HHsearch 1.5 NAME c4ympC_ FAM FILE c4ympC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ympC_.a3m DATE Sat Jul 23 08:21:18 2016 LENG 103 match states, 103 columns in multiple alignment FILT 100 out of 104 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.1 EVD 0.4617 0.6119 SEQ >ss_dssp CEEEEEECTTSSSBCGGGGGEEEEEEECCEEEEEEESGGGEEEEECCCBCEEEEEECSSSCEEEEEEECCCSEEEEEEEEEETTTTEEEEEEEEEEEEEC CCC >sa_dssp EACBDBBDDEDEEEBEBCECCECBDCDEECABACBECBDCBECBCCEEDCEDEDEDEEEEACCCACBECDDEDDDBCBBCDCEEEEDEDDDDBBABACED EEE >ss_pred CCEEEEEECCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEEEEEEEECCEEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEEECCC CCC >ss_conf 9289999648988310342375556865999999807413889999942238853044366389999716764337999996065788458999995100 139 >Consensus dxxvkVlKxxtdexSxmxxYvxkpkxGkxyvxxTlxxsxwikxfkvxxdxxxVsxdxxxxxtRvVxFeVlxxxxnaxvhvxVpxixYdhxYxVqxxfdxx sxx >c4ympC_ DAVIKAYKDNSDEESYATVYIKDPKLTIRIITATLKDSDFFDYLKVFHDVKVLSEDKRKHGTKVIQFEVLGKRYNMQMHILIPTLGYDKEFKIQFEVNMR TFV >UniRef50_Q9K7R0(46-149:221) BH3299 protein n=1 Tax=Bacillus halodurans RepID=Q9K7R0_BACHD E=0.0001 s/c=0.46 id=26% cov=90% -----VLHADNDSASMANDYWEKPaRLTVNGGNMTMQmtinHSSWVTEFKVpsnggFRDVTVVSTDEAAD-KRVVEFPIsdLSTPLESKIHVTVEDIDYD HDYTIRLSFD----- >UniRef50_B1HP21(175-285:474) 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein n=2 Tax=Bacillaceae RepID=B1HP21_LYSSC E=6e-15 s/c=0.74 id=29% cov=90% ---VTVYKDGTTEESMMKQYIapkvgVTVKDGKNVVTMTFPQGQYVKGFTVEGKEATLVKQDDATNSRTYSFEVkdLKKLVSAQLHIVVnePAQGvkYDS NHTVQF-------- >UniRef50_Q9K7R1(238-351:1071) BH3298 protein n=1 Tax=Bacillus halodurans RepID=Q9K7R1_BACHD E=9e-11 s/c=0.60 id=16% cov=93% ----RALRADNDNLSSMDGYLGKPALlevegGKTFVSLTINerEGQFLTDVRLDTNGEwtsgTVVSEDPENLSRVVKYEVanIAAVIDAEVDMYVPRANY RNKQKFRLALDM---- >UniRef50_C6CXI6(816-924:1149) S-layer domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXI6_PAESJ E=6e-23 s/c=0.99 id=22% cov=97% ----RILKDGTDETSIMNTYVntralVNVSSGSKSVSFTLKQSKQITAVKLSGSSGSVSNESTANNTRVVTFQLssLSSKVNGWVDVNWPEINYVHNYDV QFQFDESSAV >UniRef50_Q6GHV7(354-455:652) Iron-regulated surface determinant protein B n=53 Tax=Staphylococcus aureus RepID=ISDB_STAAR E=5e-15 s/c=0.81 id=17% cov=92% DTKYVVYESVENNESMMDAFVKHPiktgmLNGKKYMVMETTNDDYWKDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKtlYDAIVKVHVKTIDYDGQYHV R--------- >UniRef50_A7X149(34-148:227) Iron-regulated