HHsearch 1.5 NAME c5ctiC_ FAM FILE c5ctiC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5ctiC_.a3m DATE Thu Feb 9 14:01:33 2017 LENG 71 match states, 71 columns in multiple alignment FILT 115 out of 977 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4772 1.5072 SEQ >ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCCC >sa_dssp EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEDECDDEEDEEEDEEBEEEEEEEEEEEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >ss_conf 98889998888899987798997898886799998863599999999999999999999984788876659 >Consensus tGxxGxxGxxGxxGxxGxxGxxGxxGxxGxxGxxGxxgxdxxixqxxxxxxxxxlaxlxxxxxxPxxpxxx >c5ctiC_ SGPPGPPGPPGPPGARGQAGVMGFPGPPGPPGPPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGSI >UniRef50_Q4SNW1(380-446:1071) Chromosome 15 SCAF14542, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SNW1_TETNG E=9e-05 s/c=0.71 id=29% cov=92% -GRNGEPGRSGNYGPQGPQGDRGPPGNNGDKGERGDDVsTDDHDSDGRTRTRREKGEQGARGNRGP------ >UniRef50_Q98TA4(46-119:254) Mannose-binding lectin protein n=5 Tax=Gallus gallus RepID=Q98TA4_CHICK E=0.0004 s/c=0.62 id=34% cov=90% NGLPGRDGRDGPKGEKGDPGEglrglQGLPGKAGPQglkgevGPQGEKGQKGERGIVVTDDLHRQITDLEAKIR-------- >UniRef50_UPI0001AEBD7E(22-87:285) hypothetical protein AmacA2_13399 n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBD7E E=0.0003 s/c=0.70 id=31% cov=94% -GDDGDTGPQGPAGPQGEAGTDGQDGTDGQDGSDGSDGQDG--INGNSAVYTVQITNLTYS--QPFAPAAV >UniRef50_C5J6T1(486-547:924) Putative uncharacterized protein MCJ_004890 n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6T1_MYCCR E=1e-11 s/c=1.14 id=33% cov=89% -GLPGAQGPKGDKGDPGERGATGAQGPKGDKGDPGLSLTWDEAKK--SEVASELLRQLEQSNNSP------ >UniRef50_UPI0001A2C6BE(1081-1147:1359) DNA replication licensing factor MCM7 (CDC47 homolog) (P1.1-MCM3). n=3 Tax=Danio rerio RepID=UPI0001A2C6BE E=2e-11 s/c=1.05 id=36% cov=94% NGPPGPTGDQGPPGAAGPKGEKGERGE-----VQSTASVQAIARQVCEQLIQSHMARYSSILNHiPSQPVSI >UniRef50_Q9BXJ1(97-156:281) Complement C1q tumor necrosis factor-related protein 1 n=24 Tax=Chordata RepID=C1QT1_HUMAN E=0.0008 s/c=0.74 id=30% cov=86% --LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERC----KSHYAAFSVGRKKPM----- >UniRef50_UPI0000F304CC(121-183:315) PREDICTED: similar to 43kDa collectin isoform 1 n=1 Tax=Bos taurus RepID=UPI0000F304CC E=1e-05 s/c=0.81 id=30% cov=90% -GERGTPGPGGAIGPQGPSGAMGPPGLKGDRGDPGEKGAKGETSVLEVDTLRQRMRNLEGEVQR------- >UniRef50_D0YQ66(144-195:562) RCC1 repeat-containing protein (Fragment) n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YQ66_9ACTO