HHsearch 1.5 NAME c5dtcA_ FAM FILE c5dtcA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5dtcA_.a3m DATE Sat Dec 5 08:12:07 2015 LENG 87 match states, 87 columns in multiple alignment FILT 66 out of 70 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.4425 1.1788 SEQ >ss_dssp CCEEEEEEEECCSCGGGCCCCCCEEEETTCCHHHHHHHHHHHHTCSSCCCEEEEETTEECCSCHHHHHHHHTCCTTSEEEEEEEECC >sa_dssp EEDADADBDCEBEDEEBDCEEEDCEADCECEDECABECABEDCECEEECEABACAEEDDBEDBADDCBEEDEDDCECEBCACACEDE >ss_pred CCEEEEEEEECCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCHHHHHHHCCCCCCEEEEEEEEECC >ss_conf 954999998348753020588728701557988999999998517899865599868676313899999739985306999999759 >Consensus xxqvxvxFxTxxxdxxxxvxxxxxxVPxxxxrxxLsxliNxLLxxexxxpFdFlixxxxLrxsLxxxlxxxxissExxlxIeYxxai >c5dtcA_ KSQVKIRFFTREKDELLHVQDTPMYAPISLKRYGLSEIVNHLLGSEKPVPFDFLIEGELLRTSLHDYLTKKGLSSEASLNVEYTRAI >UniRef50_C6KTE0(76-162:498) Microtubule-associated protein ytm1 homologue, putative n=6 Tax=Plasmodium RepID=C6KTE0_PLAF7 E=4e-20 s/c=1.14 id=30% cov=99% --EIQICFFTNIENEKYKIDSSTYTVPVTFKRIDLSRMVKKLLDIEDNVSFEFLINKKILRTTIEEFIRDHNILSENVIEIEYSISL >UniRef50_D2VAJ5(59-120:548) WD40 domain-containing protein n=1 Tax=Naegleria gruberi RepID=D2VAJ5_NAEGR E=0.0007 s/c=0.73 id=23% cov=70% -----VEFVSGIDDEK---SGTTVEIDANMSKLQLNQLLNSnlFLDNTEELPYSFSVNGEEIQASVRDTL------------------- >UniRef50_A8BAA9(2-82:512) Notchless n=2 Tax=Giardia intestinalis RepID=A8BAA9_GIALA E=8e-05 s/c=0.60 id=18% cov=69% ----------------------TLEIPEDTTGADLQEVLRTFRATDPddvPIKYSFFIGTTEVRGSLKQAIEAAAVSTETTVII------ >UniRef50_C3Z5L8(7-93:432) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z5L8_BRAFL E=5e-18 s/c=1.06 id=32% cov=94% --HVQAKFFTKQP--QFTVSEDVFSVPATVTTLELNDLINGLLSSADgdgeslRREFDFLVEGEFLRLPLNTHMQNKGLTAERVVSIEFLL-- >UniRef50_Q9NVX2(16-94:485) Notchless protein homolog 1 n=82 Tax=Eukaryota RepID=NLE1_HUMAN E=3e-16 s/c=1.09 id=24% cov=92% ------RLLVQFQDEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGKTLESQAVETEKVLDIIYQP-- >UniRef50_B3L5R4(13-103:639) Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi strain H RepID=B3L5R4_PLAKH E=5e-12 s/c=0.79 id=26% cov=90% --QILIQFVNHENKSTGPV----INVPLSITKENLDQLINDLNaknensiqddDQQENISYSFMINDKLaIKNNLYDTIKDNTISSEDILRIKY---- >UniRef50_C4LXF5(3-78:463) WD domain containing protein n=4 Tax=Entamoeba RepID=C4LXF5_ENTHI E=3e-10 s/c=0.87 