HHsearch 1.5 NAME c4yk2B_ FAM FILE c4yk2B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4yk2B_.a3m DATE Sat Mar 12 08:30:57 2016 LENG 106 match states, 106 columns in multiple alignment FILT 26 out of 30 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.9 EVD 0.3964 -0.7314 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTHHHHHHHHHCGGGHHHHHHHHHHCGGGTSCCSSCEETTEECHHHHHHHHTHHHHHHHHHHHHH HHHHHC >sa_dssp EDEECEDEDDEBDECBEDCDEDBCDAADCABDDDDCBDECBEDADEDBEDBEEBBECADEDBDECCEBBCDEEEEECDEEBEDADEBBDDABDBADEBBE BBDEBE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCHHHHHHHHCHHHHHHHHHHHHH HHHHHC >ss_conf 9879999999632889999999999988635988999999999995899899999999848865101025440053177799998273899999998999 998629 >Consensus LSxxEixxxixxxxxvqxxxxEIqxwckiVYGNxxiLxxxxexIxxnpxxGexlsxqiaxxPxsxxklAGxxxlGiKnxaRkxAExxxxxLcxAixxYxx xVkqax >c4yk2B_ LSYNEFIRKVVSDHSIQEQEKEIRRLSQIVFGNQNQLANQLSQIHENPSFTKIISNTLTNSPESFAKLAGSKTFGIKNSKRKQAEKNISKLVEAIHKYAD AVENSM >UniRef50_Q6G2A3(443-547:834) BepF protein n=1 Tax=Bartonella henselae RepID=Q6G2A3_BARHE E=2e-11 s/c=0.67 id=36% cov=100% LSNQELADRIRTEPSVLYSQTEVQYWSKIVFGNPYILQYRIEDIQKNPDMGEEFSWQVANNPSLFSPLAGKRILGIKNDARRHAEASLSCLCSAIEGYAD AVKQA- >UniRef50_Q6FYV5(271-370:593) Putative uncharacterized protein n=1 Tax=Bartonella quintana RepID=Q6FYV5_BARQU E=4e-23 s/c=1.08 id=27% cov=95% -----LVNTMEQKLLIDAYQEEIRYWCGMVYGDRLILDERMEEVQKNPALGEQLSREVAENPQSIAQFAGKKMLGLKTKARREAEENFSSLCATLEGYVY TVKYS- >UniRef50_Q5QSZ9(438-547:1009) BepG protein n=2 Tax=Bartonella henselae RepID=Q5QSZ9_BARHE E=2e-15 s/c=0.76 id=27% cov=100% LSYVDVASKIRESEVVKSSKQKIETLCSVVYGNPRILEDKMPKMgipvtNKNVEELEKFARQVGNFPSSCGKIVGFNFLGIKSEARAHAEENFLPLSHAI FSYAHSVKQA- >UniRef50_C6AES9(117-221:276) BepH protein n=1 Tax=Bartonella grahamii as4aup RepID=C6AES9_BARGA E=4e-29 s/c=1.22 id=33% cov=100% LTSEQITVILLKNPHVQAYGEEVMHWGKIVYGNDTLFQQHLQGILTDPSKGKDLSNQLAENPESIHKLAGRSALGLKSQTRKAAEDGFKPLVDAIDGYTK AVKEA- >UniRef50_A9IWP4(319-423:544) BepA protein n=5 Tax=Bartonella RepID=A9IWP4_BART1 E=2e-28 s/c=1.20 id=28% cov=100% LSKTEKAEMIAKDACVHTARNQIQRLSKTVYDNAKTLDKKMVAIIKNPALGQQLAEQIERSPDSVAHLAGFSLCGLQNQARANAKNHLEMLCSAVANFAH AVKHA- >UniRef50_A9IWP7(307-411:532) BepC protein n=4 Tax=Bartonella RepID=A9IWP7_BART1 E=5e-27 s/c=1.16 id=27% cov=100% LTHEALFAKISNDAYVEACRKEIEHLSKTVYGKMQALKTKLDIVTAAPNLGNQFADEILENPQSISKFAGRKILGMKSSNRKYAEQTVPQLCQALKNYGT ITQQA- >UniRef50_Q11MR3(358-459:586) Zeta toxin n=1 Tax=Chelativorans sp. BNC1 RepID=Q11MR3_MESSB E=2e-05 s/c=0.49 id=21% cov=96% LSEAEIGTKLRQSSRLEQKRSEIERLSQLVYGNAAATSATVESI-DGAMAGSVAGQDIRAGKLGPMAGEGGRFLRAESPERQTAKAHLPQLAAAMEDYGR TV---- >UniRef50_C6AET2(786-889:1069) BepI protein n=1 Tax=Bartonella grahamii as4aup RepID=C6AET2_BARGA E=2e-34 s/c=1.40 