HHsearch 1.5 NAME c5b83C_ FAM FILE c5b83C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5b83C_.a3m DATE Thu Feb 9 11:02:11 2017 LENG 61 match states, 61 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4502 0.6476 SEQ >ss_dssp CCTHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC >sa_dssp EEEEEEDEEDEEDEEDDEEEEDDEEDEDDEDEDEDDDEEEEDDDEEEEEEEEDDEEEEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9468999999952566789999999999878999999999999999999999999973069 >Consensus DxlkxxixqxxxdlEtipVlxaQaevYxsDFxAERxAREkihxekexLxxQlxxxxxendx >c5b83C_ DEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDA >UniRef50_Q5M7B7(400-457:532) Optineurin n=4 Tax=Xenopus RepID=OPTN_XENLA E=1e-13 s/c=1.34 id=61% cov=97% DEMREMDTKHEEDKETIELLRAQVDVYCADFHAERSARENIHQEKEQLATRLAYMIQE--- >UniRef50_Q4SSU6(405-463:537) Chromosome undetermined SCAF14347, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SSU6_TETNG E=6e-14 s/c=1.33 id=60% cov=98% DQMKQEIFQKEKDLETISVFQAQAEVYSSDFYAERAAREKLHEERERLATQLEYVKKQN-- >UniRef50_B5X3H2(431-489:571) Optineurin n=1 Tax=Salmo salar RepID=B5X3H2_SALSA E=6e-11 s/c=1.16 id=60% cov=98% DVMKQQIYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEKERLSAQLEFVKKQN-- >UniRef50_A5WUP9(179-237:314) Novel protein similar to H.sapiens OPTN, optineurin (OPTN, zgc:77868) (Fragment) n=4 Tax=Clupeocephala RepID=A5WUP9_DANRE E=1e-10 s/c=1.14 id=60% cov=98% DEMKMELFQKEKDLETISVFQAQAEIYSSDFYAERAAREKIHEEKERLATQLEYVKKQN-- >UniRef50_B0K002(378-435:506) LOC100145270 protein n=3 Tax=Tetrapoda RepID=B0K002_XENTR E=7e-09 s/c=1.06 id=51% cov=97% DKLKDEAEKQRTELDTVPVLKAQVEIYRADFLAERKAREELHAEKERLQEQLNVLLQE--- >UniRef50_UPI000186D7F5(448-502:573) Optineurin, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D7F5 E=0.0001 s/c=0.87 id=41% cov=92% EKLKESIANLNLECEKIPVLKVQAELYESDFKDEREAREKLVGEKEKMAEQIRIL------ >UniRef50_UPI000192507E(871-929:1048) PREDICTED: similar to IkappaB kinase gamma n=2 Tax=Hydra magnipapillata RepID=UPI000192507E E=4e-12 s/c=1.23 id=38% cov=98% DALNVTIQKMSAEVDSIPVYQTQMDAYENDFRAERAAREKIHQDLCRINEQLDEHILEN-- >UniRef50_C3YPU4(680-737:873) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YPU4_BRAFL E=9e-10 s/c=1.12 id=37% cov=97% -RLTQEISQMRKDMEEVPVLKAQADVFRQDFEAEREARQKAHGDMQTLEQQNQELQLEN-- >UniRef50_Q001C7(344-403:491) NF-KB essential modulating protein (Fragment) n=2 Tax=Percomorpha RepID=Q001C7_GASAC E=6e-08 s/c=0.98 id=44% cov=100% DKLKEEVEQQKGSLETVPVLTAQAEIYKADFLAEREAREKLNQKKEDLQDQLTQAIAEID- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 240 2709 * * * * * * * * * * * * * * * * 1 0 * * * * * * 2429 0 0 E 2 2911 * * 1922 * * * * 1613 * * * * 3873 2912 * * 3734 * * 2 0 * * * * * * 2607 0 0 M 3 * * * * * * * * * 755 1296 * * * * * * * * * 3 0 * * * * * * 2607 0 0 K 4 * * * * * * * * 686 * * 2911 * * 3152 * 2912 * * * 4 0 * * * * * * 2607 0 0 Q 5 * * 3412 1534 * * * * * * 3870 * * 1477 * * * 2911 * * 5 0 * * * * * * 2607 0 0 T 6 * * * 1090 * * * * * * 3152 * * 3734 * 2980 2211 * * * 6 0 * * * * * * 2607 0 0 I 7 3412 * 3152 * * * * 692 * 3870 * * * * * * * 3236 * * 7 0 * * * * * * 2607 0 0 A 8 2253 * * 2321 2871 * * * * * * * * 2911 * 2912 3152 * * 3734 8 0 * * * * * * 2607 0 0 K 9 * * * * * * * * 1243 * * 2980 * 1149 * * * * * * 9 0 * * * * * * 2607 0 0 Q 10 * * * * * * 3152 * 2239 2980 1912 * * 1820 * * * * * * 10 0 * * * * * * 2607 0 0 E 11 * * * 1296 * * * * 3236 * * 2980 * * 2140 2911 * * * * 11 0 * * * * * * 2607 0 0 E 12 2911 * * 2355 * 3236 * * 1537 2980 * * * * * * 3412 * * * 12 0 * * * * * * 2607 0 0 D 13 * * 1105 1222 * * * * * * * * * * * 3236 * * * * 13 0 * * * * * * 2607 0 0 L 14 * 2980 * * * * * * 3152 1014 2912 * * * * * * 2911 * * 14 0 * * * * * * 2607 0 0 E 15 * * 2140 371 * * * * * * * * * * * * * * * * 