HHsearch 1.5 NAME c5af6H_ FAM FILE c5af6H_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5af6H_.a3m DATE Sat Mar 28 08:14:07 2015 LENG 28 match states, 28 columns in multiple alignment FILT 40 out of 44 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.9 EVD 0.5069 3.4348 SEQ >ss_dssp CCEECSSSCCEECTTCSBCSSSCCBCCC >sa_dssp EDBDBEECEDDAEDECEDBEEDEBDDCE >ss_pred CCCCCCCCCHHHCCCCCEEEECCCCCCC >ss_conf 9326778582007000001224789897 >Consensus xKWxCxxCTYxNwpxsxkCxmCxxxrpt >c5af6H_ IKWACEYCTYENWPSAIKCTMCRAQRPS >UniRef50_A7RLB9(88-113:685) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RLB9_NEMVE E=0.0002 s/c=1.79 id=48% cov=96% -KWKCPTCTFDNWPNALRCVMCHNNAP- >UniRef50_A7RLB9(159-184:685) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RLB9_NEMVE E=0.0004 s/c=1.78 id=52% cov=96% -KWQCPNCTYENWPKTAKCVICGTTKP- >UniRef50_UPI0000E45F53(73-99:675) PREDICTED: similar to LOC495328 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45F53 E=1e-06 s/c=2.01 id=46% cov=100% -KWPCKACTYLNWPQAAKCALCHHAKGT >UniRef50_Q1RL65(178-203:688) Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RL65_CIOIN E=0.0002 s/c=1.80 id=48% cov=96% -KWTCAVCTYINWCSSKMCVMCQNPQP- >UniRef50_UPI0001926C64(71-97:679) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926C64 E=0.0002 s/c=1.72 id=39% cov=100% LKWNCPACSYLNWIKSELCIMCKTDKP- >UniRef50_D2VR21(594-620:1185) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VR21_NAEGR E=1e-06 s/c=2.00 id=46% cov=100% -KWSCSECTYLNVNSLSRCKLCDTPRPS >UniRef50_Q4DQG7(192-217:292) Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DQG7_TRYCR E=0.0007 s/c=1.74 id=41% cov=96% --WSCHVCTYINRPHATVCVVCRTPKAT >UniRef50_UPI0001A2C387(153-178:689) similar to zinc finger, RAN-binding domain containing 1 (LOC793789), mRNA n=3 Tax=Clupeocephala RepID=UPI0001A2C387 E=0.0001 s/c=1.83 id=41% cov=96% --WTCLACTYENALKSFRCVVCDHPRPN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 * * * * * * * 2776 * 872 * * * * * * * 1700 * * 1 0 * * * * * * 1791 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 2902 0 0 W 3 * * * * * * * * * * * * * * * * * * 0 * 3 0 * * * * * * 2958 0 0 A 4 3132 * 4872 * 5629 * * 3969 4029 * * 4219 3872 5164 * 1597 2369 4944 * * 4 0 * * * * * * 2958 0 0 C 5 * 0 * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 2958 0 0 E 6 3091 * 4402 3008 * 5502 3768 4323 3760 5168 * 5268 2845 4544 5587 2088 * * * * 6 0 * * * * * * 2958 0 0 Y 7 2132 * * 3466 * * 4751 5656 4645 * 5521 5164 * 3873 5506 5268 3415 2328 * 2992 7 0 * * * * * * 2958 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 2958 0 0 T 9 * * * * * * * * * * * * * * * 4219 80 * * * 9 0 * * * * * * 2958 0 0 Y 10 * * * * 3953 * * * * * * * * * * * * * * 96 10 0 * * * * * * 2958 0 0 E 11 4874 * 3484 1211 * * 5390 3906 4872 1977 * * * 4469 * 5587 * * * * 11 0 * * * * * * 2958 0 0 N 12 * * * * * * * * * * * 0 * * * * * * * * 12 0 * * * * * * 2958 0 0 W 13 5168 * * * 3712 * * * * * * * * 5189 4900 * * 4617 422 4378 13 0 * * * * * * 2958 0 0 P 14 4868 4911 * * * * 5202 3723 * 5168 * 4617 508 4874 * * * * * 5390 14 0 * * * * * * 2958 0 0 S 15 5516 * * * * * 4900 * 1281 * * 3747 * 4002 3415 2022 4154 * * * 15 0 * * * * * * 2958 0 0 A 16 1311 * * * * * * * * 4617 * * * * * 1115 4050 4872 * * 16 0 * * * * * * 2958 0 0 I 17 4287 * * 4219 3399 5860 * 2735 2584 2248 * * * 5634 4259 4153 4170 3808 * * 17 0 * * * * * * 2958 0 0 K 18 4874 * * * * * 3387 * 1020 4219 4911 * * * 1961 * * 4900 * * 18 0 * * * * * * 2958 0 0 C 19 * 0 * * * * * * * * * * * * * * * * * * 19 0 * * * * * * 2958 0 0 T 20 4163 * * * * * * 2867 4617 * * * * * * 4437 1444 1504 * * 20 0 * * * * * * 2958 0 0 M 21 5189 * * * * * * 3860 * 2476 885 * * 3528 * * * 3387 * * 21 0 * * * * * * 2958 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 27 5751 * 1000 1000 * * 2958 1000 0 R 23 * 5407 3192 * 5041 2813 2974 * 3703 3148 * * * 3021 2306 4266 * * * * 23 0 * * * * * * 3094 0 0 A 24 2425 4905 * * * 4055 2901 * 4362 * * 3076 * * 5154 3924 1621 * * * 24 0 * * * * * * 3094 0 0 Q 25 3936 * 4150 * * * * * 4515 5411 * 4576 1011 3593 5130 4274 3185 * * * 25 0 * * * * * * 3094 0 0 R 26 4576 * * * * 5130 * * 1578 * * * * 4856 917 5041 * * * * 26 0 * * * * * * 3094 0 0 P 27 4387 * * 4749 * 4519 4233 * 5036 * * * 503 * 4436 4793 * * * * 27 0 * * * * * * 2987 0 0 S 28 * * * * * * * * * * * 2513 * * * 1520 1070 * * * 28 0 * * 0 * * * 2585 0 0 //