id=39% cov=99% LTNNEIATKIKNNASIQARRKEIETLCQIIYGNRHILQERIEMIHENHTEGEQLTYQIATSPQSISKLSGSNVFGIKNNARAHAEANILPLCRAIDRYIN IFKQ-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 3680 0 0 S 2 * * * * * * * * * * * * * * * 566 1624 * * * 2 0 * * * * * * 3728 0 0 Y 3 * * * 2324 * * 3198 * 3235 * * 1738 * * 4661 3544 4450 * * 3130 3 0 * * * * * * 3728 0 0 N 4 2861 * 2337 1956 * * * * 3347 * * 3485 * 3211 * * 3977 4389 * * 4 0 * * * * * * 3915 0 0 E 5 4033 * 4389 383 * * * * * * * * * 3011 * * * * * * 5 0 * * * * * * 3915 0 0 F 6 * * * * 4259 * * 968 3373 2263 * * * * * * * 2925 * * 6 0 * * * * * * 3954 0 0 I 7 1494 * * * 3655 3534 * 3059 * 5075 * * * * * 3238 2648 3966 * * 7 0 * * * * * * 3989 0 0 R 8 4229 * 4087 4116 * 5075 5364 4497 5107 4637 * 2974 * * 3523 2659 2359 3882 * 5188 8 0 * * * * * * 3989 0 0 K 9 * * * * * * * 4833 1342 4637 3058 * * 4497 2180 4503 3305 * * * 9 0 * * * * * * 3989 0 0 V 10 * * * * * * * 1384 * 1701 2941 * * * * * * 2482 * * 10 0 * * * * * * 3989 0 0 V 11 4116 * * 3879 * * 4497 * 3955 2717 * * * 1678 2337 4229 * 4332 * * 11 0 * * * * * * 3989 0 0 S 12 * * * 3164 * 5107 3851 * 2138 * * 2699 * 2331 3528 4332 3759 * * * 12 0 * * * * * * 3989 0 0 D 13 * * 1864 5071 * * 3565 * 3879 * * 1531 * * * 2342 * * * * 13 0 * * * * * * 3989 0 0 H 14 2285 * * 3610 * * 4332 5188 * 2864 * * 2222 * * 2550 4636 3773 * * 14 0 * * * * * * 3989 0 0 S 15 * 4116 4636 * * * 4833 * 4497 2347 * * * 4933 3534 1427 * 3610 * 4229 15 0 * * * * * * 3989 0 0 I 16 * * * * 3568 * * 2553 * 2397 * * * * * * * 848 * * 16 0 * * * * * * 3989 0 0 Q 17 * * 5020 2252 * * 4116 * 2987 5071 * * * 985 4637 * * * * * 17 0 * * * * * * 3989 0 0 E 18 1823 * * 2978 * * 4636 * * * * * * 3534 3183 3211 3353 * * 2758 18 0 * * * * * * 3989 0 0 Q 19 3081 3205 * * * 3251 4497 * 3534 * * 4503 * 4332 3363 3163 * * * 2088 19 0 * * * * * * 3989 0 0 E 20 4933 * * 3255 * 4833 3618 * 3742 * 4631 * * 1812 1933 * * 3568 * * 20 0 * * * * * * 3989 0 0 K 21 2693 * * 1840 * * * 4788 2519 * * 4116 * 3172 4742 3534 3989 * * * 21 0 * * * * * * 3989 0 0 E 22 * * * 347 * * * * 3610 * * * * 2925 * * * * * * 22 0 * * * * * * 3989 0 0 I 23 * * * * * * * 519 * * * * * * * * * 1726 * * 23 0 * * * * * * 3989 0 0 R 24 * 5364 * 2046 * * * 4933 3765 * 3962 * * 1289 3088 * * * * 4788 24 0 * * * * * * 3989 0 0 R 25 * * * 4636 4751 * 2005 * 4503 * * 4788 * * 2368 * 2772 * * 1982 25 0 * * * * * * 3989 0 0 L 26 * * * * * * * * * 1087 * * * * * * * * 918 * 26 0 * * * * * * 3989 0 0 S 27 * 701 * * * 4833 * * * * * * * * * 1516 * * * * 27 0 * * * * * * 3989 0 0 Q 28 4637 * * 4503 * 3260 5188 * 1187 * * 4788 * 2072 5107 4590 * * * * 28 0 * * * * * * 3989 0 0 I 29 * * * * * * * 994 3746 3534 5020 4637 * * * * 3171 2688 * * 29 0 * * * * * * 3989 0 0 V 30 3955 * * * * * * 4999 * * * * * * * * 4751 206 * * 30 0 * * * * * * 3989 0 0 F 31 * * * * 2420 * * * * * * * * * * * * * * 299 31 0 * * * * * * 3989 0 0 G 32 * * 3554 * * 249 * * * * * 4788 * * 4742 * * * * * 32 0 * * * * * * 3989 0 0 N 33 * * 2060 * * * * * 4229 * * 500 * * * * * * * * 33 0 * * * * * * 3989 0 0 Q 34 2556 * 3882 4497 * * * * * * 4229 * 1708 3476 2253 4089 * * * * 34 0 * * * * * * 3989 0 0 N 35 3534 5188 5103 * 4742 * 2490 * 4116 2864 * 2898 * 4229 4590 4212 3882 * * 3380 35 0 * * * * * * 3989 0 0 Q 36 1983 * * * * * * 1132 * 4000 * * * 4332 * * 4116 3047 * * 36 0 * * * * * * 3989 0 0 L 37 * * * * 3249 * * * * 307 * * * * * * 3534 * * * 37 0 * * * * * * 3989 0 0 A 38 4332 * 3498 3070 * * * * 2825 * * 3039 * 1449 5188 3534 * * * * 38 0 * * * * * * 3989 0 0 N 39 3534 * 3664 1863 * 4631 4788 * 2610 * * 4332 * 4833 * 3618 4229 4503 * 4163 39 0 * * * * * * 3989 0 0 Q 40 * * * 5107 * * 3157 * 1453 * * * * 3415 1850 * 3029 * * * 40 0 * * * * * * 3989 0 0 L 41 * * * * * * * 2035 * 1971 1705 * * * * * 3974 2937 * * 41 0 * * * * * * 3989 0 0 S 42 3773 4636 4229 980 * * * * * * * * 3610 2867 * 4332 * 4116 * * 42 0 * * * * * * 3989 0 0 Q 43 3398 * 2950 2434 * 3949 * 4229 2589 * 4999 * * 4332 4912 3070 5107 4497 * * 43 0 * * * * * * 3989 0 0 I 44 * * * * * * * 615 * 4497 2782 * * * * * * 2668 * * 44 266 3610 3534 2322 322 * * 3989 1141 0 H 45 * * * * 4335 * 3021 3917 3176 2105 * 3492 * 1898 * * 4042 * * * 45 0 * * * * 0 * 3724 0 1000 E 46 4229 * 2939 1979 * * * * 1684 * * * * 3279 3634 * 3882 * * * 46 0 * * * * * * 3989 0 0 N 47 4229 * 2820 * * 3534 * 3012 5103 * * 822 * * * * * * * * 47 0 * * * * * * 3989 0 0 P 48 3534 * * * * * 4999 * * 5075 * * 439 * 4912 * * 3610 * * 48 0 * * * * * * 3989 0 0 S 49 2401 * 5071 2399 * 5364 * * 3568 * 2722 3021 * * * 2801 3955 * * * 49 0 * * * * * * 3989 0 0 F 50 2584 * * 2285 3668 * * 3978 3882 2243 2618 4503 * * * * * * * * 50 0 * * * * * * 3989 0 0 T 51 * * * * * 279 * 4497 * 3610 * * * * * * 4332 * * * 51 0 * * * * * * 3989 0 0 K 52 * * 4636 633 * * * * 3090 * * 4229 * 4116 * 3534 * * * * 52 0 * * * * * * 3989 0 0 I 53 * * 3962 1817 * * * 4332 3610 * * 4503 * 1515 * * 4636 3534 * * 53 0 * * * * * * 3989 0 0 I 54 3534 * * * 2600 * * 2900 * 702 * * * * * * * * * * 54 0 * * * * * * 3989 0 0 S 55 2076 * * * * 3534 * * * 3041 * * * * * 1142 3955 4742 * * 55 0 * * * * * * 3989 0 0 N 56 * * 3539 4116 * * * * * * * 3561 * 2937 2818 * * * 1202 3955 56 0 * * * * * * 3989 0 0 T 57 * * 2611 2393 * * * * * * * * * 847 4637 * 4332 * * * 57 0 * * * * * * 3989 0 0 L 58 * * * * * * * 1620 * 2023 4637 * * * * * * 1364 * * 58 0 * * * * * * 3989 0 0 T 59 896 * * 3395 * 3610 * * * 4229 * * * * 3534 4077 3526 * * * 