HHsearch 1.5 NAME c5fd3A_ FAM FILE c5fd3A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5fd3A_.a3m DATE Thu Feb 9 14:00:38 2017 LENG 108 match states, 108 columns in multiple alignment FILT 128 out of 209 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.5178 1.2629 SEQ >ss_dssp CCCCCCSSSTTCSTTSHHHHTTCCCCSCCCSSCCSSGGGHHHHHHHHHHHHHHCTTTTSCCCCCCCSSSTTCSTTSHHHHTTCCCCTTCCCSSCCCSTTC HHHHHHHC >sa_dssp DEDBECEECDABDDEAEBACEEDDBEECECDECDACEECCEDBEECCEDADEEDEECDEEEEDBECEEBBACEEEAEBCEEDEDCDEDBECEECDBDDEA EDBDEDEE >ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC HHHHHHHC >ss_conf 9988688862034320686418877888644444686568999999999973184653255563337562224545587415987876453788578988 67887509 >Consensus xkxCnCkkSxClKlYCxCFxxgxxCxxCxCxxCxNxxxxxxxrxxaxxxxxxrnpxafxxxxGCxCxksxCxkxyCxCxxxgxxCxxxCxCxxCxNxxxx xxxxxlxx >c5fd3A_ RKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEES PERKTLMH >UniRef50_A0DLC6(145-258:263) Chromosome undetermined scaffold_55, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DLC6_PARTE E=2e-16 s/c=0.76 id=38% cov=97% -KPCHCSKTKCLQLYCSCFHKNKACSSkCQCKGCFNDGNHKVEMVKALQKVKLKeyrvsqsDLDSFDTRQvlGCKCKKTHCKKGYCECFIRGRKCTSQCK CCECNNQRQKSQVKK--- >UniRef50_A0DIF1(96-195:244) Chromosome undetermined scaffold_51, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DIF1_PARTE E=7e-12 s/c=0.72 id=36% cov=89% --KCQCSKSQCQQSYCECFARGKTCGKhCGCQNCQNMQMNKKLGKIQKRLVKQKRIKQRTPRylKGCTCGKSKCQNNFCSCHQDGKYCNSECKCVDCKNV ----------- >UniRef50_A7SPH6(1301-1348:1373) Predicted protein n=3 Tax=Nematostella vectensis RepID=A7SPH6_NEMVE E=9e-05 s/c=1.00 id=30% cov=40% ------------------------------------------------------PDAVLHLVKCGCLTERCSTNRWQCRKAGLPCTDLCGCADdeegepC QN------------ >UniRef50_C3ZD39(307-407:1039) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZD39_BRAFL E=5e-07 s/c=0.55 id=25% cov=84% ---CTCGavNSKdtgdrCGSRRCPCYRQYRMCSpKCYCKHCINNvPLTKADREQGKGCSCGKNDKKRVTESSVeRC----VMSLRCACFIANRPCGRSCA CFHCGNK----------- >UniRef50_Q6P9P4(1100-1138:1248) Zgc:66125 n=6 Tax=Clupeocephala RepID=Q6P9P4_DANRE E=0.0009 s/c=1.15 id=39% cov=33% --------------------------------------------------------------GCAC-RGRCVNKLCRCRKGKMTCGENCLCDHekCRNME ---------- >UniRef50_Q23WV0(247-370:379) Tesmin/TSO1-like CXC domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23WV0_TETTH E=3e-11 s/c=0.56 id=36% cov=87% ---CNCQTTQCIKKYCSCYANNNFCVPsiCKCQSCMNTFQQSYNSTSQKKPKLISSQKSLSQvilyqiqninqlkiqkenaTISCTCQKSFCKKQYCDCY KSGKKCSTLCKCQNCFN------------ >UniRef50_A7S029(785-884:1013) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S029_NEMVE E=5e-09 s/c=0.62 id=28% cov=83% RKKCNCGKNAgsnspvCavgELSHCPCAKAGLKCLPfCRCSKlLCSNKAQAEDVSCSCG-ITSGSKKDF-----VACSKTA-TRGRCPCIKAGFPCTSKC ACGSCGN------------ >UniRef50_B4ND90(1047-1115:1198) GK10187 n=3 Tax=Drosophila RepID=B4ND90_DROWI E=0.0001 s/c=0.69 id=38% cov=34% ---------------------------------------------------------------CKC-RIRCDSKRCLCYVNGSSCLPSCRCKGsCHNPSN S-------- >UniRef50_D0NE84(637-705:895) Polycomb-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NE84_PHYIN E=8e-09 s/c=0.89 id=29% cov=64% --PCHHDGGSCDSAQCSCMRRDHYCEKsCGCSLDCSN-----------------------RFPGCHCEVGQCRTSECPCYFAARECDPD-VCTSC----- --------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 1319 * * * * 1988 1526 * * * * * 1 0 * * * * * * 3520 0 0 K 2 6302 * * 3576 * * * * 742 * * 5705 5181 2857 3281 * 5796 * * * 2 0 * * * * * * 4221 0 0 P 3 * 5760 * * * 2568 3114 * 2520 * * * 1370 4509 4667 5106 5393 * * * 3 0 * * * * * * 5041 0 0 C 4 * 0 * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 4913 0 0 N 5 5833 7042 5910 5941 6692 4933 3269 5758 3101 * * 1285 * 5047 4377 3392 3703 * * * 5 29 * 5664 * * * * 4913 0 0 C 6 * 53 * * * * 4793 * * * * * * * * * * * * * 6 83 * 4158 * * 0 * 4875 0 1000 T 7 5998 * 4690 6119 * 3455 5605 6492 1098 5865 * 6925 6358 4275 4075 3908 3561 4604 * * 7 77 5643 4975 1000 1000 0 * 4847 1000 1498 K 8 * * 5599 * * 4771 6871 * 906 * * 2651 5567 4477 3043 5615 5430 * * 6592 8 0 * * * * 0 * 4877 0 1249 S 9 6439 * * * * 3318 * 5336 * * * 4470 * * 5678 801 2153 * * * 9 0 * * * * * * 4913 0 0 L 10 3356 * * 6405 6849 3501 4631 * 1554 6127 5217 4298 * 2418 4253 3629 * * * * 10 94 3984 * 2494 282 * * 4913 1676 0 C 11 * 0 * * * * * * * * * * * * * * * * * * 11 30 5607 * 1585 585 * * 4913 1000 0 L 12 5388 * 4309 4684 * 4080 * 3086 5927 841 7151 * * 5164 4583 5688 6322 5237 * * 12 35 5388 * 1585 585 * * 4920 1000 0 K 13 4502 * * * * * * * 520 3980 * * * 3694 * 3086 * * * * 13 25 * 5878 * * * * 4920 0 0 L 14 3786 * * 5236 5763 * * * 3646 1045 3889 4226 * 6166 3560 3800 6263 * * 6186 14 39 * 5236 * * 0 * 4913 0 1265 Y 15 * * 6321 * * * 4051 * 5692 * * * * 2926 5825 * 4426 * * 490 15 0 * * * * 0 * 4897 0 1064 C 16 * 81 * 4202 * * * * * * * * * * * * * * * * 16 0 * * * * * * 5371 0 0 D 17 3557 * 2595 2092 5773 * 6990 * * * 6118 * 2639 3975 3985 2969 5246 4921 * * 17 0 * * * * * * 5371 0 0 C 18 * 102 * * * 6185 * 4202 * * * * * * * * * * * * 18 0 * * * * * * 5371 0 0 F 19 3931 * * * 659 * * 6285 * 3846 4454 6185 * * * 5965 4202 * * 