HHsearch 1.5 NAME c5dleD_ FAM FILE c5dleD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5dleD_.a3m DATE Sat Nov 7 08:18:37 2015 LENG 104 match states, 104 columns in multiple alignment FILT 101 out of 130 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.3888 -1.0037 SEQ >ss_dssp CCCEEEEEEECSSTTHHHHHHHHHHHHHHHHTTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESSCCCCGGGTTSBEEEECHHHHHHSHHHHHHHHTT CCBC >sa_dssp EEDDABAAAABEEDCDDADDABEDACDBAEECECDCCBBBBCEEDEDEDBDEECBEDBDAAAAABDDEBEBEDAEECDBCDCDADCACEDBDDBADDACE BEEE >ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCCHHHHCCCEEEEEEHHHHHCCHHHHHHHHHH CCCC >ss_conf 9853999950666410479999999999998898899996068899877898899739989999406655566289838982198972079999999970 8789 >Consensus xxkkivaVTACptGIAHTyMAAeaLekaAxxxGxxikVETqGaxGxenxLtxxdIxxAdxVIiAxDxxIdxxRFxgkxvxxxxvxxaIxxxxxlixxalx axvx >c5dleD_ KAEKIVAVTACPVGVAHTYIAAKKIENEAKKQGYSIRVETQGSIGIENALTEEEIKNASVVILAVDKDIDEKRFEGKRVYKVSTVKAINNTENIIKESFN APVF >UniRef50_UPI0001BC918D(2-96:115) phosphotransferase system, fructose-specific IIBC component n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC918D E=2e-06 s/c=0.56 id=27% cov=92% ---KLAIVTACPNGKVSSVLSARLLEAAALRQGWETSVEIIDPNKSDQQLSAQDIEAADLVLVVNTGPVDLSRFVGKRLFQDSPAHALQDVDGFLQRA-- ---- >UniRef50_Q2C2Z8(2-99:277) PTS system, fructose-specific IIBC component n=2 Tax=Gammaproteobacteria RepID=Q2C2Z8_9GAMM E=1e-16 s/c=0.90 id=33% cov=93% ---KISIVTACPSGIATSLIAAGLLEKAADELKWQANIERHTSLKPTNMLTQLQIEQADCIVIAAneNLAIDEQRFVGKRVFRADVAACMENPTAWLQKA V----- >UniRef50_C9XM44(3-96:100) Putative PTS system, IIb component n=4 Tax=Clostridium difficile RepID=C9XM44_CLODC E=5e-05 s/c=0.52 id=26% cov=88% --KKIVAVCE-------SERSLNSLKTAANDLGFDLVYEIQENDNIKNELSIYDIEDASIVLFVTSDSIESiekiDRFIDREFYEVDPKYIIEDAKSIVS EIL----- >UniRef50_C9XQE9(3-104:638) PTS system, IIabc component n=26 Tax=Bacteria RepID=C9XQE9_CLODC E=3e-36 s/c=1.49 id=39% cov=99% -KKMILGVTGCPTGIAHTFMAEEALKNSARELGCDIKVETNGAIGVENKLTAKDIEMADAIIVACDKNVDMDRFNGKPVIEVPVKEGIHKANELIQRCID GKV- >UniRef50_UPI00016A94C8(2-99:136) protein-N p-phosphohistidine-sugar phosphotransferase n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A94C8 E=4e-13 s/c=0.77 id=31% cov=93% --EKLIGLVAAPARTAAPTFAAHALNRAARARGIALALETRSALGVQTPLSADQIGAASVVLIAADDsaSIDEAPFAGKTIHRVSVDDAIRDADAVLARA ------ >UniRef50_A4ITA8(171-272:658) Phosphotransferase system, fructose-specific IIC component n=18 Tax=Bacteria RepID=A4ITA8_GEOTN E=3e-30 s/c=1.29 id=33% cov=97% --KTVLAITACATGIAHTYMAAEALEKAGRELGVRVLTEKQGANGIQDELTADVIAQADGVIFATDIAPKRkERFAGKPYVQTRVAEPLKHAKQIIHKVL HQP-- >UniRef50_UPI00016C007C(2-100:103) PTS system, fructose-like-2 IIB component 1 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C007C E=3e-24 s/c=1.13 