HHsearch 1.5 NAME c5gank_ FAM FILE c5gank_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5gank_.a3m DATE Sat Jan 30 08:35:08 2016 LENG 80 match states, 80 columns in multiple alignment FILT 105 out of 509 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.4 EVD 0.3987 -1.7044 SEQ >ss_dssp CCCCCCCSTTTTCSCEEEEEETTSCEEEEEBCCCCTTCCCBBSSBCCBCCCCCCCCCCCCBCCBCCSTTEEEEEEEECCC >sa_dssp EEDEEDEECEECDDCCADACBEEDDCBCACADDEDEEDCACADCBCCCDDDEEEDDEDEECECEBECEDBEDCDCCDECE >ss_pred CCCCCCHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCC >ss_conf 97787415899789869999919909999999997868829831699994588863677527998799289999728879 >Consensus mxxxxxxxLxxxixxxVxVxlxdgrxxxGxLxxxDxxxNivLxxxxExxxxxxxxxxrxlgxvxIRGxxIvxixvxxxpx >c5gank_ IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKIKVEKRVLGLTILRGEQILSTVVEDKPL >UniRef50_A9CRN0(41-106:136) U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Enterocytozoon bieneusi H348 RepID=A9CRN0_ENTBH E=3e-13 s/c=1.15 id=20% cov=82% ---------SSYVDKNVVVILKDNSLLYGTLKSYDQYNNISLNYAVQRIFHNNQYAEKMIGFIVIRGDTIVMIS------ >UniRef50_Q5KN63(20-91:95) Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KN63_CRYNE E=1e-06 s/c=0.76 id=23% cov=75% ---------------RVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVvdvteegqplPPRIERRTAEMLFVRGDGVILLS------ >UniRef50_C0H529(1-71:116) Small nuclear ribonucleoprotein (SnRNP), putative n=6 Tax=Plasmodium RepID=C0H529_PLAF7 E=0.001 s/c=0.63 id=25% cov=85% MSVGIPIKlLHEGIGHTISVETKSGILYRGTLLFAEDNMNCLLENV---SVVKKDGKQILLEQVYIRGGSV---------- >UniRef50_D2UXW3(2-83:89) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2UXW3_NAEGR E=1e-12 s/c=0.90 id=24% cov=99% VQSNQYPELKVYMNKRLSVKMNGKRHVEGTMIGFDPFMNITLENAYDLTGFSKGEantnEKTHLGTVVVRGNSIEMMECLDP-- >UniRef50_A9A125(1-78:81) Like-Sm ribonucleoprotein core n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A125_NITMS E=8e-11 s/c=0.87 id=23% cov=92% MSQSNSAKrplttLQKSTKKKVTVRLKNEVEYKGKMDNVDSYMNLIMTDAEELH---EGKTIANYGRVIVRGNNVLFIKLE---- >UniRef50_Q9BL76(26-98:103) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q9BL76_CAEEL E=1e-09 s/c=0.88 id=23% cov=91% -------KVLEYIGKRYEIRMTDGRYIRGTMIATDKDANMVFNKADERWDKDPQLKgVRFLGQAMISKKHVESMHALPDP- >UniRef50_Q8IL38(14-87:101) Small nuclear ribonucleoprotein, putative n=4 Tax=Plasmodium RepID=Q8IL38_PLAF7 E=2e-06 s/c=0.72 id=21% cov=91% --------MDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANNVKKVNKIKKLLLNGLNITIMVPGGTPV # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 * * * * * * * 3539 * * 484 * * * * * * 2330 * * 1 0 * * * * * * 4019 0 0 Q 2 * * 3716 * * * * * * * * * * 1772 * 1113 2569 * * * 2 0 * * * * * * 4533 0 0 V 3 2683 * * * * * * 3622 * 4251 2700 * 4446 3979 * 2899 * 1674 * * 3 0 * * * * * * 4878 0 0 A 4 4484 * * * * 1898 * * * * * 2582 2090 * * 2464 * 3265 * * 4 0 * * * * * * 4730 0 0 H 5 3432 * * 2954 * 4297 4484 3902 3523 * * 4038 * 3979 2289 3443 3213 * * * 5 100 