HHsearch 1.5
NAME  c5fvdB_
FAM   
FILE  c5fvdB_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c5fvdB_.a3m 
DATE  Sat Feb 27 08:14:01 2016
LENG  28 match states, 28 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5180  4.7888 
SEQ
>ss_dssp
CCCCCGGGTSCCSHHHHHHHHHHHHHTC
>sa_dssp
EEEDEEEEEEEEEEECDEEEEDEEEDEE
>ss_pred
CCCCCCCEEEEECCHHHHHHHHHHHHCC
>ss_conf
9887754288862536889999997419
>Consensus
msfpegkdilxmgneaakxaeafqxslx
>c5fvdB_
MSFPEGKDILFMGNEAAKLAEAFQKSLR
>UniRef50_Q2Y2M5(1-28:294) Phosphoprotein n=726 Tax=root RepID=PHOSP_AMPV1   E=2e-06 s/c=1.93 id=83% cov=104%
MSFPEGKDILLMGNEAAKAAEAFQRSLK
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
M 1    *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1104	0	0	

S 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	2
       0	*	*	*	*	*	*	1104	0	0	

F 3    *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1104	0	0	

P 4    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1104	0	0	

E 5    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1104	0	0	

G 6    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1104	0	0	

K 7    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1104	0	0	

D 8    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1104	0	0	

I 9    *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1104	0	0	

L 10   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1104	0	0	

F 11   *	*	*	*	1000	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1104	0	0	

M 12   *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1104	0	0	

G 13   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1104	0	0	

N 14   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1104	0	0	

E 15   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1104	0	0	

A 16   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1104	0	0	

A 17   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1104	0	0	

K 18   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1104	0	0	

L 19   1000	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1104	0	0	

A 20   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1104	0	0	

E 21   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1104	0	0	

A 22   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1104	0	0	

F 23   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1104	0	0	

Q 24   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1104	0	0	

K 25   *	*	*	*	*	*	*	*	1000	*	*	*	*	*	1000	*	*	*	*	*	25
       0	*	*	*	*	*	*	1104	0	0	

S 26   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	26
       0	*	*	*	*	*	*	1104	0	0	

L 27   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1104	0	0	

R 28   *	*	*	*	*	*	*	*	1000	*	*	*	*	*	1000	*	*	*	*	*	28
       0	*	*	0	*	*	*	1104	0	0	

//