id=40% cov=95% ---KIVGVCACPTGVAHTYLAAGKIKKAAEDRGHSCKVEKQGALGFEDQLKTREIREADVVIMALMVGCEMeERFVGKKILKFNISEVLKDIDKVMDKVE EA--- >UniRef50_P32676(4-105:113) Fructose-like phosphotransferase enzyme IIB component 3 n=65 Tax=Enterobacteriaceae RepID=PTFB3_ECOLI E=3e-22 s/c=1.03 id=36% cov=95% ----LVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELaGAERFEHCRYVQCSIYAFLREPQRVMsavR KVLSAP-- >UniRef50_C0BIQ8(2-97:104) Phosphotransferase system PTS fructose-specific IIB subunit n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BIQ8_9BACT E=4e-18 s/c=0.96 id=39% cov=92% ---KIGLITSCLAGVAHSKMAAIALQKEAVKRGYEICIEQQGGHKIPVKLTSDQIKESDIIIIAKMVTISGKnRFENKLILDVSVNKAVRDPKSILDQA- ----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 2648 * * * * 499 * * * * * 2910 * * * * * 1 0 * * * * * * 2456 0 0 A 2 3995 * * * * * 4079 * 1303 * * * * 4160 2913 2167 * * * 4025 2 0 * * * * * * 2979 0 0 E 3 * * * 3346 * * * * 609 * * * 3444 * 2697 * * * * * 3 0 * * * * * * 3599 0 0 K 4 * * * 4793 6068 * * * 508 6014 6094 5097 * * 3525 4830 6137 5991 * 4863 4 0 * * * * * * 4073 0 0 I 5 * * * * 3808 * * 964 * 1953 * * * * * * * 2664 * * 5 0 * * * * * * 4144 0 0 V 6 4495 * * * * 5557 * 2111 * 2975 * * * * * 5393 * 857 * * 6 0 * * * * * * 4144 0 0 A 7 818 4318 * * * 1750 * 4194 * 5557 * * * * * * * 6737 * * 7 0 * * * * * * 4144 0 0 V 8 4773 * * * * * * 1924 * 3747 * * * * * * * 677 * * 8 0 * * * * * * 4144 0 0 T 9 4616 3786 * * * * * * * * * * * * * 5053 285 4798 * * 9 0 * * * * * * 4144 0 0 A 10 503 * * 5062 * 4271 * * 5017 * * 6653 * * * 2540 * * * * 10 44 * 5062 * * * * 4144 0 0 C 11 4725 83 * * * 5767 * * * * * * * * * * * * * * 11 0 * * * * * 0 4059 0 1000 P 12 3418 * * * * * 5755 4998 * 5508 5128 * 526 * * * 3811 4631 * * 12 0 * * * * * 0 4059 0 1000 V 13 2508 * * * * * * * 5767 * 6087 4235 * * * 2867 852 4414 * * 13 0 * * * * * 0 4059 0 1000 G 14 * * * * * 56 * * * * * * * * 4725 * * * * * 14 0 * * * * * 0 4059 0 1000 V 15 * * * * * * * 798 4937 4243 6069 * * * * * 4725 1803 * * 15 0 * * * * * 0 4059 0 1000 A 16 95 * * * * * * * * * * * * * * * 5969 4395 * * 16 0 * * * * * 0 4059 0 1000 H 17 4725 * * * * * 195 * * * * * * 5018 * 4937 5317 * * * 17 0 * * * * 0 * 4059 0 1000 T 18 * 5795 * * * * * * * * * * 4798 * * 2914 298 * * * 18 0 * * * * * * 4144 0 0 Y 19 * * * 5062 2578 * 5814 * 5557 5393 * * 5470 5842 * * 4798 5018 * 660 19 0 * * * * * * 4144 0 0 I 20 * * * * 4791 * * 3750 * 2767 516 * * * 5111 * * 6119 * * 20 0 * * * * * * 4129 0 0 A 21 231 * * * * * * * * * * * * * * 3176 * 4741 * * 21 0 * * * * * * 4129 0 0 A 22 296 * * 5773 * * * * 4527 5111 * * * 3965 5024 * * * * * 22 0 * * * * * * 4129 0 0 K 23 6073 * 3137 773 * 4708 4796 5559 3828 * * 5118 * 4032 5029 * * * * * 23 0 * * * * * * 4132 0 0 K 24 1123 * * * * 6177 * * 2238 3889 * 4689 * 6347 