surface determinant protein C n=53 Tax=Staphylococcus aureus RepID=ISDC_STAA1 E=3e-16 s/c=0.75 id=21% cov=97% ----EVYKYNTNDTSIANDYFNKPakyikKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVskLNGKIDGKIDVYIDekvngkPFKY DHHYNITYKFNGPTDV >UniRef50_A0AKT8(41-170:574) Complete genome n=21 Tax=Listeria RepID=A0AKT8_LISW6 E=2e-09 s/c=0.49 id=25% cov=97% ---VNFYKDNtgktTKESSEADKYIDhtatiKVENGQPYMYLTITNSNFWQTMAVSKDGTrpekpaqaevyqdsyqdvQTVSSDAANNTRVEKFKLssLD DVIFSYMHIKVDAINYDHWYQVDLTIDPSTF- >UniRef50_Q6GHV6(69-176:354) Iron-regulated surface determinant protein A n=69 Tax=Staphylococcus aureus RepID=ISDA_STAAR E=1e-11 s/c=0.66 id=24% cov=90% ----QVQKDGSSEKSHMDDYMQHPGkvikqNNKYYFQAVLNNASFWKEYKFYNAnnqelATTVVNDDKKADTRTINVAVEPgyKSLTTKVHIVVPQINYN HRYTTHLE------- >UniRef50_A0PYS3(80-186:467) Conserved protein n=2 Tax=Clostridium RepID=A0PYS3_CLONN E=2e-09 s/c=0.59 id=18% cov=89% --EIKTLKQENDEPSMAGTYLNKEaryikENGKIYCEIDVLALDWMKNISIEVEGKKVEHTQKETGKAKVmemehtagliKFEVPKVNPKLTFHMYVVPM SSDVTFRV---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 209 2892 * * * * * * * * * * * * * * * * 1 0 * * * * * * 3048 0 0 A 2 2331 * * * * * * 2031 * * * * * * * * 1781 1913 * * 2 0 * * * * * * 3048 0 0 V 3 * * * 1437 * * * * 2879 * * 3365 * * * 3249 2753 2793 * * 3 0 * * * * * * 3658 0 0 I 4 * * * * 2421 * * 2031 * * * * * * * * * 1067 * 3454 4 0 * * * * * * 3939 0 0 K 5 5973 * * 4351 * * * * 935 * * 4344 * 2706 3739 * 5105 4273 * 4215 5 0 * * * * * * 4754 0 0 A 6 3023 * * * 5084 * * 2802 * * * * * * * * 3863 654 * * 6 0 * * * * * * 5044 0 0 Y 7 * * * * 4597 * * * 5476 602 * 6174 * 4517 4301 * * * 6743 2646 7 0 * * * * * * 5248 0 0 K 8 5774 * * 4678 * * 4955 * 348 * * * * 4355 3722 * * * * * 8 0 * * * * * * 5263 0 0 D 9 3121 * 1373 2616 * 4574 5509 * * * * 4061 6195 3859 * 3651 6092 * * 4827 9 0 * * * * * * 5263 0 0 N 10 * * 2778 3840 * 2061 * * 2732 5781 * 2166 * 3538 * 5483 5424 5541 * * 10 38 5259 * 2000 415 * * 5263 1065 0 S 11 * * 3814 3847 * 5682 * * 3718 * * 2599 * * * 2553 1222 * * * 11 0 * * * * * * 5263 0 0 D 12 5665 * 1303 3435 * * * * 4276 * * 1727 * 5808 5292 5809 3888 * * * 12 0 * * * * * * 5254 0 0 E 13 6427 * 2566 787 * * * * * * * 3886 * 5896 5796 3029 6067 * * * 13 56 4726 * 3000 193 * * 5254 1568 0 E 14 3238 * 5844 2110 * * * 4411 5832 3390 * 5669 2437 * * 5003 2980 3027 * * 14 0 * * * * * * 5345 0 0 S 15 * * * * * * * * 3733 * * * * * * 113 * * * * 15 12 6879 * 3000 193 * * 5342 1000 0 Y 16 6131 * * 5454 * * 3632 3812 4240 * 1305 * 3579 * 4243 4488 5852 2814 * 6271 16 0 * * * * * * 5342 0 0 A 17 1253 * * * * * * * * 4841 956 * * * * 6064 * 6037 * * 17 0 * * * * * * 5342 0 0 T 18 5095 * 1901 4665 * 2783 7250 * 6056 * * 1583 * 5679 * 4113 3546 * * * 18 0 * * * * * * 5342 0 0 V 19 5729 * 2323 5339 * 2751 * 6508 5454 4252 * 3620 * 2363 5852 4132 2965 4519 * * 19 0 * * * * * * 5342 0 0 Y 20 * * * * 4862 * 6378 6269 * * * * * * * * 6431 5526 * 140 20 0 * * * * * * 5342 0 0 I 21 6453 * * * 3260 * * 2616 * 3294 4755 * 6527 * * 5538 2691 1535 4329 * 21 59 4629 * 2322 322 * * 5342 2091 0 K 22 5728 * 3501 2296 * 4287 * 5152 1996 * 5451 3352 * 4100 * 5458 * 2668 * * 22 36 5335 * 2322 322 * * 5342 1636 0 D 23 * * 2987 * * 6431 2835 * 1122 * * 3482 5770 5738 7701 3105 6056 * * * 23 154 3307 * 2259 338 * * 5342 2254 0 P 24 7583 * * 3322 * 3794 * 6747 7067 * * 5060 604 * * * * 3080 * * 24 931 1072 * 2284 332 * * 5342 4396 0 K 25 3142 * * 2465 * 2898 * * 1122 4862 * 6102 * 6545 5094 5439 * * * * 25 153 3314 * 2227 347 * * 5342 3071 0 L 26 5469 * 1827 5783 6915 4505 * 6378 5055 3691 6269 1522 * 6545 * 6102 5041 4412 * 4579 26 163 3226 * 2282 332 * * 5342 3389 0 T 27 5753 * 5619 6879 * 548 * 5513 6579 * * 3533 * 5587 * * 3222 5523 * * 27 17 * 6378 * * * * 5342 0 0 I 28 * * 7078 3921 * 6235 * 4124 1074 * * 4219 * 3103 4623 5108 5519 3065 * * 28 42 5116 * 2198 355 * 0 5330 2012 1000 R 29 4197 * 4723 7033 6231 * 6198 4468 1604 6638 4019 4690 4441 3801 4335 * 3087 * * 3274 29 55 5278 6427 2322 322 * 0 5330 1513 1000 I 30 * * * 5470 4312 6296 * 4756 3705 4314 4633 * * * 6669 6115 2529 4303 * 1114 30 87 * 4099 * * 1000 1000 5230 0 1397 I 31 3173 6047 * * 2544 6236 * 3008 5487 4097 3962 * * * * * * 1251 * * 31 0 * * * * * 0 5204 0 2154 T 32 4926 * 3886 3599 * 6972 * 3415 6606 * 6747 6236 * 3030 5752 2325 2490 3195 * 4196 32 33 * 5487 * * 2281 332 5204 0 2154 A 33 4305 * * * 2863 * 5012 2910 * 2019 2256 * * * * * 6423 2594 * 6110 33 12 6961 * 2000 415 313 2358 5188 1000 2084 T 34 * * 4924 5598 * * * * 3206 * * 4645 6674 6530 5994 * 424 5926 * * 34 0 * * * * * 0 5231 0 1000 L 35 * * * * 4398 * * 2354 * 1028 4674 * * * * * 4736 2396 * * 35 0 * * * * 0 * 5228 0 1000 K 36 6493 * 5157 6422 * * * * 2419 2996 * 1689 6069 5254 * 4091 2140 * * * 