E=7e-07 s/c=1.06 id=34% cov=75% --PRGEKGEQGEKGDPGQKGERGEKGEPGV-------VDTQQIQKRILSVLSRRFTQIAAS---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 2017 * * * * * * * * * * 3107 * * * 2386 1166 * * * 1 0 * * * * * * 4159 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 4780 0 0 P 3 3893 * 3893 2832 6710 6984 5170 5390 3864 3557 5083 5851 2208 4311 5373 3917 6005 3777 * 6660 3 0 * * * * * * 4780 0 0 P 4 4713 * 5036 5278 * * 6700 5423 2628 * 4841 5220 1715 2611 2992 6602 * 4478 * * 4 0 * * * * * * 4788 0 0 G 5 * * 4782 * * 53 * * * * * * * * * * * * * * 5 0 * * * * * * 5032 0 0 P 6 4795 * 4355 2616 6886 * 5852 4345 4077 4220 5093 3882 2455 4194 5500 4603 3629 4240 * 4926 6 0 * * * * * * 5032 0 0 P 7 5142 * 4625 4759 * * * 5339 2894 6452 5145 5245 1479 2672 3944 4803 4704 6148 * * 7 17 6406 * 1186 835 * * 5032 1361 0 G 8 * * * * * 35 * * * * * * * * * 5389 * * * * 8 0 * * * * * * 5035 0 0 P 9 4796 * 3416 3650 6742 7024 5826 4429 4294 3372 6542 5047 2358 4955 4111 3117 3739 4787 * 6738 9 0 * * * * * * 5031 0 0 P 10 4703 * 3922 5617 * 6965 * 4847 3467 5530 5936 * 1592 2943 3060 5031 3735 5908 * * 10 9 7257 * 1585 585 * * 5032 1000 0 G 11 * * 4785 * * 146 * * * * * 4442 * * * 6139 * * * * 11 39 5213 * 3700 115 * * 5032 1000 0 P 12 4584 * 3467 3589 5466 6881 * 3139 4194 2915 * 4030 2430 5892 5983 3622 5694 4154 * 5893 12 0 * * * * * * 5032 0 0 P 13 5085 * 4267 5846 * * 5732 5451 3617 * 4613 * 1347 3671 2796 5557 4011 5623 * 5786 13 0 * * * * * * 5030 0 0 G 14 * * * * * 30 * * * * * * * * * * 5594 * * * 14 0 * * * * * * 5030 0 0 A 15 4172 6062 3810 4450 5149 * 5847 3376 4222 3336 5584 4935 2395 4041 3791 3876 5563 5405 6751 5703 15 0 * * * * * * 5030 0 0 R 16 4171 * 6288 5026 * * 6464 6987 2523 4942 6702 5298 1594 2786 3351 6052 5494 5128 * * 16 0 * * * * * * 5030 0 0 G 17 * * * * * 68 * * * * * 4442 * * * * * * * * 17 0 * * * * * * 5030 0 0 Q 18 4055 * 3766 2454 6636 6634 * 4876 3824 3612 6973 6738 2787 2532 4870 5992 7136 3736 * 6638 18 8 7536 * 3907 100 * * 5030 1000 0 A 19 4913 6702 4343 4756 * * * 6010 2561 6811 6108 5966 1427 3560 3268 5442 4422 7002 * 6864 19 0 * * * * * * 5030 0 0 G 20 * * * * * 76 * * * * * * * * * 4284 * * * * 20 0 * * * * * * 5030 0 0 V 21 3965 * 3291 2631 6857 * 6070 4634 3260 3304 * 6094 2745 4289 4436 6973 3867 5534 * 4519 21 8 7517 * 2322 322 * * 5030 1000 0 M 22 4709 6844 3584 5446 6085 * 6648 5028 3898 5600 5680 5350 1648 3522 2949 5165 4661 4140 * * 22 9 7270 * 2000 415 * * 5030 1000 0 G 23 * * * * * 124 * * * * * 3604 * * * * * * * * 23 