3839 3093 * * * 6717 24 0 * * * * * * 4132 0 0 I 25 * * * * * * * 2934 * 248 6152 * * * * * * 6251 * * 25 0 * * * * * * 4132 0 0 E 26 5211 * 6188 1068 * * * 4795 2562 5768 5993 4590 * 3629 6246 4591 5260 4652 * * 26 0 * * * * * * 4132 0 0 N 27 3531 * 6062 3270 * 6177 * 6020 1274 5870 * 3405 * 3228 3627 6614 5118 6172 * * 27 0 * * * * * * 4132 0 0 E 28 837 * * 3284 6085 4445 * * 5222 4616 5970 * * 6976 * 4904 3586 5523 6614 4770 28 0 * * * * * * 4132 0 0 A 29 413 3804 * * * 2701 * * * 6074 * * * * * 6823 * * * * 29 0 * * * * * * 4132 0 0 K 30 4306 * 4026 2855 * 6721 * * 1388 3957 * 5118 6547 4358 3043 6522 5107 4493 * * 30 0 * * * * * * 4132 0 0 K 31 2518 * 3391 2498 * * * * 1744 6081 * 4794 * 4573 3915 4028 4882 * * * 31 0 * * * * * * 4132 0 0 Q 32 3895 * 7058 6081 6955 * 4861 * 4583 1364 2976 * * 3805 2313 6074 * * * 5444 32 20 6205 * 0 * * * 4132 1000 0 G 33 * * 4859 * * 332 6952 * 4046 * * 3285 * * * * * * * * 33 0 * * * * * * 4132 0 0 Y 34 * 6978 * * 4173 * 2596 2679 * 3588 4424 * * * * * * 2482 2880 2552 34 0 * * * * * * 4151 0 0 S 35 4268 * 2856 2094 5979 5610 6960 * 3175 5868 * 4032 6978 3002 4447 3675 3730 * 6624 * 35 0 * * * * * * 4151 0 0 I 36 3826 4663 * * * * * 1371 * 2683 6103 * 5979 * * * 5042 1801 * * 36 0 * * * * * * 4151 0 0 R 37 4229 5589 5953 * * * 4739 6817 700 6690 * 5402 * 5541 3772 3893 * 5134 * 5377 37 0 * * * * * * 4151 0 0 V 38 * * * * 6998 * * 2202 * 4814 6274 * * * * * 6690 539 * 5134 38 0 * * * * * * 4151 0 0 E 39 * * * 41 * * * * * * * * * 5174 * * * * * * 39 0 * * * * * * 4151 0 0 T 40 6229 * * * * 6534 * 3878 3829 * * * * 4560 4403 * 452 5887 * * 40 0 * * * * * * 4151 0 0 Q 41 * * 7007 * * * 3627 5042 * * * 2970 * 600 3548 * * * 6943 * 41 0 * * * * * * 4151 0 0 G 42 * * 5042 4772 * 224 * * * * * * * * * 4239 5402 * * * 42 11 * 6998 * * * * 4151 0 0 S 43 1286 * * * 6178 4335 * 5724 * * * 5106 5021 4263 5366 1767 3935 6358 * * 43 10 * 7181 * * 0 * 4139 0 1000 I 44 3782 * 3644 5277 * 5730 5572 2922 * 2712 2943 3267 * 5893 6615 3351 4167 3600 * * 44 0 * * * * 0 * 4141 0 1000 G 45 * * 6229 * * 220 * * 3330 * * 5134 * * * * * * * * 45 37 * 5285 * * * * 4151 0 0 I 46 3153 7001 * * 6106 * * 1835 * 5620 * 6145 3687 5546 6112 4435 3191 1874 * 6903 46 0 * * * * 0 * 4133 0 1438 E 47 * * 3704 1014 * 5478 * 5890 2492 * * * 5589 3049 * 4903 5402 6322 * * 47 16 * 6534 * * * * 4151 0 0 N 48 5814 * 3072 * * 4503 5504 * * * * 580 * 5015 * * 4002 5558 * 6187 48 20 * 6164 * * 0 * 4134 0 1000 A 49 4065 * * 2467 * 5585 6957 4173 2819 7203 5387 * 3252 2625 3532 4540 5253 3645 * * 49 0 * * * * 0 * 4147 0 1000 L 50 6624 * * * 4974 * * 2841 * 318 * * 5940 * * * * * * * 50 0 * * * * * * 4151 0 0 T 51 6098 * 4143 6277 * * * * 5437 * * * * 4843 * 1918 753 * * * 51 0 * * * * * * 4152 0 0 E 52 