id=20% cov=70% -----------------SEPSQVFEIPEETNTKELNALVNKLNKtEEEPFPYSFYTDGIQITDNIP------NKGAEQVVTITY---- >UniRef50_P91343(18-107:439) Ribosome biogenesis protein WDR12 homolog n=1 Tax=Caenorhabditis elegans RepID=WDR12_CAEEL E=4e-17 s/c=0.99 id=23% cov=100% QKHVQITFFSKDEEIP-QIPDAVFDVPTGAECDDMNLLLNKTIEANDgawkERRFEFLVGETFLRTSLAEFIEEYEVETETILKVECVIGI >UniRef50_B7FSP6(25-131:499) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSP6_PHATR E=5e-12 s/c=0.67 id=31% cov=98% --QIRVSLTLAVEctDRSLEVPSEVIAVPATIGRQGLSAVINHLLDRRianedgtdmeddeeaddrlPALKFDFILgrNNKLLRTGVEKEARRSGISLEE AILVTYFPA- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 1824 * * * * 1789 * * * * 2033 2443 * * * * * 1 0 * * * * * * 2459 0 0 S 2 1412 * * * * * * * 3236 * * 4012 * * * 1555 3109 * * * 2 0 * * * * * * 3342 0 0 Q 3 * * * 1921 * * 2746 * * * * * * 769 * * * * * * 3 0 * * * * * * 4369 0 0 V 4 * * * * 5807 * * 1635 * 3042 5381 * * * * * * 958 * * 4 0 * * * * * * 4719 0 0 K 5 5871 * * 3267 * * * * 4033 3765 * * 4967 1250 2760 5895 4683 4745 * 4289 5 0 * * * * * * 4719 0 0 I 6 3119 4357 * * * 4885 * 1724 * * * * * * * * 4945 1098 * * 6 0 * * * * * * 4874 0 0 R 7 * 5421 * 5466 5671 * 4629 * 1891 * * 5319 * 3042 2344 3613 3007 3741 * * 7 0 * * * * * * 4941 0 0 F 8 * * * * 355 * * * * 2196 * * * * * * * * * * 8 0 * * * * * * 4941 0 0 F 9 * * 5459 * 1894 * * 4705 5420 4895 5638 * * * 5222 4027 2788 1822 5686 4117 9 64 * 4525 * * * * 4941 0 0 T 10 5290 * * * * * * * * 5055 * 3204 * * * 3559 483 4816 * * 10 21 * 6145 * * 0 * 4883 0 1095 R 11 5116 * 4985 4615 * 5489 4382 * 1667 5401 * 2922 * 3156 2520 5434 4367 * * * 11 70 * 4409 * * * 0 4964 0 1000 E 12 * * 3871 2443 4066 3938 * 3924 * 2047 * 3837 * 2834 * 5300 4335 5065 * * 12 91 * 4029 * * 2163 365 4971 0 1812 K 13 * * 5380 2645 * 4042 * * 2082 * * 4744 1982 3394 * 4113 5386 * * 4263 13 445 5052 2088 1000 1000 1104 903 4936 1000 2628 D 14 * * 1123 2306 * * * 5066 3380 * * 4981 * 5051 * 3496 4005 * * * 14 143 * 3406 * * 2061 395 4776 0 3699 E 15 4644 * 3153 1204 * 5698 * 3236 4708 4132 * * 5276 5604 4783 4557 4779 * * 5004 15 325 * 2308 * * 464 1864 4742 0 3685 L 16 4349 * * 5183 * 4152 4511 * 2093 4264 * 5621 3400 3017 3202 3510 4643 4014 * * 16 227 * 2779 * * 361 2175 4836 0 3579 L 17 4848 * * * 2708 3666 * 3765 * 2257 * * 5291 * * * * * * 1234 17 0 * * * * 908 1099 4761 0 3324 H 18 3876 * 3528 3334 * * 3923 * 3476 * * 5754 3198 2471 3445 2958 4560 5669 * * 18 