protein n=1 Tax=Gallus gallus RepID=UPI0000E80696 E=0.0005 s/c=1.51 id=39% cov=97% -PIIEFNRPFLMLIFDRDTNSTLFIGKIANP- >UniRef50_P33831(343-373:373) Serine proteinase inhibitor 3 n=44 Tax=root RepID=SPI3_VARV E=1e-05 s/c=1.65 id=34% cov=100% PEELEFNTPFVFIIRHDITGFILFMGKVESP- >UniRef50_P50454(379-410:418) Serpin H1 n=44 Tax=Euteleostomi RepID=SERPH_HUMAN E=3e-06 s/c=1.65 id=33% cov=103% PKLFYADHPFIFLVRDTQSGSLLFIGRLVRPK >UniRef50_B4PS84(391-422:428) GE26405 n=1 Tax=Drosophila yakuba RepID=B4PS84_DROYA E=6e-06 s/c=1.62 id=36% cov=103% PSKFNCNHPFVFLIYDERVNTILFAGVYSNPR >UniRef50_Q0E8C8(417-448:450) CG6680, isoform A n=16 Tax=Drosophila RepID=Q0E8C8_DROME E=1e-05 s/c=1.58 id=36% cov=103% PPKFLLNRPFQYMIVEKATGLLLFAGQVRNPK >UniRef50_C1C4M6(379-410:412) Alpha-1-antiproteinase n=1 Tax=Rana catesbeiana RepID=C1C4M6_RANCA E=2e-05 s/c=1.58 id=36% cov=103% PFQVIADRPFLITILHKPTNTILFTGRIMKPE >UniRef50_B9GA19(390-420:423) Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9GA19_ORYSJ E=0.0003 s/c=1.48 id=34% cov=100% PVDFVAEHPFAYFIVEEMSSAVVFAGHIVDP- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 4353 0 0 P 2 4532 * 5632 4253 3515 * * 3571 5181 4219 * 5935 1548 7085 4806 6195 5896 2411 * 6442 2 36 5333 * 1812 483 * * 4582 1529 0 T 3 6346 * 3621 2984 6663 * 5164 5335 3747 4714 5459 * 3732 5662 2877 3608 2993 3023 7091 6262 3 8 7480 * 0 * * * 4603 1000 0 V 4 * * * * 1118 * * 3245 * 2879 3331 * * * * * * 2504 * 5487 4 0 * * * * * * 4516 0 0 T 5 5690 6553 * 3567 5572 * 3979 2840 3105 4765 * 5505 * 5690 2750 4782 3118 2843 * 5182 5 0 * * * * * * 4534 0 0 V 6 1654 3578 * * 2856 * * 3300 * 3595 6768 * * * * * * 1992 * 6008 6 0 * * * * * * 4400 0 0 D 7 * * 1048 5155 * * * * * * * 1213 * * * 6131 6466 5003 * * 7 0 * * * * * * 4400 0 0 R 8 * * * * 6251 * 1654 * 3830 * * 6428 * 4399 976 5744 6293 * * * 8 0 * * * * * * 4400 0 0 P 9 5086 * * * * * * * * * * * 71 * * 5754 * * * * 9 0 * * * * * * 4400 0 0 F 10 * * * * 34 * * * * * * * * * * * * * * 5428 10 0 * * * * * * 4400 0 0 V 11 3993 * * * 4197 * 5271 2916 * 982 3872 * * 6718 * * * 2943 * 6635 11 0 * * * * * * 4400 0 0 V 12 * 6449 * * 795 * * 5842 * 2949 6609 * * * * * * 4245 6396 2393 12 0 * * * * * * 4400 0 0 L 13 3456 5865 * * 1677 * * 3669 * 2870 3138 * * 6646 * 6578 4664 2957 * 4026 13 0 * * * * * * 4400 0 0 I 14 * * * * * * * 375 * 4822 4596 * * * * * * 2714 * * 14 0 * * * * * * 4400 0 0 Y 15 5927 * * 3399 4256 * 4354 5954 4051 4687 4927 * * 4185 1834 5168 5648 3093 * 2848 15 12 * 6891 * * * * 4400 0 0 D 16 * * 1230 2493 * * 1739 * 6277 * * 4273 * 6259 * 5743 * * * * 16 0 * * * * 0 * 4395 0 1000 E 17 6155 * 3643 2757 * 6610 4738 6005 2961 6765 5865 2789 6008 5340 2258 4591 4143 4387 * * 17 0 * * * * * * 4400 0 0 K 18 3176 * 4824 3415 6766 6551 5844 5745 3247 5181 6731 5827 2207 4637 3860 3893 3242 4723 * 6968 18 0 * * * * * * 4400 0 0 T 19 5292 * * * 6899 * * 5600 6551 4534 6895 4480 * * * 2299 715 6675 * 5949 19 0 * * * * * * 4400 0 0 R 20 6606 * 3201 5238 6873 1144 6766 * 3817 7032 * 2799 * 5326 3838 4132 * * 6610 * 20 0 * * * * * * 4400 0 0 A 21 2742 5170 6970 * 6293 6610 * 5944 * 3269 4440 4743 * 5863 6527 2064 1862 4441 * * 21 0 * * * * * * 4400 0 0 V 22 * 6968 6527 * * * * 1149 * 3108 6702 6008 3304 5744 * 6586 3777 2593 5644 * 22 0 * * * * * * 4400 0 0 I 23 6551 * * * 6670 * * 4436 * 306 6499 * * * * 6602 * 3569 * 5750 23 0 * * * * * * 4400 0 0 F 24 * * * * 150 * 6608 6155 * 5280 6276 * * * * * * 6708 * 5263 24 0 * * * * * * 4400 0 0 M 25 2946 6555 * 6798 4412 * * 3360 * 2425 1692 * * * * 5569 4363 3123 6646 5956 25 0 * * * * * * 4400 0 0 G 26 4852 * * * * 51 * * * * * * * * * * * * * * 26 0 * * * * * * 4400 0 0 R 27 6213 * * 5099 * * 4041 5611 1536 * 6518 * * 3833 1605 5011 4572 4369 * * 27 0 * * * * * * 4394 0 0 V 28 * * * * 3962 * * 2228 * 4286 5810 * * * * * * 809 * 3598 28 0 * * * * * * 4168 0 0 A 29 4169 * 4956 4096 6671 * 5470 4708 5461 3975 2913 3727 * 6792 4319 3087 3200 2588 * 4769 29 0 * * * * * * 4155 0 0 D 30 * * 1360 3694 * 6097 5905 * 4187 * * 1768 * 6540 5066 3466 * 6449 * 6544 30 0 * * * * * * 4154 0 0 P 31 * * * * * * * * * * * * 0 * * * * * * * 31 0 * * * * * * 4150 0 0 K 32 * * * 1828 * * * * 1632 * * * * 2553 2150 * * * * * 32 0 * * 0 * * * 3848 0 0 //