HHsearch 1.5 NAME c5bw0D_ FAM FILE c5bw0D_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5bw0D_.a3m DATE Sat Jul 23 08:20:25 2016 LENG 84 match states, 84 columns in multiple alignment FILT 101 out of 105 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.3 EVD 0.5071 1.6992 SEQ >ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHCSSCCCSEEEEEEEEETTEEEEEEEEEEECCEEEEEEEEECCCCCHHHHCSEEEEEEEC >sa_dssp EDDDCEDCEDCACEAADDCBDDBDEDEEECEDCEDECDCECEECDABBCBCACEEECDABABAACDEEDDBCECCCBDCDBDBE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECC >ss_conf 988899999999999867999984300168864332227758866999999865598646999999827887744799999529 >Consensus xnaxxLxxrtxAxwVAxNxlaelrlxxxxpxxgxxxgxxxxagrxWxwxxxvxxTxxxxxxxVxvxVxxxxxxxxxaxlxxxvG >c5bw0D_ QNASRLEDKTLAMWIADNRLNELQLEQTPPSSGRNQGELEFAGRRWEWRTQVDSTMRRVIVWVAAKPRGSIEERAAARLVGFLG >UniRef50_A0YG38(40-126:132) General secretion pathway protein I n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG38_9GAMM E=5e-07 s/c=0.64 id=25% cov=100% DNTAYLRDQTIAHWVALNQLELVYLENQYTNkviSEPRAGSEIMANRDWHWTINPINTANKNFLQLDVSVRAkEDDESPIVTVTGMV- >UniRef50_A0YBE7(60-145:147) Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE7_9GAMM E=5e-11 s/c=0.80 id=25% cov=96% ----QLQLQTTAIIVAENQMAVVQISPNWPSLGLKTNRVTLADAQWLVQTDVSTTSDPWLRKVEVTVNYGDaldrreTPAILARLVSYRG >UniRef50_C7HZE6(76-158:160) General secretion pathway protein I n=1 Tax=Thiomonas intermedia K12 RepID=C7HZE6_THIIN E=3e-09 s/c=0.76 id=23% cov=100% DNAQRYRMTVLAEQCAQNFLVDQRLSKTFLSVGQSTSACTQANVPFTVAVDVMPTPNPNFRRVQVNV-LDASGWSAWQVVTIIG >UniRef50_Q3ILN5(37-120:125) Putative general secretion pathway protein I [precursor] n=3 Tax=Alteromonadales RepID=Q3ILN5_PSEHT E=4e-15 s/c=0.98 id=23% cov=96% ---SSIEEQTYASWVAENIMVEQRTkGEQWEGKDGVRGSEVMAGVEWFWRQDIGKTADKDFVKLTINIFSDEKyEHSVYELATYL- >UniRef50_B4RFJ2(37-118:120) Type II secretion system protein I n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFJ2_PHEZH E=1e-08 s/c=0.75 id=25% cov=99% RTAGALEQRFFASVVAENRAVEALTAPAPPALGEERGADRAGRETWRWTRRVSA-AGEGMLRVDVRVAGPGD-RTAGEVTAFRG >UniRef50_Q4KD25(38-120:128) General secretion pathway protein I n=9 Tax=Pseudomonas RepID=Q4KD25_PSEF5 E=2e-06 s/c=0.65 id=25% cov=99% QSNGLLRDKSLALLAAQSRVAEVRLEGR-LNSGVKNLDCDQGRLKLRCETRIAPGSAPGLVRVQVQVSDrSREAPPLARLETLV- >UniRef50_C4T0X6(25-96:110) Type II secretory pathway, pseudopilin PulG n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T0X6_YERIN E=3e-08 s/c=0.83 id=22% cov=82% --TRSLQDKMASAWVAENVLAELKITGAMQTENWLKGSDFMFDQFWYWQVKEIYHQSKGIREVIVEIRSQ-------------- >UniRef50_Q0C122(35-117:124) General