40 * 5203 * * 1499 630 5023 0 2235 V 19 4664 * * 4016 * * * 1891 * 2929 4302 * * * * * 4761 1286 * * 19 41 * 5165 * * 1495 632 5001 0 1990 Q 20 5120 * 3382 3750 * 4944 * * * 4846 * * 1208 4821 * 2489 3516 * * * 20 0 * * * * 1576 590 4986 0 1947 D 21 * * 1635 2462 * 3244 * * 5420 5591 * 5460 4788 5517 5955 2562 4327 * * 5021 21 30 * 5609 * * * 0 5045 0 1597 T 22 3552 * 2809 4633 * 3833 5707 * * * * 3376 5575 3479 5404 3491 1946 3983 * * 22 0 * * * * 1636 560 5028 0 2145 P 23 4171 * * 4025 * * * * 5790 4750 * 5677 1335 4470 * 3697 2532 3100 * * 23 32 5520 * 0 * 0 * 5149 1000 1704 M 24 * * * * 1451 * * 1929 * 2451 4663 * * * * * * 4568 * 3223 24 0 * * * * * * 5079 0 0 Y 25 2226 * 3023 3225 5153 * * 5993 5967 3840 3617 4370 * * * 2257 5755 4572 * 5212 25 0 * * * * * * 5079 0 0 A 26 6093 * * * * * * 1780 * 2540 * * * * * * * 937 * * 26 0 * * * * * * 5099 0 0 P 27 5480 * 4367 5188 * * * * * 6018 * * 324 5679 * 3876 * * * * 27 0 * * * * * * 5099 0 0 I 28 2556 * * 4668 * 2936 5842 4939 * 4071 * * * 5573 * 2668 1755 3721 * * 28 0 * * * * * * 5118 0 0 S 29 4098 * 2391 4820 * 4891 5573 5995 4966 * 5677 2775 * 5918 4257 2216 2760 5980 * * 29 0 * * * * * * 5118 0 0 L 30 3608 * * * 4265 * * 2379 * 1984 3843 * * * * 3443 3297 3374 4406 6155 30 0 * * * * * * 5118 0 0 K 31 * * 3761 4005 * 3160 * * 3646 5299 * 3330 * * 2807 4590 1462 * * * 31 27 * 5741 * * * * 5118 0 0 R 32 * 3844 * 5689 * 5682 4989 4340 3937 * * * 3003 5679 1139 5384 3757 4351 * * 32 0 * * * * * 0 5099 0 1000 Y 33 3641 * 2473 3639 4878 4922 * 5772 3162 3009 6250 5756 * 3933 5205 4081 6515 5719 * 3001 33 0 * * * * 0 * 5099 0 1000 G 34 4590 * 2686 2295 * 1579 * * 5857 * * 4230 * 3066 5559 4224 * * * * 34 0 * * * * * * 5118 0 0 L 35 * * * * * * * * * 34 5405 * * * * * * * * * 35 0 * * * * * * 5118 0 0 S 36 5442 * 4874 5842 * * * * * * * 1794 * 3715 * 877 5918 * * * 36 0 * * * * * * 5118 0 0 E 37 2817 * 3687 2191 * * * * 4324 3667 5857 3645 * 3013 3797 4129 3596 * * * 37 0 * * * * * * 5118 0 0 I 38 5820 * * * 5739 * * 3209 * 819 3319 5706 * * * * 5763 2729 * * 38 0 * * * * * * 5118 0 0 V 39 4824 4686 * * * * * 1405 * 2155 * * * * * * * 1627 * * 39 0 * * * * * * 5118 0 0 N 40 * * * * * * 4431 * 4192 * * 369 * 4487 4041 * * 5706 * * 40 32 5489 * 0 * * * 5118 1000 0 H 41 3649 * 3951 4104 * 3615 2830 * 2542 * * 3961 * 2651 * 3507 3813 5573 * * 41 21 6099 * 1000 1000 * * 5118 1000 0 L 42 