3486 19 24 5921 * 0 * * * 5371 1000 0 A 20 1704 * * 6687 * 6777 2541 * 3295 4893 * 7273 * 3033 3582 3772 5203 4202 * * 20 0 * * * * * * 5371 0 0 N 21 2107 * 5732 4858 6755 5582 5431 * 3975 * * 2679 * 3538 2778 2747 * 4433 * 6127 21 20 * 6185 * * * * 5371 0 0 G 22 6887 * 4648 5385 * 887 * * 4427 6064 4925 3012 * 6929 4891 3327 * * * 5206 22 0 * * * * * 0 4919 0 1000 E 23 5158 * * 4319 * 3845 4648 3794 3073 4025 6469 2889 * 3849 2566 4851 4242 3991 * 5315 23 0 * * * * * 0 4919 0 1000 F 24 5200 3946 * 4279 2600 3814 6713 5462 4306 4168 3325 5739 5507 5159 5982 4805 4677 4508 * 2484 24 0 * * * * * 0 4919 0 1000 C 25 * 99 * * * * * 3919 * * * * * * * * * * * * 25 294 2437 * 72 4356 * 0 4919 3337 1000 N 26 * * 3055 2396 * 3081 5660 6615 4801 4483 * 4190 5663 3351 6725 2351 4259 5027 * * 26 253 2635 * 110 3770 * 0 4919 2845 1000 N 27 * * 3660 2881 * 3129 5950 6453 1924 * * 2720 3140 6438 5934 3721 6521 * * * 27 869 1144 * 212 2871 * 0 4919 4181 1000 C 28 * 141 6071 * * * * * * * * * 3919 * * * 6359 * * * 28 0 * * * * * 0 4919 0 1000 N 29 5731 * 6101 4398 * 3298 6086 7337 2407 6820 * 2463 * 3755 3269 2578 4948 5452 * 5853 29 0 * * * * * 0 4919 0 1000 C 30 * 137 * * * * * * 3464 * * * * * * * * * * * 30 31 5558 * 0 * * 0 4919 1340 1000 T 31 * 5572 5314 3881 4575 6247 6135 4512 3932 2651 6849 5932 6272 2696 5250 3087 3206 3523 * 5931 31 33 6681 6247 0 * * 0 5363 1000 1000 N 32 4456 * 2261 3316 * 2447 5653 * 3052 4277 * 2794 5679 5064 5986 4044 * * * * 32 72 5392 5343 0 * * 0 5338 1000 1429 C 33 * 270 4587 * * 5680 * 4145 * 4711 * * * * * 6092 * * * * 33 0 * * * * 1036 965 5345 0 1662 Y 34 5364 2520 * 3510 3802 5306 3874 5604 2314 4998 4790 6264 * 3875 4518 3648 * * * 4193 34 13 * 6844 * * * 0 5328 0 1711 N 35 * * * * * * * * 5590 5664 * 141 * * * 4247 * * * * 35 37 6683 6010 3322 152 * 0 5326 1000 1823 N 36 * 4379 4551 * * 3987 * 5602 2620 5812 5487 1719 * * 3979 3770 2529 6772 * * 36 157 4951 3824 0 * * 0 4972 1000 2015 L 37 4695 * 3638 2895 4071 4534 6491 4674 3113 5508 * 6115 3333 4294 5351 2839 4028 3923 * * 37 38 * 5250 * * 1664 547 5298 0 2144 E 38 3393 6180 3818 1706 * 5615 * 5681 5603 3875 5410 2871 5889 3330 * 4530 5319 5943 * 5382 38 0 * * * * 1863 464 4803 0 2291 H 39 3476 6466 4871 5519 3267 7116 2538 * 4583 * * 2489 * 3563 * 4743 4015 * 6874 2763 39 63 4556 * 1585 585 * 0 4391 1498 2330 E 40 4274 6802 6874 1919 * 5506 5958 6659 2819 2840 4120 3857 5620 3735 5960 3466 6866 * * * 40 19 6244 * 1585 585 * 0 4391 1000 2330 N 41 3538 * 3046 2108 5788 3796 * 5900 3836 6766 