HHsearch 1.5 NAME c5fu5A_ FAM FILE c5fu5A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5fu5A_.a3m DATE Sat Jun 25 08:19:13 2016 LENG 117 match states, 117 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4350 -0.2375 SEQ >ss_dssp CCEEEEEEEEHHHHTTCCSSCEEESCEESSSCCEEETTEEECCEEECCTTCEEEEEESSSEEEEEEESSTTCEEEETTEEEECBTTEEEEEECSEEEEEE CSSSCEEEEEEEEEECC >sa_dssp EEDDCEDDBCADEEBDEDECAECDCEDBEEDDDBECEEDEBDCAACBCEEBCACBEADBDBDABABBDCEEBBADBDEEECEBEEBDADCEBEECEBDAC DCDEBBAABACABADEE >ss_pred CCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCEEHHEEEEEECCCEEEEEECCCEEEEEEEECCCCEEEECCCCEECCCCEEEEEECCCCEEEE CCCEEEEEEEEEEECCC >ss_conf 9876427997307876522899974642550468985740330575204524799816870899999557745997361010257379998168742540 35436699987652169 >Consensus xpxxGxxxhnFTxsgtsSsxytixGNxstxKGTvtYnGltltxCLKmEssTxIxFTxxxxxtltLVFaxxxxxxKvdGxkxxxsxgixTvxlxaGxhTIt KxDxxNLFymxxxxxxx >c5fu5A_ GPVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSISFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDLAQGAHTIT KADACNLFYMEYAALEH >UniRef50_C4Z1X1(781-893:1226) Polysaccharide Lyase Family 1-like pectate lyase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z1X1_EUBE2 E=6e-29 s/c=1.13 id=55% cov=91% ------YSYNFTSPETGSDIYKIKGNTSTSKGSVQYAGLTLTTCLKMEGSTSVDFTAPSDGTLTLVF--GANGSAVSGKKVKVnetvytcdSDGIVTVPV KAGSVSITKGDAIFLFYMNYE---- >UniRef50_B7AQA2(4-47:510) Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AQA2_9BACE E=5e-07 s/c=1.26 id=48% cov=34% ------------------------------------------------------------------------AIKVDGREYALDNGILNIEIKAGEHSIT KADPANLFYIE------ >UniRef50_A9KQS3(564-730:1409) Pectate lyase/Amb allergen n=3 Tax=Clostridiales RepID=A9KQS3_CLOPH E=3e-20 s/c=0.45 id=49% cov=99% -PTSEDYSHNFTTQRLTSSFYSFPGlaNLANNKGTVTYNGMNLTDCLKMETGTQIVFTSPADGIYTMVFnpSTGKVNAKVNGAKYTGDDqtGILTIPVLA GtKYTIDKADTANLFYMS-LSLDD >UniRef50_B7ANX7(753-951:1190) Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANX7_9BACE E=4e-41 s/c=0.79 id=55% cov=101% EPAEaGAYAHNFTTSGTSSSVYTITGSTTTSKGSVTYAGLTLTTALKMESKTGITFTAPSDGKLVLVFggstAASGKTVKVNGDRYTCgSDGIATVEVKA GEVTITKGDSINLFYMNFEADGS >UniRef50_UPI0001788A45(560-683:683) Pectate lyase/Amb allergen n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A45 E=1e-38 s/c=1.24 id=54% cov=97% EPSTGEQVHNFTTSGLASDFFHIVGNLSTTKGTAVYNGLTLTQCLKIESSTRITFTSTETATLTLVFNSADGTkIKIDGTSYPMTNGMVSVPLAPGAHTI TKDHTTNLFYMELE---- >UniRef50_A5FKK5(619-852:919) Candidate pectin or pectate lyase n=2 Tax=Flavobacteriaceae RepID=A5FKK5_FLAJ1 E=1e-36 s/c=0.67 id=63% cov=98% GNPAGDEIHNFTTSGKTSDFYTITGNLSTTKGTVTYNGLTLTQCLKIESATSITFTTTQASTLTLVFVEAAGTIKVDNVDKTASNGIVTVSLAAGNHTIA KKDTSNLFYM---VTAY >UniRef50_D1PCG0(649-765:774) Pectate lyase related protein, secreted n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCG0_9BACT E=4e-30 s/c=1.20 id=47% cov=93% TPIEGTVLVTFTDSKPSSSIVTVSGNYATNKGTATIDGTSYSTCVKMESATNISVTVDKKVTMTLYFssADTKTNAKIDGKKPAEVNAVIdstaktmTVT LDAGSHTITKQDTCNLF--------- >UniRef50_C5RP24(37-147:463) Pectate lyase/Amb allergen n=2 Tax=Clostridium RepID=C5RP24_CLOCL E=2e-27 s/c=1.30 id=50% cov=94% --------HNFTTSGTSSSIFTIVGNLSTDKGTVTYNGLTLTKCLKIESSTSIKFTTTGTSTLKLVFNDVdGKRIKVDGKDYSMTSKLVSLSLAAGAHTV SKTDVTNLFYIELTTDGS >UniRef50_D1PT83(609-721:725) Putative uncharacterized protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PT83_9BACT E=6e-23 s/c=1.25 id=54% cov=95% TPVEGAVVCSFDKAGTpSSSLFTVMGNGSNSKGTATYNGKTYNTCLKMESSTNISFTTTKTMKLTLVFADTeTASFKFDGKKTVGTGSTYTFDsLPAGEH TITKQDIRNLFLI------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * 2073 * 1586 * * * * * * 2949 * * * 1738 * * * 1 0 * * * * * * 2291 0 0 P 2 * * * * * * * * * * * 3316 547 * * * 2218 * * * 2 0 * * * * * * 2407 0 0 V 3 3415 * * * * * * 2811 * * * * 2230 * * 3128 2121 2277 * * 3 0 * * * * * * 2407 0 0 A 4 2444 * * 1477 * 3149 * * * * * * * * * 2970 2207 * * * 4 142 3415 * 0 * * * 2407 1000 0 G 5 * * * 2970 * 197 * * * * * * * * * * * * * * 5 0 * * * * * * 2407 0 0 N 6 2205 * 2132 3128 * * * * * * * 3586 * * * 3291 1970 * * * 6 0 * * * * * * 2407 0 0 Y 7 * * * 3416 * * * * * * * * * 3218 * * * 1966 * 881 7 0 * * * * * * 2414 0 0 V 8 3562 * * * * * * 3416 * 2900 * * * * * 1808 * 1314 * * 8 0 * * * * * * 2414 0 0 H 9 * 3147 * * * * 735 * * * * * * * * * * 2954 * 2670 9 0 * * * * * * 2415 0 0 D 10 * * 3866 * * * * * * * * 536 * * * 3147 2954 * * * 10 0 * * * * * * 2415 0 0 F 11 * * * * 0 * * * * * * * * * * * * * * * 11 0 * * * * * * 2415 0 0 T 12 * * 3147 * * * * * * * * * * * * * 173 * * * 12 0 * * * * * * 2415 0 0 A 13 2691 * 2954 * * * * * 3147 * * * * * * 2670 1165 * * * 13 0 * * * * * * 2415 0 0 N 14 3147 * * * * * * * * * * 3866 2670 3188 * 858 * * * * 14 0 * * * * * * 2415 0 0 G 15 * * * 2670 * 727 * * 2954 * * * * * 3188 * * * * * 15 0 * * * * * * 2415 0 0 T 16 * * * * * * * * 3647 2315 * * 2954 * * * 761 * * * 16 173 3147 * 0 * * * 2415 1000 0 S 17 3455 * * * * 2670 * * * * * * * * * 1071 1858 * * * 17 0 * * * * * * 2415 0 0 S 18 * * * * * * * * * * * * * * * 0 * * * * 18 0 * * * * * * 2415 0 0 S 19 * * 1608 * * * * * * * * * * * * 574 * * * * 19 0 * * * * * * 2415 0 0 F 20 * * * * 1517 * * 1421 * 3147 * * * * * * * 2604 * * 20 0 * * * * * * 2415 0 0 Y 21 * * * * 1780 * * * * * * * * * * * * 2954 * 787 21 0 * * * * * * 2415 0 0 T 22 * * * * * * 3455 * 2670 * * * * * * 3188 640 * * * 22 0 * * * * * * 2415 0 0 I 23 * * * * 3188 * * 625 * * * * * * * * * 2048 * * 23 0 * * * * * * 2415 0 0 A 24 3866 * * * * * * * 2670 * 3147 * 3188 * * 2954 2034 2487 * * 24 0 * * * * * * 2415 0 0 G 25 * * * * * 0 * * * * * * * * * * * * * * 25 168 3188 * 1000 1000 * * 2415 1000 0 N 26 * * * * * * * * * * * 259 * * * 2604 * * * * 26 0 * * * * * * 2415 0 0 L 27 * * * * * 3147 * * * 936 * * * * * * 2087 * * 2954 27 0 * * * * * * 2415 0 0 S 28 1621 * * * * * * * * * * * * * * 745 3678 * * * 28 130 * 3535 * * * * 2415 0 0 T 29 * * * * * * * * * * * 2060 * * * * 395 * * * 29 0 * * * * 0 * 2387 0 1000 S 30 * * 3520 * * * * * * * * 1621 * * * 1263 2548 * * * 30 0 * * * * * * 2415 0 0 K 31 * * * * * * * * 0 * * * * * * * * * * * 31 0 * * * * * * 2415 0 0 G 32 * * * * * 0 * * * * * * * * * * * * * * 32 0 * * * * * * 2415 0 0 T 33 * * * * * * * * * * * * * * * 2087 387 * * * 33 0 * * * * * * 2415 0 0 A 34 1316 * * * * * * * * * * * * * * * * 741 * * 34 0 * * * * * * 2415 0 0 T 35 * * * * * * * * * * * 3535 * 2670 * * 588 3455 * * 35 0 * * * * * * 2415 0 0 Y 36 * * * * * * * 2954 * * * * * * * * * * * 199 36 0 * * * * * * 2415 0 0 N 37 1637 * 2954 * * * * * * * * 864 * * * * * * * * 37 0 * * * * * * 2415 0 0 G 38 * * * * * 0 * * * * * * * * * * * * * * 38 0 * * * * * * 2415 0 0 K 39 * * * * * * * * 2462 786 3188 * * * * * 2954 * * * 39 0 * * * * * * 2415 0 0 T 40 * * * * * * * * * * * 3188 * * * 2954 394 * * * 40 0 * * * * * * 2415 0 0 L 41 * * * * * * * * * 400 * * * * * * * * * 2048 41 0 * * * * * * 2415 0 0 T 42 * * * * * * * * * * * 3147 * * * 2216 574 * * * 42 0 * * * * * * 2415 0 0 Q 43 * * 3188 * * * * * 2527 * * * * 2061 * * 1067 * * * 43 0 * * * * * * 2415 0 0 C 44 3678 117 * * * * * * * * * * * * * * * * * * 44 0 * * * * * * 2415 0 0 L 45 * * * * * * * * * 199 * * * * * * * 2954 * * 45 0 * * * * * * 2415 0 0 K 46 * * * * * * * * 0 * * * * * * * * * * * 46 0 * * * * * * 2415 0 0 M 47 * * * * * * * 1953 * * 431 * * * * * * * * * 47 0 * * * * * * 2415 0 0 E 48 * * * 0 * * * * * * * * * * * * * * * * 48 0 * * * * * * 2415 0 0 T 49 * * * * * 2670 * * * * * * * * * 590 2487 * * * 49 0 * * * * * * 2415 0 0 A 50 1850 * * * * 3188 * * 3678 * * * * * * 903 * * * * 50 0 * * * * * * 2415 0 0 T 51 * * * * * * * * * * * * * * * * 0 * * * 51 0 * * * * * * 2415 0 0 S 52 * * * * * 3678 * * * * * 2048 * 3188 3455 1062 * * * * 52 0 * * * * * * 2415 0 0 I 53 * * * * * * * 247 * * * * * * * * * 2670 * * 53 0 * * * * * * 2415 0 0 S 54 * * 2670 * * * * * 2527 * * * * * * 1687 2005 3188 * * 54 0 * * * * * * 2415 0 0 F 55 * * * * 199 * * * * * * * * * * * * 2954 * * 55 0 * * * * * * 2415 0 0 T 56 