3903 * 1000 1000 * * 4730 1000 0 S 6 4555 * * * * 4816 * * 3184 * * 3767 2926 * 3323 1362 4741 4916 * 4399 6 97 4865 5036 1585 585 * * 4973 1000 0 S 7 2456 * * * * * * 3885 4038 5044 * * 3078 4880 4416 1569 3326 * * 5446 7 51 4845 * 0 * 0 * 5408 1000 1000 R 8 4391 * 4714 3074 4190 5210 * * 1499 4959 4271 4515 * * 3959 3066 5335 * * 5405 8 141 3424 * 1924 441 * * 5574 2050 0 L 9 * * * * 4764 * * 3622 * 366 4574 * 6281 * * * * 4284 * * 9 0 * * * * * * 6498 0 0 A 10 4054 * 6146 2670 * 5958 5232 * 2380 3847 3699 3815 * 2916 4307 3974 5345 4475 * * 10 0 * * * * * * 6569 0 0 N 11 4533 * 3428 3072 * 4508 6064 * 2312 * * 2704 6504 4618 5278 2313 4597 6476 * * 11 0 * * * * * * 6697 0 0 L 12 5372 5220 * 4998 2776 5999 5007 5455 * 1805 5113 5671 6320 6664 * 4387 6231 5756 3751 2387 12 0 * * * * * * 6732 0 0 I 13 6169 * * * * * * 1814 4851 1390 4722 6353 * * * 5729 4922 2560 6182 * 13 16 6509 * 2000 415 * * 6699 1000 0 D 14 * * 2475 3735 5838 1588 6107 * 5181 * * 2022 * 4070 5576 5258 * * * * 14 0 * * * * * * 6719 0 0 Y 15 5188 * 6785 4004 5096 6348 3813 * 1531 5769 6504 6521 * 3707 3006 4045 3141 * * 5206 15 0 * * * * * * 6713 0 0 K 16 * 5628 * 3562 * * 5940 5280 2615 5037 * 4586 4071 5084 2086 3972 2646 4298 * 5724 16 0 * * * * * * 6679 0 0 L 17 * * * * 6625 * * 2233 * 2920 4817 * * * * 4895 6577 862 * 6011 17 0 * * * * * * 6694 0 0 R 18 * 6299 7001 5223 5811 * 4786 3539 3921 2939 6549 5841 * 5262 1993 3373 3760 3246 5135 7246 18 11 7102 * 2000 415 * * 6708 1000 0 V 19 * 5255 * * * * * 1585 * 4543 * * * * * * 6197 776 * * 19 0 * * * * * * 6713 0 0 L 20 5879 * 5876 2398 5668 5936 4091 3123 2630 4909 4606 * * 4801 3312 5541 3612 3600 * 6854 20 0 * * * * * * 6713 0 0 T 21 5543 5650 * * 5190 * * 3339 * 901 4140 * * * * 6685 2396 4632 * * 21 23 5972 * 1585 585 * * 6713 1095 0 Q 22 4744 6535 5084 5397 * 6202 5575 5351 1980 5211 * 3700 5902 4741 2280 3970 3198 4653 * 6705 22 25 5872 * 0 * * * 6713 1437 0 D 23 * * 1397 4506 * 3424 5545 6237 4770 * * 1880 6202 * * 3566 4949 * 6691 * 23 0 * * * * * * 6713 0 0 G 24 5458 * 3148 4067 * 862 7019 * 5798 * * 3046 * 5137 4997 4909 7167 * * 6987 24 10 7251 * 1000 1000 * * 6713 1000 0 R 25 5964 * 5706 4900 * 6878 5223 4765 3186 4432 5760 * * 5638 1135 3393 3740 5059 * 6778 25 23 5972 * 0 * * * 6713 1095 0 V 26 5074 4817 6216 2648 5323 6803 5982 3559 4694 3451 5007 5697 * 4261 4881 4047 3481 2985 * 3569 26 15 6635 * 3459 138 * * 6759 1000 0 Y 27 5948 * * * 2773 * * 2320 * 1712 * * * * * * 6188 3432 * 2148 27 21 6104 * 2000 415 * * 6759 1084 0 I 28 * * 6369 2605 * * 4462 3246 4153 4362 * 5761 * 5058 2478 4239 3527 2656 * 4592 28 0 * * * * * * 6759 0 0 G 29 4901 * * * * 49 * * * * * * * * * * * * * * 29 11 6986 * 2585 263 * * 6762 1000 0 Q 30 6698 * 5657 4805 5423 * 6277 2687 3633 4066 6566 * * 4157 3800 6794 1806 2632 * 6923 30 13 6808 * 2000 415 * * 6762 1000 0 L 31 * * * * 2808 * * 3377 * 628 4095 * * * * 6561 