5446 3215 4464 4854 * 4343 4291 4922 * 5016 41 48 4925 * 2420 298 * 0 4391 1567 2330 E 42 3335 * 3749 1634 6975 * * 4507 4526 3331 7082 5932 5110 3751 * 5071 4922 3181 6700 * 42 10 7172 * 1585 585 * 0 4391 1000 2330 R 43 * * * * * 4854 * 4413 6186 5140 5535 * * 5937 598 3779 * 3250 * * 43 0 * * * * * 0 4391 0 2330 Q 44 4988 5357 * 2520 * * 5971 5121 2677 4929 5446 3196 * 2655 6985 3862 3311 3889 * * 44 17 6442 * 3907 100 * 0 4391 1000 2330 K 45 4255 5043 3707 2743 * 6567 6144 5274 2621 4262 6030 4019 * 2588 4710 3964 4363 5971 5962 * 45 36 5356 * 0 * * 0 4434 1000 2330 A 46 906 * 4249 * 6752 4098 * 3936 5962 * * * * 3679 6984 3689 4485 4148 * * 46 52 5551 6159 2001 415 * 0 4434 1503 2330 I 47 4596 5034 * * 6149 * * 1397 3375 3399 4034 * * * 3327 4510 5057 3202 * * 47 0 * * * * * 0 4418 0 2324 K 48 5109 * 4542 2263 6643 3238 * 5112 2157 * * 4597 * 3366 3940 4690 4861 3754 * * 48 45 * 5034 * * 2761 230 4418 0 2324 A 49 2837 4869 4580 3666 * 5027 3974 * 2989 4065 5497 5184 5878 3076 * 3206 4976 3747 * 5299 49 0 * * * * 1647 555 4407 0 2450 C 50 4793 5863 6039 * 5931 5427 6354 1727 4753 4851 5726 * 3652 4326 7222 4643 3476 2272 * 6162 50 14 6701 * 2585 263 * 0 4485 1000 2069 L 51 4339 5039 6626 3567 6339 * * 4248 2934 1348 5747 4110 * 4462 5059 5427 4544 5726 * * 51 78 5234 5246 1971 425 * 0 4485 1561 2069 D 52 3947 * 4593 2499 * 4655 5109 3733 3803 4314 4923 4364 * 2930 * 2336 5676 5593 * * 52 83 * 4161 * * * 0 4458 0 2755 R 53 * * * 6165 * 4989 6612 * 1320 6002 * 6039 * 4961 1110 5846 * * * * 53 118 4028 5834 3145 173 * 0 4461 2157 3181 N 54 6268 4295 3412 5436 * * 6505 6514 5353 * * 815 * 6569 3414 3772 * * * 5239 54 26 * 5817 * * 2991 194 4439 0 3330 P 55 4560 * 3684 * 5220 * 6309 4495 3831 4659 * 5882 911 4422 * 4824 6451 6204 * 5032 55 0 * * * * 3290 156 4465 0 3193 E 56 4846 * 2408 4545 5114 6693 4588 * 2508 3745 6244 2905 5361 6821 3001 4476 6713 4782 * 6975 56 0 * * * * 2664 248 4469 0 3146 A 57 722 5494 4010 5807 * * * 5676 4424 3805 * 4565 * 4489 5789 5176 * 5539 * * 57 83 5493 4877 2659 249 2623 255 4527 1440 2877 F 58 * * * * 611 * 5483 5990 5413 3628 * * 4271 * 3677 4642 * 4934 * * 58 302 2911 4158 4163 83 3539 130 4493 2789 3082 K 59 3870 * 3281 5524 6543 5436 6453 * 1660 4593 * 3682 5609 3600 3502 3867 4932 4899 * * 59 103 4361 5609 4264 77 1985 420 4436 1949 3316 P 60 * * 4904 3764 * 5659 2840 4129 4538 4331 * * 2026 4143 3104 4232 3551 5225 * * 60 200 2950 * 4546 63 2076 391 4527 2596 3103 K 61 * 6145 4342 4248 2835 * 5418 6624 1661 5656 6124 4187 