36 53 4796 * 1319 739 * * 5342 1585 0 D 37 5784 * 3041 5334 * * 2090 * 4242 * * 1610 * 3588 3439 4483 * * * * 37 0 * * * * * * 5342 0 0 S 38 5014 * 4298 * 6711 4655 * 4332 * 4765 6230 4402 * * 4339 654 5348 6329 * * 38 0 * * * * * * 5342 0 0 D 39 3835 * 1972 4465 5791 * 4317 * 2935 * * 3552 * 4655 * 1808 5630 * * * 39 0 * * * * * * 5342 0 0 F 40 6227 * * 5133 3509 * * * * 5691 * * * 4976 * 5446 5682 5421 618 3293 40 0 * * * * * * 5342 0 0 F 41 * * * * 4710 * * 1325 * 4669 2648 * * * * * * 2789 2703 3934 41 0 * * * * * * 5342 0 0 D 42 6720 * 6290 4448 * * * * 1261 * * 5102 7464 3395 * 6180 1504 5760 * * 42 0 * * * * * * 5342 0 0 Y 43 3842 * 2677 3459 * 3455 * * 3755 4764 * 2415 * 3886 * 3123 4471 5171 * 4710 43 0 * * * * * * 5342 0 0 L 44 * * * * 1132 * * 2682 * 2378 3995 * * * * * * 3998 * 3830 44 0 * * * * * * 5342 0 0 K 45 5482 * 4936 4043 * * 5333 6011 1460 * 5730 5746 * 2151 3746 3817 4003 * 6635 * 45 151 3332 * 2540 272 * * 5342 2536 0 V 46 4090 * * * 3229 * * 2182 * 4668 * * 6225 * * 7258 2641 1341 * * 46 315 2351 * 2578 264 * * 5342 3300 0 F 47 5559 * 4087 1762 2150 6227 * * 5746 5279 6711 6050 6225 5682 * 3955 4705 * 4829 2770 47 7 7680 * 2322 322 * * 5342 1000 0 H 48 5041 * 4979 * * 2203 4710 * 3426 * * 5840 * 2848 5791 5554 4115 1649 * 5857 48 131 3529 * 1819 481 * * 5342 3110 0 D 49 4048 * 1204 3263 * 4019 5463 * 3563 * * 3027 * 4908 * 4488 5922 6050 * * 49 90 4046 * 1623 567 * * 5342 2243 0 V 50 2783 * 5024 5190 * 1585 * * 5497 6406 5482 4973 4144 6970 3914 5693 4127 2576 * * 50 88 4086 * 2035 404 * * 5373 2144 0 K 51 3094 * * 2389 * 6135 7261 * 1599 * * 5398 4747 4725 6148 5920 2590 4452 * * 51 113 3728 * 2722 237 * * 5373 3080 0 V 52 6388 * 5699 3226 * * * 4204 4670 4930 * 4991 6022 5059 5638 3630 2504 1435 * 6408 52 18 6296 * 2000 415 * * 5374 1000 0 L 53 * * * * * * * 2417 * 3789 * * * * * 6022 3100 717 * * 53 61 4594 * 2377 308 * * 5374 1986 0 S 54 3793 * 6408 4426 * * * 3416 4804 4053 * 3743 * * * 1176 5329 2861 * * 54 9 7375 * 2000 415 * * 5374 1000 0 E 55 3802 * 5236 1920 * 5437 5733 * 3479 6021 * 4474 5763 * * 2168 3102 5287 * 4001 55 0 * * * * * * 5375 0 0 D 56 * * 1036 2638 * * * * 2934 6797 * 3207 * 4799 * 5151 4660 * * * 56 41 5864 6526 2000 415 * * 5375 1487 0 K 57 4517 * 1848 3307 * 5320 * 4340 2406 * * 3776 5277 3604 * 4302 3880 6087 * * 57 21 6117 * 0 * 0 * 5373 1000 1000 R 58 