5953 5127 * * 31 0 * * * * * * 6762 0 0 M 32 5148 5692 6168 3182 6427 * 4374 3081 2800 3817 4523 4997 * 4180 3886 5577 3803 2928 * 6137 32 0 * * * * * * 6762 0 0 A 33 2113 2966 6278 5240 6607 2247 * * * 6229 6994 3833 * 5370 * 2371 4372 6371 * 6458 33 0 * * * * * * 6762 0 0 F 34 6607 4705 * * 1881 * * 3282 6470 4391 * * * * * 5176 3635 2208 * 2368 34 0 * * * * * * 6762 0 0 D 35 * * 213 3899 * 6208 * * * * 5989 6229 * * * 6492 * 5900 * * 35 21 * 6137 * * * * 6762 0 0 K 36 5132 6174 4059 3177 * 3894 4444 5145 2582 7110 5629 3690 4154 2873 3638 3969 5787 5738 * * 36 9 7315 * 0 * * 0 6724 1000 1000 H 37 7301 * 3628 6224 2750 5072 2423 * 6260 3957 * 3946 6871 3560 5142 4287 4180 * 6595 2700 37 0 * * * * * 0 6724 0 1000 M 38 3641 5146 * 6346 3923 3464 * 6669 5026 3124 1485 5666 * 5122 6180 5007 4429 5179 4955 6555 38 0 * * * * * 0 6724 0 1000 N 39 * * 4087 * * 6355 6270 * * * * 162 * * * 5496 * * * * 39 0 * * * * * 0 6724 0 1000 L 40 * 4827 * * 4809 * * 1968 * 1648 2977 * * * * * 4205 2650 * 6174 40 0 * * * * * 0 6724 0 1000 V 41 5080 6734 * * 4996 * 4685 2350 5917 3150 * * * 6708 6831 4731 3508 1357 6402 5705 41 0 * * * * 0 * 6724 0 1000 L 42 * * * * 5228 * * 3710 * 273 4164 * * * * * * 6191 * * 42 17 6427 * 0 * * * 6762 1000 0 N 43 5303 * 3210 3409 6360 5638 * 5872 3270 5424 * 3883 * 4327 3643 2039 3036 5435 * 6624 43 14 * 6738 * * * * 6762 0 0 E 44 6714 * 1591 2767 * 6505 5053 * 4906 * 6905 1917 6102 4058 6188 4176 * * * 5616 44 53 6894 5179 1000 1000 * 0 6751 1000 1000 C 45 1563 2173 * * 6090 6775 * * * * * * * * * 4317 3546 1836 * * 45 110 * 3768 * * 369 2148 6742 0 2636 I 46 6795 5315 4231 3086 * 6289 5140 2959 3470 6522 * * * 5721 4918 5073 2567 2219 5187 5003 46 180 * 3095 * * 2796 224 6709 0 3672 E 47 * * 4421 485 * * 5337 4257 * 5132 6145 * * 4179 4907 * 6136 5929 * * 47 92 5001 5038 2924 204 2486 284 6528 2050 4934 E 48 * * 5158 4554 4216 * 4776 4218 4418 4393 * * 6643 5009 2635 3928 2715 3973 * 2270 48 139 4267 4636 1628 564 1524 616 6555 2475 4911 R 49 4937 * 4812 4583 5506 6650 4843 2280 5485 3868 * * 6216 * 2083 4046 4640 3346 4188 5433 49 158 4862 3848 3059 184 933 1070 6639 2026 4569 V 50 4559 6625 4812 4502 4140 4979 4087 3065 2697 5751 5293 4068 4272 5371 3921 6684 3751 3835 * 4407 50 89 4327 6609 3269 158 1333 729 6639 2741 4393 P 51 4437 5273 3019 4540 5638 3675 4435 6053 4193 4359 4972 4662 3694 * 7046 3927 3244 3425 * 3680 51 38 5940 6658 2182 359 2043 401 6682 1709 3591 K 52 5925 * 3246 4418 6328 3833 * 6292 2494 5128 * 3578 2651 4532 4703 3341 4222 4239 * * 52 37 5849 6946 1354 716 1021 980 6752 1524 3484 I 53 5691 6845 2523 2853 7182 4338 6842 5166 3333 4468 6605 2591 3802 4943 4917 4788 5737 4570 * 6436 53 81 5425 4988 3871 102 791 1245 6729 2070 2800 K 54 5623 * 3512 3481 6583 2269 6618 4633 2713 6827 * 3066 4781 3756 4767 5828 4521 4791 * 6811 54 27 5768 * 1620 568 2081 389 6738 1573 2540 V 55 6039 * 4343 2480 