5130 4158 3393 5010 4222 4624 * * 61 274 2532 * 3785 109 1930 439 4550 3001 2737 K 62 5879 * 5188 5906 * 4817 * 4500 1374 4949 * * 4771 5315 3108 3781 5127 3316 4642 5545 62 318 2439 6235 3317 153 695 1387 4829 3360 2405 G 63 5361 * * * * 341 * 4343 3926 * * * * * * 3820 * * * * 63 0 * * * * 469 1848 4354 0 1823 C 64 * 142 * * * * * * * * * * * * 4389 * * 4440 * * 64 39 5235 * 0 * * 0 4279 1000 1000 N 65 3210 6216 * * 6450 4875 3368 * 2554 * * 1711 * 7066 4272 3177 3462 * * * 65 0 * * * * 0 * 4285 0 1000 C 66 * 70 * * * * * * * 4394 * * * * * * * * * * 66 153 6534 3475 1585 585 * * 4286 1000 0 K 67 3933 * 4228 5720 * 5343 * 6109 1388 4794 * 6527 5690 4314 2945 2938 4337 6097 * * 67 37 * 5295 * * 265 2577 4131 0 2627 R 68 6813 * * * * * * 6920 804 6183 * 5345 5799 * 2231 3703 4441 5813 * * 68 0 * * * * 574 1608 4226 0 1954 S 69 3523 * 6618 4877 * 3092 * 6188 * 6380 * 4384 * 5904 * 1083 2403 * * * 69 98 6628 4172 2000 415 * 0 4238 1000 1000 G 70 3863 * 6886 4642 4997 3067 4470 * 2401 6523 5243 3728 * 3291 3152 3274 4118 * * 6746 70 47 * 4952 * * 0 * 4152 0 2188 C 71 * 120 * 4402 * * * * * * * * * * * * * 4952 * * 71 70 * 4400 * * 0 * 4273 0 1250 L 72 6135 * 5295 4686 * 5670 * 4567 3585 1987 4117 5787 * 3651 3123 3487 3698 3512 * * 72 11 7046 * 2585 263 * 0 4198 1000 1000 K 73 5539 * * * * * * 6180 939 4524 * 4063 * 5787 4497 3627 2348 * * * 73 0 * * * * * 0 4198 0 1000 N 74 * * * * * 3633 * * 1345 3234 * 2556 5009 5353 2919 4674 5469 * * * 74 0 * * * * * 0 4198 0 1000 Y 75 4928 * * 5814 6394 * * 6135 4970 5486 * * * 5019 2305 5009 6545 6073 * 788 75 0 * * * * * 0 4198 0 1000 C 76 * 50 * * * * * * * * * * * * * * * * 4862 * 76 0 * * * * * 0 4198 0 1000 E 77 4507 * 3543 1281 * 5577 * 6073 6135 5017 * * 2818 3851 6282 3908 3932 5532 * * 77 0 * * * * * 0 4198 0 1000 C 78 * 0 * * * * * * * * * * * * * * * * * * 78 0 * * * * 0 * 4198 0 1000 Y 79 * * * * 1168 * 4825 4834 4938 3919 * 6390 * 6707 3605 * * 6458 * 1886 79 0 * * * * * * 4296 0 0 E 80 2865 * * 6090 5850 3495 6092 3303 2128 3854 6851 4586 * 2392 5986 4686 6874 5369 * * 80 0 * * * * * * 4296 0 0 A 81 1276 * 5373 * 6700 4636 4727 6808 5222 5141 6329 3001 * 7129 3063 3398 7257 4447 * * 81 0 * * * * * * 4405 0 0 K 82 4343 * 5423 * * 703 6795 * 3867 6078 5741 2714 * 6809 * 5184 * * * 6237 82 0 * * * * * * 4405 0 0 I 83 4312 * * 5633 5278 5342 * 3853 3191 2600 4728 4794 * 4359 2602 5537 5507 2416 5849 * 83 0 * * * * * * 4405 0 0 M 84 4497 * * 3103 5540 3584 * 4890 2167 5038 5065 4462 3073 4856 4704 3674 5144 5249 * 4386 