HHsearch 1.5 NAME c5hy7D_ FAM FILE c5hy7D_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5hy7D_.a3m DATE Thu Feb 9 11:32:27 2017 LENG 55 match states, 55 columns in multiple alignment FILT 29 out of 33 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4441 1.5703 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCHHHHHHHHHHHTSCSSCCCCC >sa_dssp EDCEEDAEDDDEDCDDBCEEEEDBDEDAEEEECEDEEBDCCBDEDCEDCCDEDEE >ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC >ss_conf 9799998664887999721144689999855875889999999999500489888 >Consensus TkxEWxxnvxRDTxaSxigHxxxLxYxalaxnexxxrxrxxlleKMxxPcgppPp >c5hy7D_ TSWEWKTNIHRDTYSSIVGHPPLLSYMALAQNEPVAKFRVQMIRKMLQPVGPPPP >UniRef50_C4M9T8(29-83:100) Splicing factor 3B subunit 10, putative n=2 Tax=Entamoeba RepID=C4M9T8_ENTHI E=2e-19 s/c=1.75 id=39% cov=102% SKYEWICNQQRDSYASYIGHHSLMAYIAVAENQSIGRTRYQFLERMCDPCGKPPP >UniRef50_A2DPN8(31-84:100) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DPN8_TRIVA E=1e-13 s/c=1.43 id=35% cov=100% -KREWRENQVRESLATILLLPGFLSYQSMGLGQPEIVVKTNLIDKMVQPCGPAPP >UniRef50_C4QWK3(27-73:89) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QWK3_PICPG E=6e-13 s/c=1.60 id=42% cov=87% TRKEWLDNIAKDTYATLVQHNPMLEYLSIGLNKPQAITKFEMIEKMA-------- >UniRef50_Q6BLV4(27-76:85) DEHA2F10406p n=6 Tax=Saccharomycetales RepID=Q6BLV4_DEBHA E=9e-12 s/c=1.42 id=41% cov=93% TREEFMTNVNRDIYSSLAQHDNILYYNSVIINEPMELLRQKMIKKMASPI----- >UniRef50_B5RSI9(27-79:87) KLLA0A11605p n=1 Tax=Kluyveromyces lactis RepID=B5RSI9_KLULA E=6e-09 s/c=1.17 id=38% cov=96% TKEEWSNTISKDTYASLAIHQNLLEYYTLASGFPSKRdAQLTLLRKLANP--PKP- >UniRef50_Q4FW59(32-82:84) Putative uncharacterized protein n=6 Tax=Trypanosomatidae RepID=Q4FW59_LEIMA E=7e-11 s/c=1.34 id=33% cov=95% TKDDWMRYQHRDTLATIIEHRDQLEYLCVAENLPPAKMERILLERMVAPIA---- >UniRef50_A3FQN7(33-76:85) Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQN7_CRYPV E=2e-09 s/c=1.45 id=40% cov=82% ---EWGDNILRDTASSNIMHQSRISYFAIAENTSKARISFRMLESMI-------- >UniRef50_P0C074(27-73:85) RDS3 complex subunit 10 n=3 Tax=Saccharomyces cerevisiae RepID=YSF3_YEAST E=1e-07 s/c=1.23 id=26% cov=85% TREQWQRNVRNDTLNTLQGHSASLEYVSLSRGDLSIRdTRIHLLKSM--------- >UniRef50_B4UN39(7-60:67) Similar to uniprot|P0C074 Saccharomyces cerevisiae YNL138wa YSF3 n=1 Tax=Candida glabrata RepID=B4UN39_CANGA E=1e-08 s/c=1.12 id=33% cov=89% ---EWLLKVRRDTISSMIQHSGLNEYIMLAKGDDCRRtTQIDLIEKYCNsfPAG---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 2078 390 * * * 1 0 * * * * * * 3549 0 0 S 2 * * * * * * * * 950 * * * * 4806 1384 5086 4881 * * * 2 0 * * * * * * 3833 0 0 W 3 * 4498 3315 1850 5245 * 3652 * 4709 4872 * * * 4745 3873 * * * 3537 2266 3 0 * * * * * * 3833 0 0 E 4 * * 4409 207 * * * * * * * * * 4353 * * * 4729 * * 4 0 * * * * * * 3901 0 0 W 5 * * * * 4093 * * * * * * * * * * * * * 87 * 5 0 * * * * * * 3901 0 0 K 6 3579 * * * * 4799 * 5323 5430 1475 2485 4729 * 3625 3932 4371 5396 4740 * * 6 0 * * * * * * 3901 0 0 T 7 * 5323 3313 3932 * * * * * 4240 * 3539 * * 3381 3634 1602 2608 * * 7 0 * * * * * * 3901 0 0 N 8 * * * * * * 3951 * 4240 * * 494 * 4399 * 5084 4371 * * 4409 8 0 * * * * * * 3901 0 0 I 9 * * * * * * * 1669 * * * * * 1492 * * * 1600 * * 9 0 * * * * * * 3901 0 0 H 10 3939 * * * * * 1125 * * 3453 * 3439 * 3698 3295 4371 * 3932 * * 10 0 * * * * * * 3901 0 0 R 11 * * * * * * * * 3146 * * 4353 * * 255 * * * * * 11 0 * * * * * * 3901 0 0 D 12 * * 98 3932 * * * * * * * * * * * * * * * * 12 0 * * * * * * 3901 0 0 T 13 * * * * * * * 4093 * * * * * * * 1857 588 * * * 13 0 * * * * * * 3901 0 0 Y 14 3430 * * * * * * 4240 * 1553 * * * * 4740 * * * * 1070 14 0 * * * * * * 3901 0 0 S 15 1033 5474 * * * * 5092 * * * * 2944 * * * 1724 * * * 5213 15 0 * * * * * * 3901 0 0 S 16 5310 * * * 4740 * * * * * * * * * * 429 2362 * * * 16 0 * * * * * * 3901 0 0 I 17 * * * * 5090 * 3110 2881 * 1616 3636 3888 * 4740 * * * 5252 * 2464 17 0 * * * * * * 3901 0 0 V 18 2901 * * * * * * 1558 * 3147 3475 * * 3160 * * * 2239 * * 18 0 * * * * * * 3901 0 0 G 19 5092 * * 4409 * 907 * 4371 * 3932 4799 * * 2790 * 3381 * * * * 19 0 * * * * * * 3901 0 0 H 20 * * * * * * 98 * * 3932 * * * * * * * * * * 20 0 * * * * * * 3901 0 0 P 21 * * 4093 * 4250 5310 3996 * * * * 4919 2085 3569 4409 1897 * * * 2917 21 0 * * * * * * 3901 0 0 P 22 2944 * 3066 * * 2202 * * * * * 2920 2957 * * 2029 5185 * * * 22 0 * * * * * * 3901 0 0 L 23 * * * * 3398 * * 3496 * 1627 3059 5185 * 3903 2611 3599 * 4960 * * 23 0 * * * * * * 3901 0 0 L 24 * * * * * * * 4799 * 302 3996 3468 * * * * * * * * 24 0 * * * * * * 3901 0 0 S 25 2567 * 5310 1643 * * * * * * * 4250 * 4399 * 1987 4740 4729 * 4093 25 0 * * * * * * 3901 0 0 Y 26 * * * * 5056 * 4960 * * 5090 * * * * * * * * * 139 26 0 * * * * * * 3901 0 0 M 27 4399 * * * 1769 * * 2747 * 2609 2999 4093 * 3932 * * * 4353 * 4371 27 0 * * * * * * 3901 0 0 A 28 1043 3560 * * * * * * * * 4240 * * * * 1761 3610 * * * 28 0 * * * * * * 3901 0 0 L 29 * * * * * * * 2536 * 1442 