secretion pathway protein I n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C122_HYPNA E=1e-06 s/c=0.65 id=21% cov=98% --SAQLGDRTLARLVAENIAVSTVTDAQLQVVGRTAGEASQRRQTFEWERTITPAQRADLIQISIRVKLKGEEESILSELTLL- >UniRef50_Q5WWY8(39-121:125) Type II secretory pathway protein LspI n=6 Tax=Legionella pneumophila RepID=Q5WWY8_LEGPL E=2e-12 s/c=0.89 id=19% cov=99% DNTHRIKEKTISHWVAMQGIAMIQLNlLRTSQSQESTQATTMLGQKWYWRAKISPTPIKRMQQITISVSSKQAGPFREELIAF-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * 1646 3536 * * * * * * * * * 1820 1684 * * * * * 1 0 * * * * * * 5291 0 0 N 2 * * * * * * 5164 * * * * 709 * * * 2028 3118 * * * 2 0 * * * * * * 5673 0 0 A 3 1398 * * * * * 5843 5690 * 3210 * 5024 * 4202 * 3226 1919 5693 * * 3 0 * * * * * * 6213 0 0 S 4 1717 * 4545 4374 5978 3043 5814 5920 5647 * * * * 3762 3218 2434 5601 5243 * * 4 0 * * * * * * 6261 0 0 R 5 3541 * 4226 5921 * 3761 4248 5387 * 5061 * 4146 * 3301 2259 4236 5315 5606 * 2335 5 0 * * * * * * 6287 0 0 L 6 4767 * * * * * * 2546 * 575 4032 * * 5531 * * 6149 6695 * 6124 6 0 * * * * * * 6330 0 0 E 7 6110 * 4769 1317 * 6129 5837 5382 3805 * * 6766 * 3490 1901 6544 4527 * * * 7 0 * * * * * * 6329 0 0 D 8 5405 * 1838 1651 * * * * 5345 3965 5447 4172 * 3725 4282 5104 5485 4930 * * 8 0 * * * * * * 6329 0 0 K 9 6178 * 6218 * * * 5787 6520 1511 * 6429 * * 3625 1294 6489 4661 4585 * * 9 0 * * * * * * 6343 0 0 T 10 4575 * * * 6840 * * 4075 * 3682 3168 6237 * 5276 * 3432 998 3873 * * 10 0 * * * * * * 6343 0 0 L 11 4790 * * * 2510 * 5472 3229 5396 1569 5630 * * 3984 * * 5468 2796 * 4368 11 0 * * * * * * 6343 0 0 A 12 124 * * * * 5523 * * * * * * * * 6290 4381 * * * * 12 0 * * * * * * 6343 0 0 M 13 3801 * * 4027 * 3024 2958 5468 * 4175 5938 5035 * 2805 4653 2362 4415 5462 * 4523 13 0 * * * * * * 6343 0 0 W 14 * * * * 4872 * * 3510 * 3297 5341 6396 * 6239 * * * 4261 650 4754 14 0 * * * * * * 6343 0 0 I 15 5279 4422 * 6002 * * * 2501 * 5132 * * * * * 3891 * 645 * * 15 0 * * * * * * 6351 0 0 A 16 98 * * * * 6552 * * * 6312 * 5930 * * * * * 5276 * * 16 0 * * * * * * 6351 0 0 D 17 5024 * 2097 1932 * * 6996 * 6469 6501 3574 6526 * 2062 6367 3837 5221 * * * 17 0 * * * * * * 6351 0 0 N 18 * * 4142 * * * * * * * * 144 * 5387 * 6137 * * * * 18 0 * * * * * * 6351 0 0 R 19 3869 * * 3291 5540 4940 5199 3838 3891 3970 6299 * * 2127 2047 * 6469 4264 * * 19 0 * * * * * * 6351 0 0 L 20 3059 6294 * * * * * 4331 * 714 2975 * * 6837 * * 6764 4447 * 