HHsearch 1.5 NAME c5af6J_ FAM FILE c5af6J_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5af6J_.a3m DATE Sat Mar 28 08:12:10 2015 LENG 28 match states, 28 columns in multiple alignment FILT 38 out of 42 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.5066 3.6058 SEQ >ss_dssp CCCEECTTTCCEECTTCSBCSSSCCBCC >sa_dssp EDDCDBEECEDEAECECEDBEEDECEDE >ss_pred CCCCCCCCCCHHHCHHHHHHHHCCCCCC >ss_conf 9731566758312520111010388997 >Consensus gxKWxCxxCTYxNwpxsxkCxmCxxxrP >c5af6J_ GIKWACEYCTYENWPSAIKCTMCRAQRP >UniRef50_A7RLB9(159-184:685) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RLB9_NEMVE E=7e-07 s/c=2.11 id=52% cov=96% --KWQCPNCTYENWPKTAKCVICGTTKP >UniRef50_A7RLB9(88-113:685) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RLB9_NEMVE E=2e-06 s/c=2.05 id=48% cov=96% --KWKCPTCTFDNWPNALRCVMCHNNAP >UniRef50_UPI0001926C64(130-154:679) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926C64 E=4e-06 s/c=2.10 id=54% cov=93% --KWICIKCTYENWPKAVRCIICQHPR- >UniRef50_Q1RL65(178-203:688) Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RL65_CIOIN E=0.0002 s/c=1.82 id=48% cov=96% --KWTCAVCTYINWCSSKMCVMCQNPQP >UniRef50_A8PY13(114-138:729) Zn-finger in Ran binding protein and others containing protein n=1 Tax=Brugia malayi RepID=A8PY13_BRUMA E=0.0002 s/c=1.86 id=50% cov=93% --KWDCSQCTYKNWPNVKHCTMCGTPK- >UniRef50_UPI0001926C64(71-97:679) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926C64 E=0.0002 s/c=1.73 id=39% cov=100% -LKWNCPACSYLNWIKSELCIMCKTDKP >UniRef50_D2VR21(594-619:1185) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VR21_NAEGR E=0.0001 s/c=1.83 id=44% cov=96% --KWSCSECTYLNVNSLSRCKLCDTPRP >UniRef50_B4QWH5(2217-2241:2749) Hyd n=3 Tax=Eumetazoa RepID=B4QWH5_DROSI E=3e-07 s/c=2.26 id=46% cov=93% --KWPCKVCTYLNWPRSLRCVQCCTKR- >UniRef50_UPI0000E45F53(73-97:675) PREDICTED: similar to LOC495328 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45F53 E=7e-06 s/c=2.07 id=50% cov=93% --KWPCKACTYLNWPQAAKCALCHHAK- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1674 0 0 I 2 3088 3036 * * * 3275 * 3477 * 1424 * * * * * * * 2360 * * 2 0 * * * * * * 2045 0 0 K 3 * * * * * * * * 0 * * * * * * * * * * * 3 0 * * * * * * 2910 0 0 W 4 * * * * * * * * * * * * * * * * * * 0 * 4 0 * * * * * * 2937 0 0 A 5 3064 * 4819 * 5579 * * 3910 3981 * * 4168 3798 5128 * 1748 2271 4906 * * 5 0 * * * * * * 2937 0 0 C 6 * 0 * * * * * * * * * * * * * * * * * * 6 0 * * * * * * 2937 0 0 E 7 3178 * 4317 2939 * 5340 4558 4268 3695 5046 * 5227 2798 4486 5541 2024 * * * * 7 0 * * * * * * 2937 0 0 Y 8 2157 * * 3416 * * 4686 5596 4581 * 5436 5128 * 3799 5442 5227 3371 2500 * 2900 8 0 * * * * * * 2937 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 2937 0 0 T 10 * * * * * * * * * * * * * * * 4168 83 * * * 10 0 * * * * * * 2937 0 0 Y 11 * * * * 3913 * * * * * * * * * * * * * * 99 11 0 * * * * * * 2937 0 0 E 12 4779 * 3418 1140 * * 5351 4748 4819 1907 * * * 5011 * 5541 * * * * 12 0 * * * * * * 2937 0 0 N 13 * * * * * * * * * * * 0 * * * * * * * * 13 0 * * * * * * 2937 0 0 W 14 5046 * * * 3617 * * * * * * * * 5108 * * * 4560 384 4304 14 0 * * * * * * 2937 0 0 P 15 4758 4748 * * * * 5129 3668 * 5046 * 4560 546 4779 * * * * * 5351 15 0 * * * * * * 2937 0 0 S 16 5400 * * * * * * * 1268 * * 3704 * 3922 3354 1946 4032 * * * 16 0 * * * * * * 2937 0 0 A 17 1358 * * * * * * * * 4560 * * * * * 1089 4013 4819 * * 17 0 * * * * * * 2937 0 0 I 18 4243 * * 4168 3557 5779 * 2680 2509 2179 * * * 5533 4164 4091 5340 3736 * * 18 0 * * * * * * 2937 0 0 K 19 4779 * * * * * 3342 * 992 4168 4748 * * * 1893 * * * * * 19 0 * * * * * * 2937 0 0 C 20 * 0 * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 2937 0 0 T 21 4119 * * * * * * 2978 4560 * * * * * * 4392 1363 1570 * * 21 0 * * * * * * 2937 0 0 M 22 5108 * * * * * * 3810 * 2403 856 * * 3461 * * * 3895 * * 22 0 * * * * * * 2937 0 0 C 23 * 0 * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 2937 0 0 R 24 * 5335 3141 * 4997 2721 2908 * 3639 3038 * * * 2912 2677 4198 * * * * 24 0 * * * * * * 2931 0 0 A 25 2331 4873 * * * 4455 2832 * 4304 * * 2990 * * 5076 3833 1714 * * * 25 0 * * * * * * 2931 0 0 Q 26 3809 * 4121 * * * * * 4435 5332 * 4558 1099 3483 4924 4208 3129 * * * 26 0 * * * * * * 2931 0 0 R 27 4558 * * * * 4924 * * 1674 * * * 4997 4692 886 * * * * * 27 0 * * * * * * 2931 0 0 P 28 * * * * * * * * * * * * 0 * * * * * * * 28 0 * * 0 * * * 2673 0 0 //