4894 * * * 4885 * * * * 393 4830 * * * * 5489 4141 4142 * * 42 23 5991 * 2585 263 * * 5118 1000 0 L 43 * * * * * * * 3745 * 262 5489 4700 * * 5028 * * * * * 43 90 4051 * 2711 239 * * 5118 2378 0 G 44 3381 * 2225 2754 * 2886 5818 * 3592 4211 * 3642 * 5144 4722 3242 * * * * 44 29 5659 * 0 * * * 5014 1000 0 S 45 3311 * 4322 3057 5902 * 5729 5785 * 2609 * 2718 * 3034 4311 3836 3448 5298 * * 45 70 4402 * 1748 510 * * 5014 2070 0 E 46 5066 * 3283 1157 * 5348 * 5928 4507 * * 4570 4967 3533 5173 3879 3998 6029 * * 46 168 3185 * 3386 145 * * 5014 3037 0 K 47 * * 1952 2230 * 5298 5655 * 2430 * * 3175 3446 * 5525 4367 5327 * * * 47 233 2743 * 2362 312 * * 5014 3453 0 P 48 4621 * 3564 3217 * * 3106 * 5754 * * 4741 1541 3929 5059 3133 5071 6366 * * 48 158 3671 5298 2561 268 * * 5014 2689 0 V 49 6561 * 5645 6349 5635 * * 2643 4411 3278 * * 5009 6151 3971 4082 2734 1696 * * 49 49 4906 * 1678 540 0 * 4965 1557 1000 P 50 3674 * 4373 3476 * * * 6136 3812 * * 5304 997 4376 5348 3799 * 5211 * * 50 94 3983 * 2347 316 * * 5013 2364 0 F 51 * * * * 461 * * * * 5001 * * * * * * * * * 2044 51 0 * * * * * * 5013 0 0 D 52 3368 * 773 3286 * * * * * * 5537 6432 * * * 2624 5630 * * * 52 0 * * * * * * 5013 0 0 F 53 * * * * 80 * * 4213 * * * * * * * * * * * * 53 0 * * * * * * 5013 0 0 L 54 5854 5654 * * 2968 * * 2848 5921 918 4253 * * * * 6074 * * * 3590 54 0 * * * * * * 5013 0 0 I 55 4608 * * * 5704 * * 1059 * 3903 * * * * * * 5682 1522 * 5304 55 68 4441 * 3283 156 * * 5013 2209 0 E 56 * * 2447 3666 5722 3774 4653 * 3142 5718 * 1317 * 5132 * 4512 * * * * 56 0 * * * * * * 5013 0 0 G 57 * * 2368 3219 * 1307 6150 5396 5790 * * 3037 * 6130 * 3915 5609 * * 5987 57 0 * * * * * * 5013 0 0 E 58 5232 * 4784 1497 * * 6593 4263 3002 6521 * 4287 * 3688 6424 3465 3497 3940 * * 58 43 5076 * 1608 574 * * 5013 1515 0 L 59 * * * 2797 1782 * * 3455 * 2085 * 5654 5704 5682 4096 5765 * 5891 * 3535 59 85 4135 * 0 * * * 5013 1691 0 L 60 * * * * 6017 * * 2238 * 635 5737 * * * * * * 3189 * * 60 0 * * * * * * 5013 0 0 R 61 * * * 4824 * 5304 5737 * 4047 4705 * * * 5194 593 * 3582 4384 * * 61 42 5116 * 622 1514 * * 5013 1643 0 T 62 5146 6286 3951 4741 * 2441 5857 * 6710 4217 5485 4914 * 5921 * 2885 1454 5654 * * 62 35 5396 * 1585 585 * * 5013 1000 0 S 63 5228 * 6424 5784 * 4812 * * * * * 4699 4590 * 5722 950 1780 * * * 63 0 * * * * * * 5013 0 0 L 64 * * * * 5654 * * 3306 * 307 * * * * * * 