10 7177 * 4170 82 * * 5030 1000 0 F 24 3466 6707 4283 2998 7320 * * 4670 4689 3264 6550 5636 2683 3565 3898 5056 4731 3123 * 6121 24 0 * * * * * * 5030 0 0 P 25 4318 * 3547 5959 * * * * 3646 5645 7183 4339 1326 3828 3170 5394 3667 6751 * * 25 0 * * * * * * 5030 0 0 G 26 * * 4751 * * 55 * * * * * * * * * * * * * * 26 0 * * * * * * 5030 0 0 P 27 3568 * 4506 2949 5481 * 5837 4019 4678 3643 6068 5268 2804 3201 3924 4815 6755 3081 * * 27 21 * 6095 * * * * 5030 0 0 P 28 5037 * 3422 5388 * * * * 2984 * 4762 4824 1391 3919 3254 4069 5348 6975 6701 * 28 0 * * * * * 0 5028 0 1265 G 29 * * * * * 97 * * * * * 4442 * * * 5726 * * * * 29 0 * * * * * 0 5028 0 1265 P 30 3989 * 3717 2290 4495 * 6859 6988 5322 3523 5883 4555 2873 3371 5370 5576 5587 3120 * 6628 30 16 7049 8085 2322 322 * 0 5028 1000 1265 P 31 4656 * 4695 4689 * * * 5976 2200 6453 5989 4920 1956 2789 3160 6639 4339 6007 * * 31 8 7485 * 2585 263 * 0 5032 1000 1714 G 32 * * * * * 96 * * 5206 * * * 4748 * * * * * * * 32 21 6125 * 0 * 724 1341 5032 1000 1714 P 33 4666 * 3948 2050 4800 5208 7135 5083 5913 3253 * 5515 2502 4852 3917 4572 4093 4902 * * 33 21 6975 7341 4170 82 * 0 5028 1000 1000 P 34 4384 * 5116 5427 * * 6820 7218 2677 * 5946 5560 1255 3758 3677 5170 4143 4835 * * 34 0 * * * * 812 1217 5029 0 1464 G 35 * * * * * 103 * * * * * * * 5857 * 5367 5191 * * * 35 60 5990 5328 2132 374 * 0 4989 1552 1000 K 36 5301 * 3687 3048 6592 * * 4782 3208 6920 * * 3411 2163 2401 3841 5199 6746 * * 36 34 6533 6322 0 * 903 1104 4966 1000 1965 E 37 3382 * 3069 3114 * 4348 * * 2864 6037 * 4068 3472 5997 * 2454 3160 6976 * * 37 20 6155 * 1585 585 514 1739 4959 1000 1720 A 38 3767 * * * 3912 1004 * 6112 * 3679 4256 5741 3371 6045 * 5236 * 5004 * 5130 38 21 6140 * 0 * * 0 5047 1000 1000 S 39 3963 * 3297 4182 * 5837 * * 3579 4857 * 6206 * 3888 6125 2741 1684 3520 * * 39 25 5840 * 0 * * 0 4973 1000 1000 E 40 4474 * 1284 2660 * 5861 5674 4572 4324 6022 6025 5813 5083 5025 4479 5986 5034 6302 6183 5014 40 30 5591 * 2000 415 * 0 4948 1000 1000 Q 41 3330 * 3736 5343 * 2076 * * * * * 3955 * 2010 5700 2452 * 4870 * 6081 41 31 * 5535 * * * 0 4987 0 1000 R 42 4052 * 4218 1764 4456 * 3611 5522 * 4579 5553 * 5488 4445 3684 3331 * 3771 * 4044 42 24 5916 * 0 * * 0 4944 1000 1529 I 43 3046 5568 5339 * 4417 * * 1586 * 3882 5100 * 4687 * 4498 * 3950 2262 * * 43 38 * 5283 * * 851 1167 4899 0 1529 R 44 5235 * * 5014 5318 3615 * 3475 3360 4263 * 5709 * 4128 1591 3213 5375 * 5125 5191 44 0 * * * * * 0 4921 0 1473 E 45 * * 3185 2647 * 5235 5096 5360 2486 * * 