84 0 * * * * * * 4405 0 0 C 85 * 0 * * * * * * * * * * * * * * * * * * 85 0 * * * * * * 4405 0 0 S 86 5985 * 3505 * * 2687 6511 * * 5494 * 3969 * 5700 6366 1995 1512 6483 * * 86 46 5486 6777 0 * * * 4173 1397 0 S 87 5688 * 2163 2613 6956 6211 5451 5989 5445 5556 6931 4597 2870 6232 5278 2390 5369 5276 * 5418 87 57 5182 6441 1561 597 0 * 4167 1382 1000 I 88 4330 * 3506 5373 5777 6863 4836 5091 3417 2259 4306 2661 * 4579 5078 3528 5820 * * 4062 88 132 5562 3913 0 * 0 * 4171 1489 1000 C 89 * 0 * * * * * * * * * * * * * * * * * * 89 15 6548 * 0 * 0 * 4081 1000 1780 K 90 4018 5985 * * * 4123 5562 6761 1422 5226 * 3770 * 4105 2478 4627 5325 4093 * * 90 17 6440 * 0 * * * 4173 1000 0 C 91 * 44 * * * * * * * 5047 * * * * * * * * * * 91 35 5374 * 1393 691 * * 4169 1423 0 I 92 4925 6312 3513 2395 4725 5195 6834 3339 3284 4307 5109 4823 * 4825 5092 4105 3257 4471 * 6148 92 24 5895 * 0 * * * 4169 1420 0 G 93 5430 6898 1934 3904 * 2255 3687 * 5391 * * 2390 * 5455 5590 3951 5992 * * 6121 93 151 3330 * 1894 452 * * 4169 2341 0 C 94 * 0 * * * * * * * * * * * * * * * * * * 94 0 * * * * * * 4169 0 0 K 95 4515 4371 4197 3461 5380 4145 4184 * 1739 4948 6095 4891 * 3204 3388 5018 * 6393 * * 95 0 * * * * * * 4065 0 0 N 96 * * * * * * * * * * * 0 * * * * * * * * 96 28 5686 * 0 * * * 4059 1000 0 F 97 6694 5768 * * 5014 4231 4777 5838 2686 6515 4233 5906 5459 3600 2303 4710 2737 4207 * 4399 97 0 * * * * * * 3975 0 0 E 98 6384 * 3573 2067 6240 4846 4757 5212 2526 6107 5302 5364 4107 4542 3817 3376 6058 4952 * * 98 53 4793 * 0 * * * 3858 1391 0 E 99 * * 1654 2456 * 2974 * 5432 4303 5715 * 3071 6003 4675 3879 6003 5470 * * * 99 0 * * * * * * 3759 0 0 S 100 * 5691 4472 3468 5157 3846 3274 4405 3916 * * 3470 5771 4132 3883 1845 * 5704 * * 100 39 5235 * 2000 415 * * 3718 1000 0 P 101 5144 * * 1911 * * * * 4294 4812 4769 3548 1366 5158 * 4529 * 4726 * * 101 0 * * * * * * 3549 0 0 E 102 4429 * 2431 1723 * * * * 3652 4109 * 4698 * 3275 4798 3616 3871 * * * 102 0 * * * * * * 3608 0 0 R 103 4297 * * 3830 * 4549 * 4630 2179 3798 * 2700 * 4338 2253 * 5060 4062 * * 103 0 * * * * * * 3586 0 0 K 104 * * * 2239 * * * * 1631 * * * * 2470 2107 4250 * * * * 104 0 * * * * * * 3481 0 0 T 105 2750 * 3044 * * * * * 1343 * * 2887 * * * * 2317 * * * 105 0 * * * * * * 3321 0 0 L 106 * * * * * * * 2245 * 563 3157 * * * * * * * * * 106 0 * * * * * * 2991 0 0 M 107 * * * * 1312 * * 1705 * 2613 2976 * * * * * * * * * 107 0 * * * * * * 2435 0 0 H 108 * * * * * * 543 * * * * * * 1672 * * * * * * 108 0 * * 0 * * * 1361 0 0 //