HHsearch 1.5 NAME c5dn6I_ FAM FILE c5dn6I_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5dn6I_.a3m DATE Sat Oct 31 08:40:06 2015 LENG 75 match states, 75 columns in multiple alignment FILT 109 out of 412 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4414 0.2686 SEQ >ss_dssp CCSSSCSCCSCEEEEEEEBSSSEEEECTTCCCEEEEECSEEEEEEETTSCEEEEEECCEEEEECSSCEEEEECCC >sa_dssp DDEDCDEEEEEDCCCCCCCEEDECECDEECEEEEDDCCDDDCCCCDEEEDDDDCECCBCCDCCDDDEDDDDDCDE >ss_pred CCCCCEEECCEEEEEEEECCCCEEEECCCCEEEEEEECCEEEEEEECCCCEEEEEECCEEEEEECCEEEEEEECC >ss_conf 978727863414299997167247986898307998055489999589868999993448999799799999759 >Consensus VTPxxxxxxxxvxxvxxxtxxGxxgILxxHxpxitxLxxgxxxixxxdgxxxxxxvxxGxxxvxxnxvxIladxx >c5dn6I_ VSPERNLVSVPVREVRLPGADGDLTAMPGHAPAIVNLRPGLVTVVAGDGSETEFAVTGGFAEINNESVTLLAERG >UniRef50_A8RTW9(9-82:138) Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTW9_9CLOT E=4e-09 s/c=0.85 id=22% cov=99% VASDHIFYNGHCSYLAVPAPDGEMGIMPHHEAMILAIQEGNLRFKVPEETEWHQAIVGrGILQVANNRVTMIVD-- >UniRef50_C5CIV3(8-79:138) ATP synthase F1, epsilon subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV3_KOSOT E=7e-08 s/c=0.81 id=21% cov=97% VTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEI-KSKGERLLFAVHGGYILNTREKTLIVAD-- >UniRef50_B1AIB7(10-83:136) ATP synthase epsilon chain n=15 Tax=Ureaplasma RepID=ATPE_UREP2 E=3e-09 s/c=0.85 id=18% cov=99% VTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRElPNTPRKPLLLLDGIVYIEQHQVRVFSD-- >UniRef50_B3PLV9(10-81:119) ATP synthase epsilon subunit n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PLV9_MYCA5 E=4e-10 s/c=0.91 id=14% cov=96% -TPNGNFLDSQAEIVTFQSTEGQMGIMAGATEFMCAIVPSQLFINHENSEnRQVYYVDKGILHFKDDKLSLIV--- >UniRef50_B3ET24(6-78:82) Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET24_AMOA5 E=5e-12 s/c=0.99 id=19% cov=99% ITRNKQIFQGNITSLTVPGTAGCFQILANHAPIISSLGNGKVVYTDAQSQDHNLVIEKGVVSVHDNQIKLLVE-- >UniRef50_C7RSR1(19-83:134) F0F1-type ATP synthase epsilon subunit-like protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSR1_9PROT E=2e-06 s/c=0.83 id=19% cov=83% ---------DKVQSFVGSDASGSFGIQPGRARFMTVLDYGLSRFRTTQVAWQYLACPGAVLRFADDQLTI----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 1391 * * * * * * * * * 693 * * 1 0 * * * * * * 6212 0 0 S 2 3166 5569 * * * * * * * * * 6642 * * 6515 2188 673 * * * 2 0 * * * * * * 6576 0 0 P 3 5590 * * * * * * * * 6351 5546 * 237 5833 6518 4102 * 6628 * * 3 12 6957 * 0 * * * 6656 1000 0 E 4 5716 * 2032 1848 * 5539 6665 * 6248 4924 5307 3155 * 5361 6932 3865 3981 5032 * 4360 4 0 * * * * * * 6685 0 0 R 5 3657 * 6799 4371 6258 1703 5460 * 2083 * * 6281 6425 4285 2551 4716 * * * * 5 0 * * * * * * 6680 0 0 N 6 4152 5165 6642 3816 4886 * 7169 2300 3577 3983 5030 5307 4709 4226 * 4967 3589 2463 * * 6 16 6533 * 0 * * * 6828 1000 0 L 7 3631 * * * 2358 * * 2526 4922 2572 6558 * * * * 6690 5436 2033 * 4021 7 13 6826 * 0 * * * 6828 1000 0 V 8 6621 * * 5755 1601 * * 5364 6542 2862 * * * 6977 4607 * 6103 4402 3209 2000 8 23 6807 7237 0 * * * 6868 1000 0 S 9 4858 * 2403 2103 6099 * 5610 * 4861 * * 2726 * 4827 4719 2300 5144 5753 * * 9 48 5507 6537 0 * 0 * 6870 2173 1000 V 10 5493 6548 2717 3129 6051 1262 5406 6370 5496 6425 6303 4830 * 4996 5987 5926 4008 5279 * * 10 41 5724 6824 0 * * 0 6882 1622 1000 P 11 4077 6275 2784 1761 5276 * 5737 * 3219 5176 * 4687 4915 3426 4976 6589 3585 6948 * 6728 11 70 4391 * 0 * 0 * 6885 3045 1673 V 12 1870 5134 * * * 5879 * 3262 * 5409 * * * * * 5891 5158 976 * * 12 8 7539 * 0 * * * 6894 1000 0 R 13 4745 * 2565 1786 * * * 6295 3221 4260 * 5692 6791 4489 4256 3488 4256 5031 * 4873 13 0 * * * * * * 6894 0 0 E 14 4370 * 6548 3281 3777 5440 6386 3853 4148 4721 3700 6722 * 3853 4002 2023 5479 * * 3643 14 0 * * * * * * 6894 0 0 V 15 4896 6882 * * 4288 * * 2786 * 2268 6059 * * * * * 5297 961 * * 15 0 * * * * * * 6894 0 0 R 16 5689 * 5733 4242 4965 * * 3535 7229 4319 * 3829 * 4796 4625 2863 2415 2117 * 4985 16 0 * * * * * * 6894 0 0 L 17 3230 5256 * * 3471 4540 * 3012 * 1754 6623 * * * * 5759 5322 1944 * * 17 0 * * * * * * 6894 0 0 P 18 7051 * 5539 3908 * 6708 7121 * 2587 * 6722 6005 1481 4140 2622 4489 4163 * * 5759 18 0 * * * * * * 6894 0 0 G 19 3431 * 4364 * * 1919 * 5681 * 5210 7080 5821 * * * 3057 1425 5049 * * 19 0 * * * * * * 6894 0 0 A 20 3140 * 5993 4493 7293 6753 6386 3024 4238 5114 5646 5771 4199 5196 6951 3118 2381 2655 * * 20 0 * * * * * * 6894 0 0 D 21 3971 * 1890 1969 5720 3782 6444 6319 * 5649 6719 4912 * 5031 6791 4673 3224 4615 * 7378 21 16 6548 * 0 * * * 6894 1000 0 G 22 6000 * * * * 23 * * * * * * * * * * * * * * 22 0 * * * * * * 6894 0 0 D 23 4559 6628 2697 1725 * 4779 * 6791 5389 * 4709 6954 4910 3422 5737 3447 5713 5785 * 3308 23 0 * * * * * * 6894 0 0 L 24 5913 * * 7140 2028 * * 2309 6438 2485 3018 * * 5051 4193 6682 5992 4017 6872 4831 24 0 * * * * * * 6894 0 0 T 25 4201 6444 * 4025 * 793 6354 5301 * * 5015 * * 4723 * 5128 2985 4872 * * 25 0 * * * * * * 6894 0 0 A 26 6986 * * * 3787 * * 1019 * 3968 6047 * * * * * 6708 1566 * * 26 0 * * * * * * 6894 0 0 M 27 * * * * 4824 * 6386 * 6354 600 2736 6295 * 5157 6784 * 5477 * 5602 4721 27 14 6682 * 0 * * * 6894 1000 0 P 28 2069 * 6989 4605 6295 7180 5809 6722 3774 6386 * 4722 1322 6708 5324 4193 5427 6658 * 5609 28 0 * * * * * * 6894 0 0 G 29 6793 * 3287 4525 * 1737 3253 * 6668 * 6670 1546 * 4561 4811 * * * * * 29 0 * * * * * * 6894 0 0 H 30 5042 * 6261 * * * 273 * * * 6643 * * * 3532 * 5913 * * 5993 30 0 * * * * * * 6894 0 0 A 31 2263 4747 * 3026 7180 5202 * 2993 * 5184 3654 5757 * 4444 5652 3734 3521 3205 * 6658 31 0 * * * * * * 6894 0 0 P 32 4143 * 3272 4341 * * * * 5759 5938 * 3876 940 4808 4830 4007 4911 * * * 32 0 * * * * * * 6894 0 0 A 33 4961 5238 * 5336 2929 * * 2841 * 1734 3255 * * 6548 * 5913 3689 4513 * 3446 33 0 * * * * * * 6894 0 0 I 34 5133 5185 * * 6438 * * 1608 * 2094 3796 * * * * 6765 5486 1906 * * 34 0 * * * * * * 6894 0 0 V 35 2226 5231 * 6861 5913 3966 * 4531 * 4754 5361 * * * * 2576 1552 4134 * * 35 0 * * * * * * 6894 0 0 N 36 2239 * 5228 3838 5657 4666 * 4946 5338 4174 5167 4381 4071 4700 4189 3887 3078 3376 * 6838 36 0 * * * * * * 6894 0 0 L 37 6724 * * * 6217 * * 2026 * 674 * * * * * * 5139 3716 * * 37 14 6726 * 0 * * * 6894 1000 0 R 38 4213 * 2906 3331 * 3298 5290 4814 2804 5481 * 4547 * 4606 3695 4625 4632 2805 * * 38 0 * * * * * * 6894 0 0 P 39 4834 * 4594 4828 5367 5082 * 3148 6319 5242 4766 4079 1571 * 4578 3699 4791 4510 * 4282 39 0 * * * * * * 6894 0 0 G 40 5791 4386 4877 * 6708 587 5509 * * * * 5811 * * * 2727 5382 * 6658 * 40 0 * * * * * * 6894 0 0 L 41 * * 5798 2358 * 6196 6929 2686 3957 2976 4676 5152 5791 4717 6560 5415 3764 2543 * 5989 41 0 * * * * * * 6894 0 0 V 42 3712 5421 * * 5541 5206 * 2393 * 1746 3736 * * * * 5708 4946 2078 * * 42 12 * 6900 * * * * 6894 0 0 T 43 6422 * 6034 4458 6723 * 4657 5440 2235 5228 6774 6650 * 4862 1941 3501 3228 4018 * 4451 43 11 6987 * 2000 415 0 * 6892 1000 1000 V 44 6705 6779 * * 3133 * * 1304 * 2899 6744 * * * 7233 6903 6708 2264 6444 3743 44 39 5859 6731 1000 1000 * * 6894 1264 0 V 45 5781 * 5139 3929 6103 5675 4458 3348 2209 5525 * 5101 * 4599 3013 * 3172 3027 6599 4892 45 11 7042 * 2322 322 0 * 6885 1000 1000 A 46 4450 * 2522 3894 4623 6719 6733 4308 3194 5245 5778 4827 6895 4520 3941 3687 3377 3870 * 4200 46 169 5188 3585 382 2103 * * 6894 2187 0 G 47 2791 * 3779 2864 * 4024 * 5197 3023 4779 5154 3832 3153 5344 5471 3608 5099 5156 * * 47 53 6891 5191 1585 585 0 * 6851 1000 3969 D 48 5839 * 1290 2987 * 4022 6861 * 3645 * * 2786 6966 4966 * 4429 4497 5519 * * 48 143 5850 3700 1000 1000 0 * 6892 1679 2113 G 49 4522 * 4892 4610 6791 998 6921 6308 4307 * * 3080 * 5466 6704 3183 5670 5593 * * 49 53 * 4804 * * 0 * 6867 0 3873 S 50 5349 * 5066 2336 * * 7074 * 2916 6939 * 4074 4257 3289 4595 3093 2501 4317 * * 50 14 6694 * 0 * 0 * 6850 1000 2274 E 51 * * 3231 2275 * * 6900 4431 3117 3935 5528 6744 7069 5109 3408 4510 4251 3669 3408 5601 51 62 5114 6217 0 * * * 