5878 20 0 * * * * * * 6351 0 0 N 21 1354 * * 4931 * 4728 * 4762 * * * 3569 * * * 4019 2600 2391 * * 21 0 * * * * * * 6351 0 0 E 22 4645 * 3834 1115 6469 * * * * 3613 3937 * * 3171 3319 6163 * 4962 * 6306 22 0 * * * * * * 6351 0 0 L 23 3748 * * * 4295 * 6428 2488 * 1355 3873 * * 4655 * 6184 5404 2858 * 6552 23 32 5524 * 2000 415 * * 6351 1179 0 Q 24 5248 * * 6312 * * 7220 * 3250 4556 5212 5183 * 2034 1346 6491 5692 4862 5838 4945 24 0 * * * * * * 6351 0 0 L 25 3867 * * * 6753 * * 2578 * 755 7844 * * 6139 * 5772 3706 4356 * * 25 90 4302 6641 1377 701 * * 6351 2409 0 E 26 2641 * 3406 2880 * 3639 * * 4522 4995 5493 3964 6025 3572 4039 3318 3537 6663 * 6434 26 52 4807 * 0 * * 0 6346 1853 1000 Q 27 4012 * 3746 3843 * 3516 4767 * 2934 5009 4777 4176 2855 3472 3607 4536 5007 4995 * * 27 45 6299 5789 0 * 0 * 6346 1000 1000 T 28 2685 * 6391 3040 * 4887 * 5498 5322 5418 5319 3436 * 2406 3617 4156 3129 4360 * * 28 47 6928 5386 3170 170 1019 981 6346 1000 1651 P 29 4852 * 6367 4547 3174 5070 * 6204 5760 3398 4819 * 2685 5701 * 6169 4094 6083 1798 4106 29 0 * * * * 561 1633 6333 0 2376 P 30 4872 * * 6637 6091 4911 * * 6247 2647 * 6303 920 2823 6545 6460 6486 6632 6741 * 30 37 5988 6715 1022 979 0 * 6352 1714 1000 S 31 3077 * 4320 3372 * 2901 * 5830 6644 5652 * 4577 3216 4023 4606 2198 3850 6145 * * 31 82 4995 5401 1585 585 0 * 6352 2088 1000 S 32 3505 * 5137 4044 * 6157 * 3003 3128 2909 6252 5072 3587 * 5216 3285 4273 3125 * 6087 32 45 * 5028 * * 0 * 6295 0 1134 G 33 4715 * 4711 3795 6592 908 * 5129 * 6309 * 4927 * 4118 4456 3749 4937 5364 * * 33 36 * 5353 * * 505 1759 6344 0 2118 R 34 5226 * 4427 2113 * 6613 * 6400 3721 4808 * 3836 3962 4035 3225 5009 3912 5026 2924 * 34 0 * * * * 966 1035 6352 0 2252 N 35 3445 * 6644 3930 * 6287 4734 * 2590 3995 * 4091 * 2633 3449 2985 4727 4027 * 5922 35 0 * * * * * 0 6343 0 1460 Q 36 4344 * 3893 2916 * 6650 6811 * 3291 5633 6522 4155 * 3189 3671 2400 2688 6644 * * 36 0 * * * * * 0 6343 0 1460 G 37 * * 5014 4708 4244 787 * 6486 4199 5320 * 5466 * 4085 5905 3868 6817 6552 * 5523 37 0 * * * * 962 1039 6343 0 1460 E 38 3357 * 3609 1914 * 5686 * * 4291 * * 6341 6413 3111 4952 2805 3000 4980 * 6278 38 19 * 6257 * * 0 * 6350 0 1000 L 39 3852 2950 4504 2792 * 6351 * 4152 * 5318 7000 * * 6519 * 3610 3363 1690 * 6434 39 0 * * * * 0 * 6327 0 1000 E 40 4606 * 4320 1958 4867 * * 5843 4942 6478 4373 5710 4271 4776 3356 4243 2423 3979 * * 40 0 * * * * * * 6350 0 0 F 41 5173 * * 6329 3006 * * 4884 * 2870 1590 4792 * 2344 6435 