4911 * 1276 * * * 5294 * * 45 38 * 5258 * * 851 1167 4971 0 1473 L 46 4096 * * 4165 5169 3837 * 2593 5173 2080 * * * 4985 3917 5056 * 2299 * 5214 46 45 * 5034 * * 1222 807 4956 0 1442 C 47 3094 1305 * 3793 * * * 3282 * 4803 * 4583 * 4034 4850 * 4966 3943 * 4921 47 52 * 4828 * * 0 * 4983 0 1468 G 48 3894 * 5320 2594 4913 5185 * 4942 * 3198 4153 * * * 3109 2922 2280 5059 * * 48 0 * * * * * 0 4962 0 1000 G 49 3270 * 2601 2477 * 5185 * * 4993 * * * 5320 3050 3131 2350 * * 4759 * 49 0 * * * * * 0 4962 0 1000 M 50 3406 * 4779 3795 4916 * * 3280 4732 2491 5153 * * * * * 3415 1627 * * 50 0 * * * * * 0 4910 0 1000 I 51 3960 5296 * * * * 4634 1949 * 1862 4978 * * 4727 3743 * 4916 3096 * 4584 51 0 * * * * 0 * 4910 0 1000 S 52 * * * * * * 4853 * 4962 * * * * 1745 1665 2228 3762 4942 * * 52 0 * * * * * * 4956 0 0 E 53 3896 * 3707 1560 * 4754 * * * * * 4671 * 3813 3498 2579 3856 4488 * * 53 0 * * * * * * 4939 0 0 Q 54 * * * * * * 1770 * 2676 3848 * * * 1939 3014 4572 * 4200 * * 54 0 * * * * * * 4939 0 0 I 55 * * * * 3621 4444 * 3067 4646 1476 2264 * * * * * * 3756 * 3802 55 0 * * * * * * 4940 0 0 A 56 1223 * * 4381 * * * * * * 4961 3187 3606 * 3697 4669 2449 * * * 56 0 * * * * * * 4889 0 0 Q 57 3601 * 4444 2595 * * * * 3123 * * 3426 * 1514 3256 * * 4526 * * 57 0 * * * * * * 4778 0 0 L 58 * * * * 4311 4053 * 3110 * 706 4588 * * * * * * * * 3072 58 83 * 4160 * * * * 4569 0 0 A 59 1964 * 4124 2440 * * * * * 4102 * * * 4109 * 2166 2618 * * * 59 0 * * * * * 0 4495 0 1000 A 60 1333 * * 4251 * 3988 * * * * * * * 3112 3786 3242 4124 3939 * 3814 60 0 * * * * 0 * 4495 0 1000 H 61 * * * 4081 * 2938 4382 2922 4055 * * * * * 4322 1278 4217 4206 * * 61 107 * 3809 * * * * 4595 0 0 L 62 * * * * * 3933 * 2833 * 1360 4146 2763 * * 3813 * * 2945 * * 62 0 * * * * * 0 4299 0 1000 R 63 * * * 3922 * 4029 * 3954 2986 * * 2241 * 2375 1849 * * * * * 63 0 * * * * 0 * 4299 0 1000 K 64 * * * 3933 * 2721 4202 * 2831 * * * * 2466 2346 2844 3816 * * * 64 107 3810 * 0 * * * 4303 1000 0 P 65 * * * * * * * * * * * * 0 * * * * * * * 65 0 * * * * * * 3865 0 0 L 66 * * * * 2260 * * * * 2367 2319 * 2318 * * 2348 * * * * 66 0 * * * * * * 2760 0 0 A 67 1011 * * * * 1958 * * * * * * * 2022 * * * * * * 67 0 * * * * * * 2361 0 0 P 68 * * * * * * * * * * * * 0 * * * * * * * 68 0 * * * * * * 2361 0 0 G 69 1549 * * * * 1564 * * * * * * * * * * * 1643 * * 69 0 * * * * * * 2006 0 0 S 70 1549 * * * * * * * * * * * * * * 603 * * * * 70 0 * * * * * * 2006 0 0 I 71 * * * * * * * 603 * * * * * * * * * 1549 * * 71 0 * * 0 * * * 2006 0 0 //