1903 * 3917 3173 * 5846 * 5136 3559 5953 * 6170 2827 3175 6201 3503 5025 6564 * * 52 0 * * * * * * 4152 0 0 E 53 2856 * 2742 1701 * 6740 6607 * 3420 5403 * 7259 * 3331 3989 4431 6163 * * 4681 53 0 * * * * * * 4152 0 0 E 54 5111 * 1077 1834 6230 * * 6871 * 6535 * 6383 * 2784 * * 6999 5724 * * 54 0 * * * * * * 4152 0 0 I 55 5556 * * * 5809 * * 356 * 3873 6770 * * * * * * 3291 * * 55 0 * * * * * * 4152 0 0 K 56 2180 * 3190 2262 * 4815 * * 2852 5293 * 4324 * 3599 3879 4242 * 6913 * * 56 0 * * * * * * 4152 0 0 N 57 2238 * 4147 2296 * 4899 5096 5877 3692 * 6984 3555 * 3563 3454 4006 4653 * * * 57 0 * * * * * * 4152 0 0 A 58 91 * * * * 6920 * 6913 * * * * * * * 5025 6167 * * * 58 0 * * * * * * 4152 0 0 S 59 5024 * 666 4353 * * 6967 * 3184 * * 5784 * * 7037 3453 4305 * * 7902 59 0 * * * * * * 4152 0 0 V 60 2313 3708 * * 4781 2372 5809 3531 6567 2832 6876 * * * * * * 2391 * 4712 60 0 * * * * * * 4152 0 0 V 61 4068 5517 * * * * * 1882 * 6088 * * * * * * * 661 * * 61 0 * * * * * * 4152 0 0 I 62 * * * * 5414 * * 663 * 2388 * * * * * * * 2698 * * 62 0 * * * * * * 4152 0 0 L 63 * * * * 3060 * 6179 1395 * 1774 6133 * * * * * * 2477 * * 63 0 * * * * * * 4152 0 0 A 64 332 * * * * 5390 * 4294 * * * * * * * 4748 6009 3678 * * 64 0 * * * * * * 4152 0 0 V 65 1640 4774 * * * * 3851 3834 5591 6133 * 3458 * * * 2815 3169 3012 * * 65 35 5403 * 1000 1000 * * 4152 1000 0 D 66 5066 * 457 4158 * 5031 * * * * 4836 4315 * * * 4672 5043 * * * 66 0 * * * * * * 4152 0 0 K 67 6989 * 3967 * * 5043 * 2410 2594 3716 * * * 6323 3670 * 3702 1736 * * 67 52 4815 * 1000 1000 * * 4152 1000 0 D 68 2410 * 4090 3096 * 3755 5189 * 3188 6167 * 3587 4283 5377 4940 2989 4270 4571 * * 68 0 * * * * * * 4152 0 0 I 69 * 6133 * * * * * 952 * 4015 * * 4598 * * * 6004 1515 * * 69 384 2097 * 109 3786 * * 4152 3318 0 D 70 6660 * 1241 1945 * 4190 * * 4377 6913 * 3574 5761 4762 * 4136 * * * * 70 132 3514 * 0 * * * 4152 2634 0 E 71 3587 * 4899 2372 * 4396 * 5686 4483 2824 2951 6179 5895 3859 3975 4434 3529 6397 * * 71 199 2958 * 715 1356 * * 4152 3013 0 K 72 3561 * 2270 1541 * 7228 * 6057 4807 * 6635 6375 5741 4661 * 2616 4438 5846 * * 72 75 4307 * 0 * * * 4152 2213 0 R 73 5991 * * * * * * * 5257 * * * 4815 * 160 6042 * 6343 * * 73 12 6954 * 0 * * * 4152 1000 0 F 74 * * * * 48 * * * * 6042 * * * * * * * * * 5809 74 0 * * * * * * 4152 0 0 E 75 2261 * 3339 2588 * 4774 6230 4128 3748 6992 * 3383 * 4850 6049 5246 5823 3000 * 5481 75 0 * * * * * * 4152 0 0 G 76 6990 * 4181 6933 * 495 5063 * * * * 3168 * 6277 6938 4653 5846 * * * 76 40 5184 * 601 1554 * * 4152 1504 0 K 77 4447 4110 * 6954 * * * 4732 524 4513 6567 * * * 4382 6277 * 4981 * 6970 77 30 5580 * 1072 932 * * 4152 1755 0 R 78 7265 * 6179 4480 * * 5963 * 2854 5117 6004 3761 1768 5839 1943 6163 4275 5855 