5795 2883 5721 4531 4453 4369 * 4392 4516 3339 5052 4394 3973 3878 6391 4832 55 106 3823 * 1466 648 * 0 6744 3159 2284 E 56 2956 * 4761 2161 6650 4795 5503 * 3855 5701 6507 4960 6085 3400 4540 3440 3131 4614 * 6428 56 146 3606 6140 2707 240 440 1928 6744 3505 2284 K 57 4372 * 4848 3255 6537 6742 6619 3994 2196 5259 * 4912 2942 3333 4000 6709 3927 4486 5907 6250 57 131 4169 5007 3122 176 0 * 6733 3175 1629 R 58 5134 6696 * 5161 6392 5621 * 3525 3550 5252 * 3930 6592 5193 1262 5305 4435 3166 * * 58 91 4615 5620 2046 400 * 0 6712 2763 2111 V 59 5530 5860 4912 3451 3748 * 4182 * 3228 5218 4814 4264 3893 3967 3925 3342 3923 4472 5816 4028 59 44 * 5058 * * 2205 353 6688 0 2874 L 60 5807 6510 * * 4707 * 4961 2751 6285 1128 4095 6478 * * 5548 * * 3102 * 3751 60 46 6868 5457 2807 222 1167 850 6721 1000 3407 G 61 * * 3888 3794 * 920 6632 * 4346 * * 3328 3844 5278 * 4011 * * * 5992 61 14 6664 * 3170 170 1357 714 6716 1000 3055 L 62 * * 4692 3470 6815 * 5356 * 3416 1951 3744 4096 * 3581 3825 4096 3307 4695 * * 62 40 5194 * 0 * 360 2179 6744 2114 2251 T 63 4490 4922 * 6594 5520 * 6639 2616 * 2498 3919 * * 6161 * * 4411 1456 * 4361 63 0 * * * * * 0 6761 0 1000 I 64 5956 * * * 1933 * * 2949 * 2289 3004 6460 * * * 4800 4976 2831 * 4516 64 15 6603 * 0 * 0 * 6761 1000 1000 L 65 * 6375 * * * * * 1321 * 2217 5179 * * * * * * 1536 * * 65 22 6016 * 2000 415 * * 6766 1000 0 R 66 * * * * 6580 * * * 4116 * 5832 4863 2767 * 499 5287 * * * * 66 0 * * * * * * 6756 0 0 G 67 * 5128 * * * 220 * * 5914 5904 6339 * * * 6303 4196 * * * * 67 0 * * * * * * 6738 0 0 E 68 6076 6299 2206 2635 * 5091 6300 * 3675 6667 * 2449 5575 * 5457 2488 4070 * * * 68 0 * * * * * * 6732 0 0 Q 69 3899 5156 6721 4030 * 5290 3103 * * * 5636 1722 * 3268 5753 3401 3132 6943 * 5067 69 0 * * * * * * 6732 0 0 I 70 * * * * * * * 1079 * 4642 * * * 6017 * * * 1086 * * 70 37 6581 6056 2322 322 * * 6732 1000 0 L 71 4566 * * 4475 * 5746 * 2931 * 2239 5201 * * * 5532 4343 4158 1332 * * 71 0 * * * * 0 * 6482 0 1000 S 72 4714 4892 4781 4689 3321 * 6255 5819 3958 3136 4111 5574 * * 6175 1964 3382 * 5821 3618 72 34 6513 6352 0 * * * 6306 1000 0 T 73 * 3503 * * 3620 * * 1283 * 4263 2553 * * * * * 6338 2437 * * 73 40 6146 6219 0 * * 0 6307 1000 1000 V 74 4268 * 4147 2885 * * 4402 4143 4070 4423 * * * 4835 * 1693 3045 4029 * 5685 74 72 * 4367 * * 978 1022 6156 0 1314 V 75 2938 5010 * * * 4743 * 2317 * 3090 * * 3991 * 5187 * * 1349 * * 75 0 * * * * 802 1229 5850 0 1760 E 76 * * 2662 1242 * 4737 * * 4373 2997 * 3945 * 3710 * * * 3902 * * 76 0 * * * * 0 * 5640 0 1000 D 77 2402 * 2640 * * 2727 * * * * 3591 4060 2936 4295 4923 2818 * * * * 77 0 * * * * * * 5217 0 0 K 78 2115 * 3930 * * * * * 3455 4066 * * 1255 3647 * * 4210 * * * 78 0 * * * * * * 5051 0 0 P 79 * * * 3376 * * * * * * * * 271 * * * 3743 * * * 79 0 * * * * * * 4618 0 0 L 80 * * * * * * * 1551 * 1288 * * * * * * * 2004 * * 80 0 * * 0 * * * 3781 0 0 //