6894 2168 0 T 52 * * 4005 3681 4882 5471 3418 3351 2718 3925 5781 4806 * 4537 2941 4714 4492 4209 6480 5729 52 38 7094 5724 1000 1000 0 * 6863 1000 1000 E 53 5851 * 5537 3057 4137 6425 4954 4957 3386 4064 * 4669 4360 6140 2967 3225 4566 3846 * 3267 53 19 6240 * 3907 100 0 * 6889 1000 1657 F 54 3253 4984 * * 2181 5541 * 3033 * 2789 4189 * * 6484 * * * 2989 6548 2719 54 9 * 7293 * * * * 6894 0 0 A 55 1585 * * 5743 2741 5016 5533 4403 5781 4241 6698 * 6311 * 5753 4841 4283 3010 * 3710 55 25 6983 6754 3170 170 0 * 6900 1000 1000 V 56 6559 4673 * * * * * 1593 * 3428 * * * * * 5585 4026 1207 * 6566 56 0 * * * * 0 * 6889 0 1000 T 57 3826 * 2844 3910 5182 3253 5338 5506 6354 4733 4883 4636 6458 5841 5723 1790 3783 6484 * * 57 0 * * * * * * 6894 0 0 G 58 5626 * 3174 4489 6651 1177 * * 4646 6205 * 3565 * 6633 5303 2992 4878 * 6837 5036 58 16 6481 * 0 * * * 6889 1000 0 G 59 4581 * * * * 106 * * * * * * 5749 * * 6538 * * * * 59 0 * * * * * * 6889 0 0 F 60 5993 * * * 1786 * 6837 1993 * 3131 4782 * 6468 * * 5632 5909 2780 * 3470 60 0 * * * * * * 6889 0 0 A 61 2509 5534 * * 4741 * * 3421 * 1710 3593 * 6471 * * * 6657 2020 * 5996 61 0 * * * * * * 6848 0 0 E 62 6698 6923 6754 1664 5044 * 4925 * 3852 4936 6691 6551 * 3048 4564 2811 5075 3803 * 3948 62 0 * * * * * * 6840 0 0 I 63 5043 5876 * * 3192 * * 2297 4803 4927 3817 6709 * * * 5053 * 1119 * * 63 23 5993 * 0 * * * 6840 1000 0 N 64 3266 * 3289 3350 6633 5691 6624 5553 3377 4717 5838 2836 * 4514 3987 3549 3207 4559 * * 64 31 5572 * 0 * * * 6826 1640 0 N 65 4736 * 2503 4844 6709 3459 5908 * 2994 5252 * 1938 3534 4067 6703 4378 6976 * * 6692 65 14 6682 * 0 * * * 6826 1000 0 E 66 6963 5963 2476 3204 * 3565 5623 * 5499 * 6496 1219 * 5757 6619 4909 4657 * * 5752 66 0 * * * * * * 6826 0 0 S 67 * * 4357 2600 4904 4683 5782 * 2634 4800 * 3857 * 3896 2870 3585 5400 3310 * 5792 67 0 * * * * * * 6826 0 0 V 68 3228 3804 * * * 5500 * 3443 * 3124 4568 * * * * 6446 3790 1098 * * 68 0 * * * * * * 6823 0 0 T 69 * * 6793 4453 6651 6333 6621 3589 3427 4202 * 3175 * 4193 3867 3051 2151 3641 * 5476 69 0 * * * * * * 6669 0 0 L 70 6745 * * * 5968 * * 806 * 3308 4669 * * * * * 6444 1994 * * 70 0 * * * * * * 6672 0 0 L 71 4192 * * * 4170 * * 2197 * 1076 4673 * * * * 4812 * 3030 * * 71 40 5178 * 1585 585 * * 6601 2162 0 A 72 1118 5595 * * * 6680 * 4772 * * * * * * * 4472 1968 2544 * * 72 0 * * * * * * 6576 0 0 E 73 * * 892 1326 * * * * 6252 * * * 6169 * 5679 6004 * * * * 73 0 * * * * * * 6186 0 0 R 74 * * * * * 4789 4587 * 2330 * * 4527 * 2915 1004 * * * * 4364 74 0 * * * * * * 4960 0 0 G 75 * * * * * 0 * * * * * * * * * * * * * * 75 0 * * 0 * * * 2874 0 0 //