HHsearch 1.5 NAME c5e5qB_ FAM FILE c5e5qB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5e5qB_.a3m DATE Sat May 21 08:43:05 2016 LENG 63 match states, 63 columns in multiple alignment FILT 51 out of 55 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4545 0.9664 SEQ >ss_dssp CCHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHSCCCSSSSCCGGGCHHHHHCBCTTSCBCCC >sa_dssp EDEDADCDBDEABEECEEDEDBDECACDAADECECCBDDCEDDCEEBDDACDBDDEDEDDCBD >ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >ss_conf 976466888878751378872289989888740676789999557278601011378897887 >Consensus xxxxCxxxCxxRCsxxsxxxxCxrxCxxCCxxCxCVPpGTyGNkxxCpCYxxxxtxxgxpKCP >c5e5qB_ GSNFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP >UniRef50_Q75I50(29-94:94) Os03g0607200 protein n=8 Tax=Poaceae RepID=Q75I50_ORYSJ E=0.0003 s/c=0.70 id=45% cov=102% ASGFCGSKCAVRCGRGRGRGSGCLRsCGLCCEECNCVPTGSGSTRDECPCYRDMLTAgpRKRPKCP >UniRef50_D1HX15(48-106:106) Whole genome shotgun sequence of line PN40024, scaffold_189.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HX15_VITVI E=1e-12 s/c=1.26 id=50% cov=95% ----CPKACNYRCSDTQYLNACLEFCNLCCQKCLCVPSGTYGHKEECPCYNNWKTKEGGPKCP >UniRef50_D1INL9(239-298:298) Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1INL9_VITVI E=7e-18 s/c=1.52 id=43% cov=95% ----CIPLCDQRCKAHSRKNICVRACMTCCDRCKCVPPGTYGNREKCgKCYTDMTTHGNKPKCP >UniRef50_B6UGG6(72-130:130) Gibberellin-regulated protein 2 n=2 Tax=Andropogoneae RepID=B6UGG6_MAIZE E=3e-11 s/c=1.18 id=43% cov=95% ----CGSACGARCALSSRWNLCRRACGSCCARCNCVPPGTAGNHDVCPCYAAITTRGGRPKCP >UniRef50_A9NKC6(46-105:105) Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NKC6_PICSI E=8e-10 s/c=1.08 id=57% cov=95% ----CPTLCDGRCAVAGRANRCLQFCLICCGKCDCVPSGTYGYpPGDCVCYANLKNSKGGHKCP >UniRef50_Q7X885(46-105:105) Os04g0465300 protein n=4 Tax=Poaceae RepID=Q7X885_ORYSJ E=1e-07 s/c=0.96 id=42% cov=95% ----CVGACDARCSEHSHKKRCSRSCLTCCSACRCVPAGTAGNRETCgRCYTDWVSHNNMTKCP >UniRef50_B6SRH2(67-128:128) GIR1 n=2 Tax=Zea mays RepID=B6SRH2_MAIZE E=4e-07 s/c=0.90 id=54% cov=97% --GVCDGKCRSRCSL-KKAGRCMGLCMMCCGKCQgCVPSGPYASKDECPCYRDMKSPKNqRPKCP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1620 * * * * 568 * * * * * * * * * * * * * * 1 0 * * * * * * 1629 0 0 S 2 2670 * * * * * * * * * * * * * * 516 * 2802 * * 2 0 * * * * * * 1820 0 0 N 3 1504 * * * * 1182 * * * * * 3351 * * * 3200 * * * * 3 0 * * * * * * 1966 0 0 F 4 * * * * 830 * * * * 2704 * * * * * * * 3086 3501 3681 4 0 * * * * * * 2195 0 0 C 5 * 0 * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 2909 0 0 D 6 5633 * 3105 5847 * 1213 * 5032 4664 * * 5785 2762 5927 * 3706 5695 4552 * 5361 6 0 * * * * * * 2909 0 0 S 7 4257 * 5898 4106 * 1965 * * 4259 5847 * * 2577 3833 * 2170 5061 5905 * 4625 7 0 * * * * * * 2909 0 0 K 8 1988 * * 3834 * 5800 * * 1524 2840 * * * 4369 3010 * * * * * 8 0 * * * * * * 2909 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 2909 0 0 K 10 3154 * 2629 4777 * 2380 * * 2342 * * 3764 * * 3833 3772 4084 5361 * * 10 0 * * * * * * 2909 0 0 L 11 2698 * 3978 4821 * 3881 * * 4962 5911 * * * 6107 2838 4119 4352 2165 * 2769 11 0 * * * * * * 2909 0 0 R 12 * * * * * * 5084 * * * * * * * 43 * * * * * 12 0 * * * * * * 2909 0 0 C 13 * 43 * * * * * * * * * * * * * 5084 * * * * 13 0 * * * * * * 2909 0 0 S 14 3062 * * * * 3195 * * 2850 * * * * 4872 3522 1019 5823 * * * 14 0 * * * * * * 2909 0 0 K 15 3192 * 5716 3905 * * * * 1953 1825 * 3233 * 4963 3740 * * 4292 * * 15 97 * 3940 * * * * 2909 0 0 A 16 1894 * * * * 3906 2149 * * * * * * * * 2456 1962 * * * 16 0 * * * * 928 1075 2863 0 1455 G 17 * * * * * 2510 6078 * 3847 * * * 5521 2902 4046 932 * * * * 17 0 * * * * * 0 2901 0 1000 L 18 * * 4711 * * 4046 3482 5671 4774 5863 4697 * * * 1055 * * 4820 * 2449 18 0 * * * * * 0 2901 0 1000 A 19 3575 * * * * * 3235 * 1751 5681 * * 2302 3238 3134 * 4913 * 5652 5828 19 0 * * * * 0 * 2901 0 1000 D 20 * * 2623 5843 * 3385 5795 * 1727 * * 1432 * * 5790 * 5997 * * * 20 0 * * * * * * 2909 0 0 R 21 3652 * * * * * * 3631 * 2561 4896 * 2602 * 1973 4058 * 2668 * * 21 0 * * * * * * 2909 0 0 C 22 * 89 * * * 4058 * * * * * * * * * * * * * * 22 0 * * * * * * 2909 0 0 L 23 * 4058 * * * * 4239 5852 4257 1217 2770 5563 * * 5691 4343 3685 3773 * * 23 0 * * * * * * 2909 0 0 K 24 * * * 5716 2763 4809 * * 2751 4058 * * * 5072 986 * 4188 * * * 24 0 * * * * * * 2909 0 0 Y 25 1233 * * * 2003 * * * * 4119 * * * * 4058 5213 * * * 2469 25 89 4058 * 0 * * * 2909 1000 0 C 26 * 0 * * * * * * * * * * * * * * * * * * 26 0 * * * * * * 2909 0 0 G 27 * * * * * 1119 * 4772 5486 3759 3650 2335 * 3788 5860 * * 4668 * * 27 0 * * * * * * 2909 0 0 I 28 * * * * * * * 2373 2418 3660 4809 * * * * 4283 1382 4729 * 4956 28 0 * * * * * * 2909 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 2909 0 0 C 30 * 0 * * * * * * * * * * * * * * * * * * 30 0 * * * * * * 2909 0 0 E 31 2200 * 3581 3165 * 3598 * * 4477 5860 5677 3279 * 3058 4878 3371 * 5221 * 4558 31 0 * * * * * * 2909 0 0 E 32 3941 * 5468 3174 * * * * 1718 4729 * * * 5706 1377 5852 * 4705 * * 32 0 * * * * * * 2909 0 0 C 33 * 0 * * * * * * * * * * * * * * * * * * 33 0 * * * * * * 2909 0 0 K 34 * * 5072 * * 4221 5486 * 1809 2067 * 2466 * 3429 3672 5795 * * * * 34 52 4809 * 0 * * * 2909 1000 0 C 35 * 0 * * * * * * * * * * * * * * * * * * 35 0 * * * * * * 2909 0 0 V 36 * * * * * * * * * * * * * * * * * 0 * * 36 0 * * * * * * 2909 0 0 P 37 5813 * * * * * * * * * * * 63 * * 5321 * * * * 37 0 * * * * * * 2909 0 0 S 38 4049 * * * * * * * * * * * 909 * * 1527 4058 * * * 38 0 * * * * * * 2909 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 2909 0 0 T 40 * * * * 5514 * 4580 * * 5893 * * 4809 * * 4058 341 * * 4878 40 0 * * * * * * 2909 0 0 Y 41 3365 * * * 5321 4058 * * * * * * * * 5552 2494 * * * 692 41 0 * * * * * * 2909 0 0 G 42 4809 * * * * 145 * * * * * * * * * 4058 * * * * 42 0 * * * * * * 2909 0 0 N 43 * * * * * * 3837 * * * * 314 * * * 4809 4058 * * 5072 43 44 5072 * 0 * * * 2909 1000 0 K 44 5563 * * 5973 * * 4239 * 898 * * * 5072 4843 2170 * 5923 * * 3838 44 0 * * * * * * 2909 0 0 H 45 5904 * 1959 1627 * 3869 3031 * * * * 4170 * 3268 * 4872 * * * 5790 45 0 * * * * * * 2909 0 0 E 46 4673 * 5072 1406 * * * * 3435 3357 4578 * * * * 5941 3708 2127 * * 46 0 * * * * * * 2909 0 0 C 47 * 0 * * * * * * * * * * * * * * * * * * 47 351 2213 * 0 * * * 2909 1777 0 P 48 5468 * * * * * * * 2597 * * * 568 * 5213 3911 6102 5072 * * 48 0 * * * * * * 2909 0 0 C 49 * 0 * * * * * * * * * * * * * * * * * * 49 0 * * * * * * 2909 0 0 Y 50 * * * * * * * * * * * * * * * * * * 5375 35 50 0 * * * * * * 2909 0 0 R 51 2024 * 5917 * * 4807 * * * * * 2171 * * 1840 * 2319 * * * 51 0 * * * * * * 2909 0 0 D 52 5691 * 1119 * * * 5677 * * * * 1483 * * * 3224 4793 * * * 52 0 * * * * * * 2909 0 0 K 53 * * * * * * * 4283 2722 2674 1441 * * * * * * * 1879 * 53 0 * * * * * * 2909 0 0 K 54 * * * * * * * 5677 1075 3119 * * * * 4116 * 1897 5213 * 4729 54 0 * * * * * * 2909 0 0 N 55 * * * * * * * 5321 * * * 2924 * * * 3012 475 * * * 55 0 * * * * * * 2909 0 0 S 56 3692 * * * * 4729 1380 * 2525 * * * 4809 4400 3874 2508 * * * * 56 89 4058 * 1000 1000 * * 2909 1000 0 K 57 * * * 3050 * 1420 5801 * 2291 * * 4045 * 4234 3081 6200 * 4729 * * 57 0 * * * * * * 2909 0 0 G 58 * * * * * 629 5486 * 3622 * * 2001 * * * * * * * * 58 84 4137 * 0 * * * 2909 1451 0 K 59 * * * 5563 * 2088 * * 1534 * 5213 4852 * 3769 2055 * 5468 * * * 59 0 * * * * * * 2909 0 0 S 60 * * * * 6015 * 3647 * * 4320 * * 765 * 3766 3813 3041 * * * 60 0 * * * * * * 2909 0 0 K 61 * * * * * * * * 90 * * * * * 4049 * * * * * 61 0 * * * * * * 2909 0 0 C 62 * 63 * * * * * * * * * * * * 4542 * * * * * 62 0 * * * * * * 2903 0 0 P 63 * * * * * * * * * * * * 0 * * * * * * * 63 0 * * 0 * * * 2903 0 0 //