5416 * 6307 * 4268 41 0 * * * * * * 6350 0 0 A 42 1135 * 6329 * 6248 1786 * 5566 * 3613 5625 4618 * 4890 6157 * * 5837 * * 42 0 * * * * * * 6350 0 0 G 43 * * 2849 4090 * 892 * * 5361 * * 2572 * * 4212 5875 * * * * 43 0 * * * * * * 6350 0 0 R 44 5476 * * 4097 5098 * * 5407 4209 3988 5495 * * 2910 1162 5225 5686 3641 * 5590 44 0 * * * * * * 6350 0 0 R 45 6802 * 2669 2915 6248 * 6312 4958 4832 3976 * 4578 4256 4465 2855 3365 2760 5496 * * 45 0 * * * * * * 6350 0 0 W 46 * * * * 3442 * * * * 4309 5804 * * * * * * * 324 4607 46 0 * * * * * * 6350 0 0 E 47 5756 * 4775 4140 3731 * 4447 6416 * 4186 * 6122 6421 3197 2492 5511 4638 4631 6435 1870 47 0 * * * * * * 6350 0 0 W 48 * 3610 * * * 6301 * 3988 * 5655 * * * * * 5548 6116 2649 703 6254 48 37 5297 * 1658 550 * * 6350 1618 0 R 49 3958 * 4297 2885 * 6826 * 5892 4512 * * 6435 * 2981 1780 5303 2618 5411 4687 * 49 0 * * * * * * 6350 0 0 T 50 3881 6349 * 4257 * * * 3274 4174 4194 4062 * * 2898 3157 3738 3301 2928 5435 5867 50 0 * * * * * * 6351 0 0 Q 51 5228 * 3501 2782 * * * * 2593 5485 * 6493 * 3108 2832 3867 2771 3859 * * 51 47 5608 6475 2926 204 * * 6351 1698 0 V 52 4824 * * 4477 * 3812 * 2819 * 5347 * * 4069 5628 4904 3864 5544 1062 * * 52 84 4410 6680 2000 415 * 0 6334 2276 1000 D 53 3656 * 3727 3910 * 6571 7255 2506 4862 5668 5477 * * 4350 3575 2312 3584 3452 * * 53 18 6307 * 1000 1000 979 1022 6325 1000 1643 S 54 2312 * 4483 3298 * 5152 * * 2843 6341 * 4126 2231 4799 5143 4062 5069 5484 * 5272 54 56 5654 5765 1845 471 0 * 6320 1643 1000 T 55 4500 * 6541 5539 * 4215 6147 * * 5117 * 6395 * * 4615 5331 501 5052 6310 * 55 14 6678 * 2000 415 1000 1000 6326 1000 1703 M 56 2692 * 3660 3458 * 4479 * 4016 6409 3585 4586 5695 1941 4063 * 4613 4842 5923 * * 56 15 * 6623 * * 0 * 6325 0 1000 R 57 5240 * 1950 5363 * 5565 * 4518 5511 5813 4603 2123 * 5673 3228 4157 5002 3476 * 6409 57 19 * 6252 * * 0 * 6363 0 1000 R 58 3810 * 3791 4790 6355 5629 * * 2656 6739 * 4772 1341 6962 2895 5351 6789 6333 * * 58 0 * * * * 0 * 6327 0 1000 V 59 4718 * 3231 4317 6356 2832 6261 4941 5039 2700 * 2854 * 4700 4009 4472 4738 3460 6559 * 59 25 5840 * 2000 415 * * 6330 1000 0 I 60 * * 6402 4411 1868 6235 * 3520 * 1854 3223 * * * 6356 6330 4770 3039 * * 60 22 * 6021 * * * * 6330 0 0 V 61 6511 * * 5328 6957 * * 4071 4097 3629 6435 5402 * 3032 1404 5608 * 2593 * 4815 61 15 6591 * 3170 170 0 * 6284 1000 1000 W 62 2635 * * 4021 * * 5818 5407 3368 * 5176 * * 2918 1425 4703 4726 5500 6876 * 62 0 * * * * * * 6304 0 0 V 63 4331 * 6016 * 6533 * * 2022 * 3278 * * * * * * * 833 * 6217 63 0 * * * * * * 6304 0 0 A 64 4139 * 1689 2168 6395 * 6277 5486 5264 5487 * 4491 * 4547 4635 3808 3457 5305 * * 64 18 6317 * 0 * * * 6304 1000 0 A 65 4109 * * * * * * 1718 6392 3323 5085 * * * 6277 6311 6330 1253 * 4673 65 0 * * * * * * 6304 0 0 K 66 3356 * 3873 2440 * 4729 5818 6813 5082 4705 * 5310 * 2802 3393 2490 4844 5577 6954 6392 66 0 * * * * * * 6304 0 0 P 67 5818 * 5467 4741 * * * 4228 * * * * 5570 6277 6395 6392 6547 321 * * 67 189 3999 4052 1591 582 * * 6304 3183 0 R 68 2761 * 4886 5809 3080 4407 * * 5206 5010 * 4720 * 6207 1934 2687 4184 * * 4213 68 92 4222 6891 581 1592 784 1253 6407 2859 2924 G 69 3077 * 3870 4640 * 2652 4848 * 6408 2747 5393 4504 2948 4765 5311 3412 4512 * * 5560 69 82 4581 6240 0 * 575 1605 6525 2250 2219 S 70 4003 * 2417 2639 * 3966 * 6124 3485 * 6097 3692 3246 3683 * 3385 5376 5197 * * 70 29 5639 * 0 * 981 1019 6523 1687 1578 I 71 2762 * 3468 3307 6150 2785 * 4901 3682 5569 * * 3770 3648 3692 3864 4400 5437 * * 71 75 5440 5188 2007 413 * 0 6413 1543 1000 E 72 4350 * 2375 1805 * 3256 * * 3973 * * 4726 5660 4167 3475 4027 4673 * * * 72 185 3436 5163 221 2818 1614 571 6393 3196 2142 E 73 3246 * 2740 2136 6075 3464 5971 * 5030 * * 5310 2898 5288 4867 3097 6685 * * 5669 73 77 4266 * 329 2292 874 1138 6371 2580 2607 R 74 3416 * 3690 4563 5461 4274 3368 * 4512 4744 * 5235 4596 3479 2786 3675 3435 6033 5851 5146 74 34 5421 * 473 1839 * 0 6345 1636 1524 A 75 3228 * 6186 6005 5438 4986 6084 4207 * 5721 * 6335 2584 3471 4941 2353 3838 2964 5951 6691 75 62 4576 * 1104 903 * 0 6345 2193 1524 A 76 2934 * * * * * * 3371 * 1419 6157 * 6091 5630 4689 4610 5329 2228 6159 5822 76 49 4894 * 0 * 962 1040 6228 1738 1524 A 77 962 * 5551 5435 5346 6140 3304 5364 * 3308 * * * * * 6373 5408 3886 5825 4160 77 22 6062 * 0 * 0 * 6246 1000 1000 R 78 * * * 3003 6362 6030 5269 4745 * 4096 * * * 4010 2581 2171 2306 4439 6233 6250 78 0 * * * * * * 6259 0 0 L 79 * * * 5596 6628 * * 3966 * 733 3892 * * * * * 6059 2177 * * 79 0 * * * * * * 6218 0 0 V 80 3227 * 5068 5723 * * * 3951 5172 4709 * * * * 3009 3250 2417 1861 5519 * 80 0 * * * * * * 6190 0 0 G 81 2431 * * * * 1707 * 5885 * * * * * 6011 * 2409 1798 * * * 81 0 * * * * * * 6154 0 0 F 82 * * * * 1311 * * 3994 * 2978 5875 * * * * * * 3582 * 1705 82 0 * * * * * * 6154 0 0 L 83 * * * * * * * 1827 * 1881 * * * * 4215 * * 1348 * * 83 0 * * * * * * 5932 0 0 G 84 * * * * * 0 * * * * * * * * * * * * * * 84 0 * * 0 * * * 4453 0 0 //