6884 * 78 25 5848 * 1794 491 * * 4152 1483 0 V 79 6742 6207 * * 4160 * * 2265 7402 2125 5043 * 6607 * * * 4631 1479 * 4709 79 0 * * * * * * 4152 0 0 Y 80 6660 * * * 4001 * 4815 2085 6175 2420 * * * * 5876 * 5291 2130 * 2437 80 0 * * * * * * 4152 0 0 K 81 5820 * 3116 2343 5413 * 5142 7076 2546 * 5407 4451 * 2943 2603 5127 6077 5462 * 6740 81 0 * * * * * * 4152 0 0 V 82 3846 3767 5043 7365 5416 6871 * 4338 * 6567 4787 * * * 6160 4703 2193 1247 * * 82 0 * * * * * * 4152 0 0 S 83 5219 6383 3566 4994 * 3110 * * 3619 * * 5179 2753 * 5139 1382 4058 * * * 83 0 * * * * * * 4152 0 0 T 84 5216 * * * * * * 2883 * 4797 6196 * 3434 * * 6870 2091 1145 * * 84 0 * * * * * * 4151 0 0 V 85 2552 * 4453 4578 * 3720 5448 * 2048 * * 3668 * 3932 3855 3066 4644 6151 * 6096 85 0 * * * * * * 4151 0 0 K 86 2966 * 2028 2159 7008 * 5028 6767 3287 5588 * 6128 6111 4887 3420 5651 5238 * * 5078 86 0 * * * * * * 4151 0 0 A 87 934 4928 * * 4288 2981 * 4043 * 4654 * * 3746 * * * * 3456 * * 87 0 * * * * * * 4151 0 0 I 88 * * * * * * * 645 * 2113 4997 * * * * * * 3348 * * 88 0 * * * * * * 4151 0 0 N 89 6743 6179 5072 3993 6604 * 3120 * 1567 5020 * 2828 * 4400 2734 5392 * 6130 * 6152 89 0 * * * * * * 4134 0 0 N 90 6263 * 1917 3336 * 7112 2634 * 2734 * * 2248 * 4933 6131 4929 6154 * * * 90 0 * * * * * * 4134 0 0 T 91 1689 * * * * 4006 * 4943 * * * * 1298 * * 4364 3820 3856 * * 91 0 * * * * * * 4134 0 0 E 92 3678 * 2280 1738 * 4183 6184 5342 2841 * * 6955 6832 3777 * 5384 4284 5797 * * 92 19 6252 * 1585 585 * * 4134 1000 0 N 93 2186 * 5241 2687 * 3314 5998 6741 2616 7034 * 4593 * 3236 6082 3410 6154 4975 * * 93 0 * * * * * * 4134 0 0 I 94 5575 * * 5832 4621 * * 2422 * 1429 5256 * * * * * 5458 1787 5366 * 94 0 * * * * * * 4134 0 0 I 95 * * * * 3372 * * 1138 * 1880 3996 * * * * * * 3313 * 6154 95 52 5096 7347 1585 585 * * 4134 1336 0 K 96 3624 * 2188 2454 * 6792 6633 * 3237 6903 * 3976 6531 2536 4663 4098 4686 * * * 96 0 * * * * 0 * 4123 0 1000 E 97 5185 * 3540 2597 * * * 7169 1912 5914 * * * 2674 2163 * 4261 * * * 97 0 * * * * * * 4087 0 0 S 98 641 6429 * * 5767 6330 * 3442 * * * * * * * 4652 5669 2602 * * 98 16 6486 * 1000 1000 * * 4052 1000 0 F 99 6281 * * 5367 3480 * * 3530 4887 940 5449 * * 5562 5988 6438 * 2758 6326 * 99 161 3242 * 568 1619 * * 3870 2359 0 N 100 2649 * 3111 4475 * * 4882 * 2812 * * 2453 * 3546 4785 2690 6545 4909 * * 100 237 2721 * 831 1191 * * 3628 2315 0 A 101 537 * * 5211 * 2903 * * * * * * * 4464 * 3863 * 4800 * * 101 30 5619 * 1000 1000 * * 3510 1000 0 P 102 4825 * 5150 3766 * 4023 * * 3281 * * * 779 4332 * * 3914 * * * 102 0 * * * * * * 3273 0 0 V 103 * * * * * * * 1293 * * * * * * * * 3382 1012 * * 103 0 * * * * * * 3010 0 0 F 104 * * * * 1821 * 4477 * * * * * * * * * * * * 573 104 0 * * 0 * * * 2791 0 0 //