HHsearch 1.5 NAME c5aimB_ FAM FILE c5aimB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5aimB_.a3m DATE Sat Jun 27 08:14:10 2015 LENG 98 match states, 98 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4491 1.4442 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTSEEESSHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTSSEEEEETTTTEEEEECTTSCHHHHHHHHHHTCC >sa_dssp EDDEDDCEEBEDBBEBADDBAEEDEABAABCEEBBDCAAEDDECEEDCEDEDADDAADEACEDEDACCDEBEECECCAABCDEDDDEBBDEBBEECEE >ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCC >ss_conf 97442456678889999999985298687437999999986121213438989989999951292599727876512898338986689999885149 >Consensus xgftaxSLKsxxRrxxilxiikxxGGVxxxxxxfxxxldkrmxntTxtDkKTlxrDvexLxxsgxLxvxxxqxxxrkllxLpxxxxxxiexxlxxxKd >c5aimB_ AMASARSLRSLQRQRAILKVMNTIGGVAYLREQFYESVSKYMGSTTTLDKKTVRGDVDLMVESEKLGARTEPVSGRKIIFLPTVGEDAIQRYILKEKD >UniRef50_B5RT99(584-680:1231) DEHA2C11484p n=2 Tax=Debaryomyces hansenii RepID=B5RT99_DEBHA E=3e-06 s/c=0.55 id=26% cov=90% ----SGSLKAIKRRTELINIIKDLGGVTYTTANLCRLLDKRLRNSTITDKKTLARDVSLLINNGELEvqdiqfIRSGQPISRKLLILtsPDLkpSDEKIE E------- >UniRef50_C4XYM3(564-663:1206) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XYM3_CLAL4 E=1e-10 s/c=0.68 id=15% cov=97% ---TESSVKSMTRRNLLIEIIREEGGACFSSSVLCRKLDTRMANSTVTDLKTLARDARHLASEGILEIQKakievgGQATEKNLMVLMNPKDRPSEKTLE ELK- >UniRef50_C5MCJ3(745-841:1429) Predicted protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCJ3_CANTT E=3e-08 s/c=0.62 id=33% cov=62% --------KSELRRNLIIEMTKEKGGVAYTSSEFLRELDARLGNTTTkSDRKTLTRDLARLQESGHLEV------------------------------ >UniRef50_B9WGB9(700-790:1380) TFIIIC subunit, putative (Subunit of the rna polymerase iii transcription initiation factor complex (Tfiiic), putative) n=2 Tax=Candida RepID=B9WGB9_CANDC E=1e-06 s/c=0.60 id=21% cov=54% ------------RRDLLVKLVESKGGILIFDAKLSRELDEKLENTTITDKRTIQRDIEKLQKSG---------------------------------- >UniRef50_A5E480(884-986:1529) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E480_LODEL E=4e-22 s/c=1.02 id=30% cov=88% ------------RRKVLLEVIKNLGGVTFARAKLAKLLDERMGSDTTTDLKTIVRDIHKLVESGDLEVQLvqvkenGQDMTRRLMILTDPKERPSDEMIE KVK- >UniRef50_C4QVY0(577-670:1225) Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) n=1 Tax=Pichia pastoris GS115 RepID=C4QVY0_PICPG E=7e-06 s/c=0.55 id=24% cov=56% -----------RRRQGILDLLRKSDGAALLDVSFVHQLDKRISNTTAsSDRRTIIRDFEFLTKEGE--------------------------------- >UniRef50_C5DHY9(446-693:1158) KLTH0E08272p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DHY9_LACTC E=3e-50 s/c=0.32 id=47% cov=101% GGFSAGSLKSLQRQRAILEAVKRNGGVTFFRDQFFDDVTKLMESKTTLDKKTIRGDVELLRATQKLVLKVDQSSGRRLMCLPNVSSEEISKFLVNEKD >UniRef50_Q6CXF6(461-746:1162) KLLA0A08734p n=1 Tax=Kluyveromyces lactis RepID=Q6CXF6_KLULA E=1e-91 s/c=0.46 id=36% cov=101% NGFTGSSLKSIQRQKALLTVLKNSGGVRFIGDKFYDSISKSMGTDMILDKKTLKKESEILAESGKLKIVEDPNTRRRLLCLPEISDEKIEEYLIDSKD >UniRef50_Q6FXX7(541-638:1162) Similar to uniprot|P34111 Saccharomyces cerevisiae YAL001c TFC3 n=1 Tax=Candida glabrata RepID=Q6FXX7_CANGA E=4e-28 s/c=1.42 id=48% cov=101% DGFSASSLRSLSRQKAIMKVLEKSGGVSLLREQFFEDVTNYMSSSTVIDKKTLKGDVDLMIGNSKLTLYTDPDTQKKVIHFPDVPMAKISDLLTDTKD # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 2331 * 2246 * * 1411 * * * * * 2221 * * * * * * * * 1 0 * * * * * * 2129 0 0 M 2 * * * * * 320 * * * * 2331 * * * * * * * * * 2 0 * * * * * * 2129 0 0 A 3 2331 * * * 320 * * * * * * * * * * * * * * * 3 0 * * * * * * 2129 0 0 S 4 * * * * * * * * * * * * * * * 1128 882 * * * 4 0 * * * * * * 2620 0 0 A 5 931 * * 2400 * 2867 * * * * * * * * * 2747 * * * * 5 0 * * * * * * 2736 0 0 R 6 * * * * * 1880 * * * * * 3038 * * 2873 1089 * * * * 6 0 * * * * * * 2736 0 0 S 7 * * * * * * * * * * * * * * * 0 * * * * 7 0 * * * * * * 2787 0 0 L 8 * * * * * * * * * 232 * * * * * * * 2752 * * 8 0 * * * * * * 2787 0 0 R 9 * * * * * * * * 368 * * * * * 2152 * * * * * 9 0 * * * * * * 2880 0 0 S 10 2597 * * * * 3433 * * * * * * * * * 430 * * * * 10 0 * * * * * * 2880 0 0 L 11 * * * 3540 * 3433 * 1828 * 1629 2955 * * * * 3516 * * * * 11 0 * * * * * * 2880 0 0 Q 12 * * * * * * * * 2745 3413 * * * 1467 2351 3328 3327 * * * 12 0 * * * * * * 3057 0 0 R 13 * * * * * * * * * * * * * * 0 * * * * * 13 0 * * * * * * 3205 0 0 Q 14 * * * * * * * * * * * * * 1307 747 * * * * * 14 0 * * * * * * 3205 0 0 R 15 * * 3518 * * * * * 1655 * * 2616 * 3245 2703 * 2531 * * * 15 0 * * * * * * 3205 0 0 A 16 1307 * * 2531 * 3245 * * * 1998 * * * * * * * 3900 * * 16 0 * * * * * * 3205 0 0 I 17 * * * * * * * 908 * 1098 * * * * * * * * * * 17 0 * * * * * * 3203 0 0 L 18 * * * * * * * 2277 * 774 3612 * * * * * * 2977 * * 18 0 * * * * * * 3203 0 0 K 19 * * 2576 1299 * * * * 2163 * * 3233 * * * * 3378 * * * 19 0 * * * * * * 3203 0 0 V 20 3785 * * * * * * 1687 * 2140 3790 * * * * * * 1654 * * 20 0 * * * * * * 3203 0 0 M 21 * * * * * * * 1709 * 1847 3707 * * * * * 3790 1903 * * 21 0 * * * * * * 3203 0 0 N 22 * * * 2260 * * * * 1102 * * 3707 * * 2007 * * * * * 22 0 * * * * * * 3203 0 0 T 23 * * 3233 2261 * * * * 2003 * * 2649 * * 3785 2977 3707 * * * 23 0 * * * * * * 3203 0 0 I 24 * * * 3624 * * * 3707 2327 2153 * 3785 * * * 1847 * * * 3881 24 0 * * * * * * 3203 0 0 G 25 * * 3324 * * 152 * * * * * * * * * * * * * * 25 0 * * * * * * 3203 0 0 G 26 * * * * * 0 * * * * * * * * * * * * * * 26 0 * * * * * * 3203 0 0 V 27 2466 * * * * * * 2977 * * * * * * * * * 531 * * 27 0 * * * * * * 3203 0 0 A 28 1727 3624 * * * * * * * 3945 * * * * 3378 3612 1682 4010 * * 28 0 * * * * * * 3203 0 0 Y 29 * * * * 1675 * * 2977 * 2461 * * * * * * * * * 1403 29 0 * * * * * * 3203 0 0 L 30 3983 * * * 2325 * * 3378 * 1953 * * * * * 3624 2096 3881 * * 30 0 * * * * * * 3203 0 0 R 31 * * 2140 * * 3378 * * * * * * * * 1466 2705 2630 * * * 31 0 * * * * * * 