2333 * 3982 2932 * 4559 * 6370 2332 * * 3612 4547 5077 5148 4863 3503 4348 * * 58 48 5663 6260 1000 1000 * * 5375 1000 0 K 59 1628 * 6258 2635 * 4536 * * 2046 6110 * * * 4099 5986 3499 6930 4971 * * 59 36 5762 7284 1000 1000 0 * 5365 1000 1000 H 60 3963 * 1935 4336 * 4885 5051 * 3682 * * 1467 * 5721 6729 4256 4631 * * * 60 715 6373 1401 0 * 0 * 5379 1000 1000 G 61 * * 1538 3702 * 2646 * * 4414 4616 5725 1804 * * 5270 * * * * * 61 172 4011 4311 430 1955 0 * 5170 1641 3841 T 62 5622 * * 5617 * * * * 2430 * 5856 3856 * * * 3615 818 4701 * * 62 0 * * * * 0 * 5376 0 1701 K 63 3623 * * * * 4816 * 5322 4217 * * * * * 435 6106 * 4316 * * 63 37 5309 * 0 * * * 5375 1078 0 V 64 5670 * 3927 4609 * * * 3876 3984 5368 5763 * * * * * 1790 1285 * * 64 0 * * * * * * 5375 0 0 I 65 * * * 5467 6124 * * 2073 * 4498 * * * * * 4813 5536 785 * 4513 65 27 5733 * 3322 152 * * 5375 1000 0 Q 66 5908 * * 1898 * * * 4801 2652 * * 4994 * 2684 2642 4112 3121 * * * 66 0 * * * * * * 5375 0 0 F 67 * * * * 311 * * 5323 * * 4697 * * * * * * 4281 * 3658 67 111 3756 * 1000 1000 * * 5375 2443 0 E 68 4666 * 3605 1213 * * * * 3504 * * * 2086 4880 * * 3965 5298 * * 68 12 6968 * 0 * * * 5375 1000 0 V 69 5345 * 3823 * * 6389 * 2560 * 3856 * * * * * * 5491 789 * 4236 69 1502 628 * 1022 979 * * 5372 4428 0 L 70 5301 * * 5743 6058 * * 2704 5464 939 * 5149 3612 * * 5315 5306 3595 * * 70 0 * * * * * * 5165 0 0 G 71 4335 * 3077 2825 7227 4581 5482 * 3420 5461 * 3193 4333 * * 1855 3868 * * * 71 72 4354 * 1000 1000 * * 5165 1991 0 K 72 3965 * 4091 2240 * 3446 * 6090 1442 * * 4920 * 4226 * 5984 4012 5211 * * 72 0 * * * * * * 5165 0 0 R 73 5333 * 5613 4324 * * * 4708 1661 4633 4957 3639 2536 5482 4355 5743 4608 3409 * * 73 54 4755 * 1000 1000 * * 5165 1243 0 Y 74 3636 * * 5315 * * 6058 2608 * 1643 * 6178 4422 4415 * 5149 4627 2857 * 3622 74 0 * * * * * * 5165 0 0 N 75 4670 * 2873 3344 5433 6668 5493 * 3205 * * 1265 * 5031 5789 3924 5743 6275 * * 75 20 6178 * 1000 1000 * * 5165 1000 0 M 76 1137 * * * * 3249 * 4190 * 5211 4065 * * * * 2764 3611 3846 * * 76 14 6648 * 1000 1000 * * 5165 1000 0 Q 77 6275 * 6302 5033 5834 * 5659 4755 1523 6048 6258 5946 * 4064 3419 * 3352 * 3190 3105 77 0 * * * * * * 5165 0 0 M 78 * * * * 4398 * * 2128 * 4434 3281 * * * * * 3649 1015 * * 78 0 * * * * * * 5165 0 0 H 79 5301 * 4149 5493 5178 * 1066 * 1870 * * 4841 * * 4365 4889 * * * * 