3535 * * * * * * * * * * * * * * * 130 * * * 56 0 * * * * * * 2415 0 0 A 57 1718 * * * * * * * * * * * * * * 2315 1450 2954 * * 57 0 * * * * * * 2415 0 0 P 58 * * 2954 * * * * * * * * * 1000 * * * 1430 * * * 58 0 * * * * * * 2415 0 0 S 59 3188 * * 3455 * 3520 * * 2048 * * * * 3647 * 1358 * * * * 59 0 * * * * * * 2415 0 0 A 60 2752 * 1535 * * * * * 2954 * * * * * * 3535 1780 * * * 60 0 * * * * * * 2415 0 0 G 61 3455 * * * * 1000 * * * * 3147 * * * * 2582 * 2954 * * 61 0 * * * * * * 2415 0 0 K 62 * * * * * * * 3188 1531 * * * * * * * 877 * * * 62 0 * * * * * * 2415 0 0 L 63 * * * * * * * * * 394 2954 * * * * * * * * 3188 63 0 * * * * * * 2415 0 0 T 64 * * * * * * * 3535 3520 * * * * * * * 418 3678 * * 64 0 * * * * * * 2415 0 0 L 65 * * * * * * * * * 168 3188 * * * * * * * * * 65 0 * * * * * * 2415 0 0 V 66 * * * * * * * * * * * * * * * * * 199 * 2954 66 0 * * * * * * 2415 0 0 F 67 * * * * 0 * * * * * * * * * * * * * * * 67 1185 1063 3614 1660 549 * * 2415 2048 0 A 68 718 * * * * * * * * * * 2435 * * * 3064 * 3516 * * 68 0 * * * * * 0 2428 0 1000 E 69 2481 * 1576 2611 * * * * * * * * * * * 3366 3064 3249 * * 69 0 * * * * 0 * 2428 0 1000 A 70 2061 * * * * 2386 * * * * * * * * * 2059 2048 3520 * * 70 322 2322 * 0 * * * 2415 1391 0 A 71 2120 * 3455 * * 1612 * * 2066 * * * * * * * 3147 * * * 71 0 * * * * * * 2415 0 0 A 72 2462 * * * * 2548 * * 1612 * * 3614 * * * * 2954 3188 * * 72 0 * * * * * * 2415 0 0 T 73 3139 * * * * 3644 * * 3766 * * 2109 * * 3538 3169 1718 * * * 73 132 3513 * 0 * * * 2409 1000 0 A 74 1742 * * * 3169 * * 1839 * * * * * * * 3644 * 2118 * * 74 0 * * * * * * 2409 0 0 K 75 3644 * * * * * * * 120 * * * * * * * * * * * 75 0 * * * * * * 2409 0 0 V 76 * * * * 3169 * * 2226 * * * * * * * * * 567 * * 76 0 * * * * * * 2409 0 0 D 77 * * 776 * * * * * * * * 1573 * * * 3644 * * * * 77 0 * * * * * * 2409 0 0 G 78 * * * 3766 * 232 * * * * * 3735 * * * * * * * * 78 0 * * * * * * 2409 0 0 N 79 3242 * 3754 * * * * * 1310 * * 3897 * * 5020 * 2036 3735 * * 79 0 * * * * * * 2409 0 0 K 80 * * 2633 5020 * * * * 804 * * * * * 3754 3513 * 3766 * * 80 0 * * * * * * 2409 0 0 V 81 * * * * * * * * 3735 * * * 2987 * * * 3169 2765 * 888 81 0 * * * * * * 2409 0 0 T 82 2672 * * * * * * * 3644 * * * 3513 * * 3538 1064 3169 * * 82 0 * * * * * * 2409 0 0 A 83 2814 2118 * 2987 * 2205 * * * 5020 2526 * * * * * * 3644 * * 83 536 1688 * 1458 653 * * 2409 1467 0 S 84 * * 2873 * * * * * * * * * * * * 1144 1812 2987 * * 84 0 * * * * * * 2409 0 0 N 85 * * 1265 * * 3169 * * * * * 1370 * * * 3538 * * * * 85 161 3242 * 1000 1000 * * 2409 1000 0 G 86 2987 * * * * 564 * * 3538 * * * * * * 3169 * * * * 86 0 * * * * * * 2409 0 0 I 87 * * * * * * * 764 * 3538 3513 * * * * * 3169 2987 * * 87 0 * * * * * * 2409 0 0 I 88 2673 * * * * * * 2371 * 2873 * * * * * * * 1314 * 3169 88 194 2987 * 2807 222 * * 2409 1000 0 T 89 * * * * * * * * * * * 5020 * * * 2526 330 * * * 89 0 * * * * * * 2409 0 0 V 90 * * * * 3169 * * 2190 * 3538 * * * * * * * 777 * * 90 0 * * * * * * 2409 0 0 D 91 * * 1938 3252 * * * * * * * * 1528 * * 2633 2987 * * * 91 170 3169 * 0 * * * 2409 1000 0 L 92 * * * * * * * 3139 * 854 * * * * * * * 1585 * * 92 0 * * * * * * 2409 0 0 A 93 1662 * 2987 * * * * * 1952 3242 * * 3169 * * 3596 * * * * 93 0 * * * * * * 2409 0 0 Q 94 391 * * * * 3596 * * * * * * 3513 3897 * * * * * * 94 0 * * * * * * 2409 0 0 G 95 * * * * * 124 * * * * * * * * * 3596 * * * * 95 161 3242 * 0 * * * 2409 1000 0 A 96 2054 * * 2210 * * * * 2408 * * 3735 * * * 1839 * * * * 96 0 * * * * * * 2409 0 0 H 97 * * 3596 * * * 776 * * * * * * * * * * 2136 * 3242 97 124 3596 * 0 * * * 2409 1000 0 T 98 * * * * * * * * * * * * * * * 2440 294 * * * 98 0 * * * * * * 2409 0 0 I 99 * * * * * * * 130 * * * * * * * * * 3538 * * 99 0 * * * * * * 2409 0 0 T 100 3735 * 3242 * * * * * * * * * * * * 3538 448 * * * 100 0 * * * * * * 2409 0 0 K 101 * * * * * * * * 0 * * * * * * * * * * * 101 0 * * * * * * 2409 0 0 A 102 2296 * 3513 * * 1688 * * 3735 * * * * 2075 * * 3538 * * * 102 0 * * * * * * 2409 0 0 D 103 * * 132 * * * 3513 * * * * * * * * * * * * * 103 0 * * * * * * 2409 0 0 A 104 2181 * * * * * * 3169 * * * * 5020 * * 2673 1342 3538 * * 104 0 * * * * * * 2409 0 0 C 105 2873 2371 * * * * * 1688 * * * * * * 3169 3735 2526 * * * 105 0 * * * * * * 2409 0 0 N 106 * * * * 2704 * * * * * * 240 * * * * * * * * 106 0 * * * * * * 2409 0 0 L 107 * * * * * * * * * 0 * * * * * * * * * * 107 0 * * * * * * 2409 0 0 F 108 * * * * 0 * * * * * * * * * * * * * * * 108 0 * * * * * * 2409 0 0 Y 109 * * * * * * * * * 2913 * * * * * * * * * 206 109 0 * * * * * * 2263 0 0 M 110 * * * * * * * 1486 * * 637 * * * * * * * * * 110 148 * 3358 * * * * 2263 0 0 E 111 * * * 1021 * * * * * * * 1336 * * * 3167 * * * * 111 193 * 2998 * * * 0 2398 0 1000 Y 112 * * * * 2956 * * * * 1629 * * * * * * * * * 868 112 0 * * * * 975 1025 1930 0 1444 A 113 3068 * * 1111 * * * * * 2666 * * * * * * 2851 3041 * * 113 0 * * * * 0 * 2090 0 1000 A 114 1679 * * * * * * * * * * * * * * 2344 1567 2707 * * 114 0 * * * * * * 1989 0 0 L 115 * * 1569 2670 * * * * * 1504 * * * * * * 2707 * * * 115 0 * * * * * * 1989 0 0 E 116 2707 * 2344 2684 * 1017 * * * * * * * * * * * * * * 116 0 * * * * * * 1989 0 0 H 117 * * 2344 * * * 2684 * * * * * * * * 1017 * * * 2707 117 0 * * 0 * * * 1989 0 0 //