3203 0 0 E 32 1507 * 2079 2659 * * * * * * * * * * * 2705 * 3324 * * 32 0 * * * * * * 3203 0 0 Q 33 * * * 3790 * * * * 1839 * * 2570 * 1743 * 3324 * 3624 * * 33 0 * * * * * * 3203 0 0 F 34 * * * * 1002 * * * * 1189 * * * * * * * 4010 * * 34 0 * * * * * * 3203 0 0 Y 35 3983 2416 * * 2696 * * * * 3790 * * * * 4179 3945 4010 3324 * 2055 35 0 * * * * * * 3203 0 0 E 36 * * 2567 2144 * * 3324 * 3983 * * * * * 1178 * * * * * 36 0 * * * * * * 3203 0 0 S 37 * * 2170 2327 * * * * 3624 2545 * * * 2706 * 2533 * * * * 37 0 * * * * * * 3203 0 0 V 38 * * * * * * * 3378 * 725 * * * * * * * 1743 * * 38 0 * * * * * * 3203 0 0 S 39 * * 725 * * * * * * * * * * * * 2055 2696 * * * 39 0 * * * * * * 3203 0 0 K 40 3790 * * 2964 * * * * 778 * * 3612 * * * 4226 3624 * * * 40 0 * * * * * * 3203 0 0 Y 41 * * * * * * * * 2977 3785 * * * * 1065 3378 * * * 2144 41 0 * * * * * * 3203 0 0 M 42 * * * * * * * 3324 * 1222 1085 * * * * * * * * * 42 0 * * * * * * 3203 0 0 G 43 3624 * * 2325 * 1045 * * * * * * * * 4241 2461 * * * * 43 0 * * * * * * 3203 0 0 S 44 * * * * * * * * * * * 1060 * * * 1489 2608 * * * 44 0 * * * * * * 3203 0 0 T 45 * * 2649 * * * * * 2832 * * * * * * 1884 1220 * * * 45 0 * * * * * * 3203 0 0 T 46 * * * * * * * * * * 2608 * * * * * 259 * * * 46 0 * * * * * * 3203 0 0 T 47 2689 * * * * * * 1540 * * * * * * * * 1813 2209 * * 47 273 2538 * 0 * * * 3203 1538 0 L 48 * * * * * * * 3612 * 1675 * * * * * 2538 1208 * * * 48 0 * * * * * * 3203 0 0 D 49 * * 0 * * * * * * * * * * * * * * * * * 49 0 * * * * * * 3203 0 0 K 50 * * * * * * * 4179 670 2793 * * * * 2538 * * * * * 50 0 * * * * * * 3203 0 0 K 51 * * * * * * * * 371 * * * * * 2140 * * * * * 51 0 * * * * * * 3203 0 0 T 52 * * * * * * * * * * * * * * * * 0 * * * 52 0 * * * * * * 3203 0 0 V 53 * * * * * * * 1463 * 834 * * * * * * * 3707 * * 53 0 * * * * * * 3203 0 0 R 54 2043 * * * * * * 3324 2490 * * * * 2977 2204 * 3790 3983 * * 54 0 * * * * * * 3203 0 0 G 55 * * * * * 1743 * * 3378 * * * * * 725 * * * * * 55 0 * * * * * * 3203 0 0 D 56 * * 146 3378 * * * * * * * * * * * * * * * * 56 0 * * * * * * 3203 0 0 V 57 3624 * * * 3324 * * 2027 * 3790 * * * * * 3378 * 1304 * * 57 0 * * * * * * 3203 0 0 D 58 3790 * 2659 1109 * * 3983 * * * * * * * 3624 2630 * * * * 58 0 * * * * * * 3203 0 0 L 59 * * * * 3324 * 3624 3378 2394 1508 * * * * 3790 4179 4226 * * * 59 0 * * * * * * 3203 0 0 M 60 * * * * * * * * * 249 2659 * * * * * * * * * 60 0 * * * * * * 3203 0 0 V 61 2496 * * * * * * 2039 * * * * * 2327 3785 * 3324 2268 * * 61 0 * * * * * * 3203 0 0 E 62 2005 * * 1698 * 3612 * * 2140 * * 4241 * * * 3624 * * * * 62 0 * * * * * * 3203 0 0 S 63 3881 * 4226 2466 * * * * * * * 2892 * * * 1028 3785 * * * 63 0 * * * * * * 3203 0 0 E 64 * * * 3707 * 630 * * 4179 * * 3881 * 3785 * 3612 * * * * 64 0 * * * * * * 3203 0 0 K 65 * * 2861 2500 * * 3519 3455 1201 * * * * * * 3792 * * * * 