79 0 * * * * * * 5165 0 0 I 80 * * * * * * * 1569 * * 2459 * * * * * 6302 1157 * 5659 80 20 6196 * 1585 585 * * 5165 1081 0 L 81 * * 2485 3945 * * 4940 3966 3825 4651 * 2638 * * 4734 * 4121 2727 * 2807 81 47 4973 * 1585 585 * * 5165 1498 0 I 82 5659 * * * 5493 * * 1176 * * 5661 * * * * * * 1157 4404 * 82 79 4226 * 1500 629 * * 5165 2028 0 P 83 3714 * 2696 3352 * * * 6035 5631 * * 5282 990 * * * * 3226 * * 83 38 5253 * 2101 383 * * 5145 1639 0 T 84 3374 * 2821 3375 4513 3368 * 6422 5747 * 5047 5392 2653 5719 5000 2633 4405 5444 * * 84 69 4422 * 1951 432 * * 5145 1940 0 L 85 3914 * * * 3047 * * 1337 * 3241 2073 5599 * 5241 5645 * * 7268 * * 85 34 * 5415 * * * * 5145 0 0 G 86 6357 * 3637 4408 * 1948 4703 5935 3686 5446 * 1492 * 5790 * 3791 * * * * 86 32 5489 * 1000 1000 0 * 5090 1000 1105 Y 87 * * * * * * * * * * * * * * * 4489 * * * 66 87 0 * * * * * * 4889 0 0 D 88 * * 632 5637 * * 2559 * 4261 5631 * 4892 * * 4661 * * 5688 * * 88 0 * * * * * * 4889 0 0 K 89 6310 * * 4256 * 3494 975 * 4597 * * 2449 * 4471 * 5410 * 4489 * * 89 0 * * * * * * 4889 0 0 E 90 5062 * 3681 2803 3905 * 3296 * 2551 * 6429 3802 * 3635 5568 6310 2726 * 4757 5378 90 0 * * * * * * 4889 0 0 F 91 * * * * 4035 * 4192 * * * * * * 4661 * * * * * 243 91 0 * * * * * * 4889 0 0 K 92 * * 1744 5575 5182 * 4509 5164 3643 * * 3314 * 3661 4372 6007 2090 * * 5446 92 0 * * * * * * 4801 0 0 I 93 * * * * 4607 * * 1677 * * * * * * * * 3795 800 * * 93 0 * * * * * * 4801 0 0 Q 94 * * 4908 * * * 3841 * 4899 * * * * 1084 1543 * 4360 * * * 94 17 6414 * 1000 1000 * * 4635 1000 0 F 95 * * * * 1221 * * 2782 * 1422 * * * * * * * 4883 * 5756 95 0 * * * * * * 4499 0 0 E 96 2245 * 3315 2652 4437 * * * 2703 * * * * 3389 5230 3063 4328 4712 * * 96 0 * * * * * * 4400 0 0 V 97 * * * * 564 * * 3261 * 2646 * * * * * * * 4070 * * 97 0 * * * * * * 4284 0 0 N 98 * * 508 * * * * * 4908 * * 1924 * * * * * * * * 98 0 * * * * * * 4185 0 0 M 99 3101 * * 3152 * 4369 * 4211 * 4439 2794 * 3758 2863 * * 2900 2911 * * 99 0 * * * * * * 4109 0 0 R 100 3697 * 4351 * * * 3889 * 3137 * * 1447 4297 * 3808 2296 * * * * 100 0 * * * * * * 3975 0 0 T 101 * * * * * * * * * * * * * * * 881 1434 3521 * * 101 0 * * * * * * 3803 0 0 F 102 3932 * 4050 * 1276 * * 2104 * 2804 3550 * * * * * * * * * 102 0 * * * * * * 3803 0 0 V 103 * * * * * * * * * * * * * * * * * 0 * * 103 0 * * 0 * * * 2211 0 0 //