5396 4407 * * 64 29 5654 * 1585 585 * * 5013 1000 0 H 65 2449 5722 3596 2034 5304 3311 4211 * 5609 6150 * 5901 5682 4197 4873 3736 * 6598 * 4438 65 28 * 5682 * * * * 5013 0 0 D 66 4503 * 2283 1588 * 5824 * * 2787 * * 6410 * 4044 5271 3298 4732 * * 5818 66 0 * * * * * 0 4975 0 1000 Y 67 3886 * * 4643 2171 * 2243 * 5640 3278 * * * * * * 3970 4394 4937 2382 67 21 6112 * 0 * * 0 4975 1000 1000 L 68 5196 6016 5625 * 4835 * * 2093 * 1115 3226 * * * * * * 3607 * 5902 68 31 * 5566 * * * 0 4977 0 1000 T 69 4837 * * 2123 * * 6093 6310 2864 3831 * 5564 * 2789 3026 4190 3245 5210 * 5337 69 0 * * * * * 0 4930 0 1524 K 70 3083 * 3794 2238 * * * 5567 3375 4769 6504 5086 * 3396 2953 2914 4427 * * * 70 26 5830 * 0 * 905 1101 4930 1000 1524 K 71 4848 6016 * 3890 * 4657 3276 * 2348 4448 * 2139 * 3830 3336 5529 * * * 3657 71 0 * * * * 0 * 4955 0 1000 G 72 3255 * 4181 2557 * 1417 5016 * 4265 * * 2840 * 4930 * 5608 5664 * * * 72 28 5695 * 0 * * * 4991 1000 0 L 73 * * 6123 * * 5878 5737 1207 4074 2266 * * 5608 6261 * * * 2212 * * 73 0 * * * * * * 4991 0 0 S 74 5738 * 5878 3703 * 4021 5737 5526 5679 5778 5637 6108 4279 4793 * 875 3958 * 5978 * 74 28 5695 * 0 * * * 4991 1000 0 S 75 2771 5296 * 4186 5686 * * 6362 * 4784 * * 4930 5437 * 1748 1738 4270 * * 75 0 * * * * * * 4991 0 0 E 76 * * * 0 * * * * * * * * * * * * * * * * 76 32 * 5501 * * * * 4990 0 0 A 77 3563 * 3214 4100 * * * * 2945 * * 5705 * 3133 5612 2029 2554 4307 * * 77 0 * * * * 0 * 4957 0 1000 S 78 3079 * * * 6405 * * 2100 6184 4766 * 5613 * 5864 * 4074 2124 1946 * * 78 0 * * * * * * 4990 0 0 L 79 * 5592 * * 5685 * * 1699 * 1079 5599 * * * * * * 2664 * * 79 0 * * * * * * 4990 0 0 N 80 * * 3306 1910 * * 5421 5502 2914 4841 * 4046 * 3334 5660 3609 2767 6429 * * 80 0 * * * * * * 4990 0 0 V 81 * * * * * * * 777 * 2376 * * * * * * * 2159 * * 81 0 * * * * * * 4990 0 0 E 82 * * * 761 * * 6092 4918 4815 4157 * * * 5563 5586 * 3294 3482 5554 5991 82 0 * * * * * * 4913 0 0 Y 83 * 4469 * * 4606 * * * * * * * * * * * * * * 130 83 0 * * * * * * 4903 0 0 T 84 * * * * 3968 * * 2016 * 2848 * * * 2565 * 5304 2990 2122 * * 84 0 * * * * * * 4805 0 0 R 85 * * * 2756 4304 * * 3749 4751 2249 * * 1765 5065 2858 * * 5839 * * 85 0 * * * * * * 4805 0 0 A 86 737 * * * * 3816 * * * * * * * * * 2040 3542 * * * 86 0 * * * * * * 4305 0 0 I 87 * * * * * * * 1700 * 1600 3754 * * * * * * 1796 * * 87 0 * * 0 * * * 4106 0 0 //