65 0 * * * * * * 3125 0 0 L 66 * * * * * * * 3631 * 121 * * * * * * * * * * 66 0 * * * * * * 2992 0 0 G 67 * * 3659 1529 * 3326 * * 2401 * * * * * * * 3121 3483 * 3631 67 106 3824 * 2585 263 * * 2992 1000 0 A 68 3326 * * * * * * 1804 * 2291 * * * * * * * 1288 * * 68 276 2522 * 2585 263 * * 2992 1252 0 R 69 * * * * * * * * 2501 * * 3397 * 2164 1854 * * 3249 * 3017 69 0 * * * * * * 2906 0 0 T 70 * * * 3249 * * * * 2918 3462 * * * * * 2578 1679 2381 * * 70 364 2164 * 2585 263 * * 2906 1459 0 E 71 * * 1618 3195 * 1089 * * 3397 * * * * * * * * * * * 71 0 * * * * * * 2906 0 0 P 72 * * * * * * * * * * * * 1208 818 * * * * * * 72 144 * 3397 * * * * 2906 0 0 V 73 2867 * 2096 * * * * * * * * 2179 3593 3487 * 3122 * 3043 * * 73 0 * * * * 0 * 2847 0 1000 S 74 * * * * * * * 2017 * * 3462 3397 * * * 2278 1470 * * * 74 0 * * * * * * 2906 0 0 G 75 * * * 2918 * 1731 * * * * * * * 3017 3249 2578 2553 * * * 75 0 * * * * * * 2906 0 0 R 76 * * * * * * * * 1966 * * * * * 426 * * * * * 76 0 * * * * * * 2906 0 0 K 77 * * * * * * * * 1059 * * 2918 * * 1366 * * * * * 77 0 * * * * * * 2906 0 0 I 78 * * * * * * * 3195 * 573 * * * * * * * 2194 * * 78 0 * * * * * * 2906 0 0 I 79 * * * * * * * 2103 * 1161 1643 * * * * * * * * * 79 0 * * * * * * 2906 0 0 F 80 * 2306 * * 3195 * 3017 1566 * * * * * * * * * 2918 * 3397 80 0 * * * * * * 2906 0 0 L 81 * * * * 3017 * * * * 190 * * * * * * * * * * 81 264 2578 * 1000 1000 * * 2906 1206 0 P 82 * * * * * * * * * * 2918 * 520 * * * 2553 * * * 82 0 * * * * * * 2906 0 0 T 83 * * 1775 1866 * * * * * * * 2124 * * * 3397 3195 * * * 83 0 * * * * * * 2906 0 0 V 84 * * * * 3340 * * 3146 * 3493 3291 * 2000 * * * * 1526 * * 84 300 2414 * 1000 1000 * * 2948 1206 0 G 85 * * 3291 * * 3125 * * 2000 * * * 2968 * * 1302 * * * * 85 0 * * * * * * 2948 0 0 E 86 * * 1562 1615 * 3291 * * * * 2968 * * * * 3253 * * * * 86 0 * * * * * * 2948 0 0 D 87 2968 * 2229 1290 * * * * * * * * * * 2000 * * * * * 87 0 * * * * * * 2948 0 0 A 88 3125 * * 3253 * * * * 1601 * * * 2000 2315 * * * * * * 88 0 * * * * * * 2948 0 0 I 89 * * * * * * * 415 * * * * * * * 2000 * * * * 89 0 * * * * * * 2948 0 0 Q 90 * * 3146 890 * * * * * * * * * 3125 * 2103 * * * * 90 0 * * * * * * 2948 0 0 R 91 * * 2968 1667 * * * * 1554 * * * * * 2206 * * * * * 91 0 * * * * * * 2948 0 0 Y 92 * * * * 3019 * * * * 2770 2756 * * * * * 2476 * * 1314 92 0 * * * * * * 2845 0 0 I 93 * * * * * * * 1821 * 480 * * * * * * * * * * 93 0 * * * * * * 2845 0 0 L 94 * * * 1609 * * * 2883 * 2890 * 2923 * * * * 2770 3019 * * 94 0 * * * * * * 2845 0 0 K 95 * * 1826 2476 * * * * 1821 * * 3019 * * * 2923 * * * * 95 0 * * * * * * 2845 0 0 E 96 * * * 1953 * * * * * 2476 * * * * * 2883 2770 1837 * * 96 0 * * * * * * 2845 0 0 K 97 * * * * * * * * 204 * * * * * 2923 * * * * * 97 0 * * * * * * 2845 0 0 D 98 * * 0 * * * * * * * * * * * * * * * * * 98 0 * * 0 * * * 2129 0 0 //