15 0 * * * * * * 2607 0 0 T 16 * * * 2912 * * * * 2980 * * * * * * 2911 719 * * * 16 0 * * * * * * 2607 0 0 M 17 * * * * * * * 776 * * 3590 * * * * * * 1587 * * 17 0 * * * * * * 2607 0 0 T 18 * * * 3152 * * * * * * * * 755 * * 2239 3590 * * * 18 0 * * * * * * 2607 0 0 I 19 * * * * * * * 3590 * 3152 * * * * * * * 314 * * 19 0 * * * * * * 2607 0 0 L 20 * * * * 2239 * * * * 610 * * * * * * * * * 2911 20 0 * * * * * * 2607 0 0 R 21 * * * * * * * * 1500 * * * * 1536 2355 * 3236 * * * 21 0 * * * * * * 2607 0 0 A 22 434 * * * * * * * * * * * * * * * 2911 2980 * * 22 0 * * * * * * 2607 0 0 Q 23 * * * * * * * * * * * * * 0 * * * * * * 23 0 * * * * * * 2607 0 0 M 24 792 * * * * * * * * * 2211 * * * * * * 2276 * * 24 0 * * * * * * 2607 0 0 E 25 * * 1403 686 * * * * * * * * * * * * * * * * 25 0 * * * * * * 2607 0 0 V 26 2911 * * * * * * 1897 * 2980 * * * * * * * 1084 * * 26 0 * * * * * * 2607 0 0 Y 27 * * * * 2912 * * * * * * * * * * * * * * 206 27 0 * * * * * * 2607 0 0 C 28 * 2355 * 1945 * * * * 3236 * * * * * 2140 2239 * * * * 28 0 * * * * * * 2607 0 0 S 29 1678 * * * * * * * * * * 2911 * 2912 * 1246 * * * * 29 0 * * * * * * 2607 0 0 D 30 * * 0 * * * * * * * * * * * * * * * * * 30 0 * * * * * * 2607 0 0 F 31 * * * * 0 * * * * * * * * * * * * * * * 31 0 * * * * * * 2607 0 0 H 32 * * * 2912 * * 2355 * 2980 2321 * * * * 2911 * * * * 2239 32 0 * * * * * * 2607 0 0 A 33 196 * 2980 * * * * * * * * * * * * * * * * * 33 0 * * * * * * 2607 0 0 E 34 * * * 0 * * * * * * * * * * * * * * * * 34 0 * * * * * * 2607 0 0 R 35 * * * * * * * * * * * * * * 0 * * * * * 35 0 * * * * * * 2607 0 0 A 36 1225 * * 1451 * * * * 3412 * * * * * * 3152 * * * * 36 0 * * * * * * 2607 0 0 A 37 0 * * * * * * * * * * * * * * * * * * * 37 0 * * * * * * 2607 0 0 R 38 * * * * * * * * * * * * * * 0 * * * * * 38 0 * * * * * * 2607 0 0 E 39 * * * 206 * * * * * * * * * 2912 * * * * * * 39 0 * * * * * * 2607 0 0 K 40 * * * 3412 * * * * 334 * * 3152 * * * * * * * * 40 0 * * * * * * 2607 0 0 I 41 2912 * * * * * * 1083 * 1340 * * * * * * * * * * 41 0 * * * * * * 2607 0 0 H 42 * * * * * * 383 * * * * 3236 * * * * * 2980 * * 42 0 * * * * * * 2607 0 0 E 43 3412 * * 1762 * 1946 * * * * * * * 1508 * * * * * * 43 0 * * * * * * 2607 0 0 E 44 * * 1912 671 * * * * 3236 * * * * * * * * * * * 44 0 * * * * * * 2607 0 0 K 45 * * * * * * * * 586 2911 2912 * * * 3873 * * * * * 45 0 * * * * * * 2607 0 0 E 46 * 2911 * 446 * * * * * * * * * 2912 * * * * * * 46 0 * * * * * * 2607 0 0 Q 47 * * 3236 * * * * * 2980 * * * * 2355 1189 * 2912 * * * 47 0 * * * * * * 2607 0 0 L 48 * * * * * * * 2911 * 434 2980 * * * * * * * * * 48 0 * * * * * * 2607 0 0 A 49 1124 * * 2912 * * * * * * * 2911 * 2321 * 3734 * * * * 49 0 * * * * * * 2607 0 0 L 50 3734 * 3236 1500 * * * * * 3590 * * * 2912 * * 2005 * * * 50 0 * * * * * * 2607 0 0 Q 51 * * * * * * * * * * * * * 172 3152 * * * * * 51 0 * * * * * * 2607 0 0 L 52 * * * * * * * 2980 * 434 * 2912 * * * * * * * * 52 0 * * * * * * 2607 0 0 A 53 2355 * 2911 2239 * * * * * * * 3412 * 2912 2980 * 3236 * * * 53 0 * * * * * * 2607 0 0 V 54 * * * 1912 3734 * * 2980 * * * * * 3236 * * * 2498 * 2005 54 0 * * * * * * 2607 0 0 L 55 3236 * * * * * 2911 * * 1196 3152 * * * * * * 2239 * * 55 0 * * * * * * 2607 0 0 L 56 * * * * * * * 1309 2055 2307 * * * 2702 * * * * * * 56 0 * * * * * * 2493 0 0 K 57 3018 * * * * * * * 1577 1692 * * * 2108 * * * * * * 57 0 * * * * * * 2493 0 0 E 58 * * * 397 * * * * * * * * * 2055 * * * * * * 58 0 * * * * * * 2493 0 0 N 59 * * * * * * * 2532 * * * 274 * * * * * * * * 59 0 * * * * * * 2292 0 0 D 60 * * 0 * * * * * * * * * * * * * * * * * 60 0 * * * * * * 1464 0 0 A 61 0 * * * * * * * * * * * * * * * * * * * 61 0 * * 0 * * * 1000 0 0 //