3932 * * * * * 3451 1724 * * 29 70 4399 * 0 * * * 3901 1000 0 A 30 986 5056 * * * 2298 * 4093 * * * * * * * 3720 * 2972 * * 30 0 * * * * * * 3901 0 0 Q 31 * * * 1312 * * * 4093 3530 2672 4287 * 4399 3333 4353 4371 * * * * 31 0 * * * * * * 3901 0 0 N 32 * * * * * 1390 * * * * * 896 * * 4895 * 4399 * * * 32 0 * * * * * * 3901 0 0 E 33 4895 * 2957 1243 4371 * * * 4919 4409 * * * 2812 4399 5092 3888 * * * 33 0 * * * * * * 3901 0 0 P 34 4328 * 4240 * * * * * * 4353 * 3701 1350 * * 1785 3491 * * * 34 0 * * * * * * 3901 0 0 V 35 * 4240 * 3356 * * * 3893 2436 * 3376 * 4409 4919 3456 2418 4983 3172 * * 35 0 * * * * * * 3901 0 0 A 36 1462 4729 * 3602 * 3370 * 3127 2576 5185 * * * * 4240 4983 * 5252 * * 36 0 * * * * * * 3901 0 0 K 37 * * * 3224 * * * 4919 3024 4093 * * * 5252 769 * * 3932 * * 37 396 2059 * 0 * * * 3901 2201 0 F 38 4371 * * 5468 5430 * * 3374 * 2991 4409 * * * * * 1272 2167 * * 38 0 * * * * * * 3901 0 0 R 39 * * * 3756 * * * * 2631 * * * * 3304 673 4799 * * * * 39 0 * * * * * * 3901 0 0 V 40 * * * * 2441 * * 2614 5252 2812 * * * 4093 4409 * 3099 4138 * 2289 40 0 * * * * * * 3901 0 0 Q 41 4399 * 3530 4243 * * 4353 4409 3014 * 5396 1950 * 3189 2709 * 4371 * * * 41 0 * * * * * * 3901 0 0 M 42 * 5111 * * 2335 * * * * 939 2172 * * * * * 5090 * * * 42 0 * * * * * * 3901 0 0 I 43 * * * * * * * 1472 * 952 3734 * * * * * * 4399 * * 43 0 * * * * * * 3901 0 0 R 44 * * 3356 1226 * * * * 2869 * * 3315 * 4279 3806 4399 3898 * * * 44 0 * * * * * * 3901 0 0 K 45 * * * * * * * * 597 * * 5095 * 5017 2643 3077 * * * * 45 0 * * * * * * 3937 0 0 M 46 * * * * * * * * * 3148 258 * * * * * * * * 4291 46 74 * 4323 * * * * 3937 0 0 L 47 2132 2606 4740 * * * * 2463 * 3119 * * * * * 5014 4725 2286 * * 47 0 * * * * * 0 3802 0 1000 Q 48 3898 * 4946 * * * * * 4486 3290 4934 2943 * 1549 3605 3251 4013 * * * 48 181 3817 4416 1000 1000 * 0 3630 1000 1000 P 49 * * * * * 4523 * * * * * * 168 * * * 3906 * * * 49 105 * 3830 * * 0 * 3563 0 1552 V 50 3109 821 * * * * * 2759 * * * * * * * * * 2554 * * 50 0 * * * * * 0 3582 0 1000 G 51 3021 * * * * 386 * * * * * * * * * * * 3165 * * 51 0 * * * * 0 * 3424 0 1000 P 52 * * * * 4255 3749 * * 4570 4772 * 4253 555 * * * 4025 * * * 52 0 * * * * * * 3280 0 0 P 53 2856 * * * * * * * 2732 * * * 630 3937 * * * * * * 53 0 * * * * * * 3185 0 0 P 54 * * * * * * * * * * * * 0 * * * * * * * 54 0 * * * * * * 2967 0 0 P 55 * * * * * * * * * * * * 0 * * * * * * * 55 0 * * 0 * * * 2243 0 0 //