59 0 * * * * * * 3989 0 0 N 60 2348 * * 1814 * 4497 * * 4751 * * 1861 * * 4116 4631 3955 * * * 60 0 * * * * * * 3989 0 0 S 61 * * 3777 * 3082 3534 2725 * 4751 * * 1773 * * * 2541 * * * 3839 61 0 * * * * * * 3989 0 0 P 62 * * * * * * * * 3534 * * * 251 * * 3765 * * * * 62 0 * * * * * * 3989 0 0 E 63 * * 4116 2047 * * 5261 * 4913 3534 * * * 1751 * 3163 2776 * * * 63 0 * * * * * * 3989 0 0 S 64 * * * * 3684 2939 * 4788 * 3897 * * * * * 539 * * * * 64 0 * * * * * * 3989 0 0 F 65 4636 4590 * * 1538 * * 1802 * 4637 * * 3534 * * 4503 * 3102 * * 65 0 * * * * * * 3989 0 0 A 66 1647 * * * * 3034 2177 * * * 3534 * * * * 2226 4742 * * * 66 0 * * * * * * 3989 0 0 K 67 3534 * * * * * 4116 * 726 * * * 3275 5020 3093 * * * * * 67 0 * * * * * * 3989 0 0 L 68 * * * * 2788 3534 * 4590 * 638 * * * * * * * 4631 * 4497 68 0 * * * * * * 3989 0 0 A 69 382 * * 3534 * * * * * * * * * * * 3256 * 4590 * * 69 0 * * * * * * 3989 0 0 G 70 * * * * * 0 * * * * * * * * * * * * * * 70 0 * * * * * * 3989 0 0 S 71 * * * * 2841 3534 4131 * 2579 * * 5107 * 4636 1737 2834 4637 * * * 71 0 * * * * * * 3989 0 0 K 72 * * * * * * * * 1686 * * 2258 * 3133 3107 2279 4503 * * * 72 0 * * * * * * 3989 0 0 T 73 3882 * * * 2234 * * 3020 * 3526 2667 * * * 4912 * 3277 2212 * * 73 0 * * * * * * 3989 0 0 F 74 * 2637 * * 2333 * * * * 642 * * * * * * * * * * 74 0 * * * * * * 3989 0 0 G 75 * * * * * 130 * * * * * * * * 3534 * * * * * 75 0 * * * * * * 3989 0 0 I 76 3534 * * * 4637 * * 1028 * 1947 4229 * * * * * * 3825 * * 76 0 * * * * * * 3989 0 0 K 77 * * * 3534 * * * * 224 * * * * 4116 * * * * * * 77 0 * * * * * * 3989 0 0 N 78 * * * * * * * * * * * 990 * * * 1420 3026 * * * 78 0 * * * * * * 3989 0 0 S 79 * * 5071 3233 * 3689 * * 3966 * * 2946 2551 2739 3565 2413 * * * * 79 0 * * * * * * 3989 0 0 K 80 657 * 3568 3534 * * * * 4332 * * 4229 * * * * 3441 * * * 80 0 * * * * * * 3989 0 0 R 81 * * * * * * * * * * * * * * 0 * * * * * 81 0 * * * * * * 3989 0 0 K 82 2549 * * * * * * * 1337 * * * * 3534 1672 * 4912 * * * 82 0 * * * * * * 3989 0 0 Q 83 3882 * * 3541 * * 1982 * 3558 * * 3460 * 2349 * * 2575 * * 4229 83 0 * * * * * * 3989 0 0 A 84 0 * * * * * * * * * * * * * * * * * * * 84 0 * * * * * * 3989 0 0 E 85 * * * 224 * * * * 2796 * * * * * * * * * * * 85 0 * * * * * * 3989 0 0 K 86 1702 * 3159 1357 * * * * 4332 * * 4116 * 4229 * 5075 * * * * 86 0 * * * * * * 3989 0 0 N 87 4788 * * * * 1466 2796 * * * * 1736 * * * 3897 3467 * * * 87 0 * * * * * * 3989 0 0 I 88 * * * * 1581 * * 2503 * 1311 * * * * * * * 4229 * 4913 88 0 * * * * * * 3989 0 0 S 89 * * * 4116 * 4636 * * 3882 2477 5103 4503 2287 * * 1409 * * * * 89 0 * * * * * * 3989 0 0 K 90 3768 5071 * * * * 3279 * 4332 * 4116 * 1759 2840 * 2398 4020 * * * 90 0 * * * * * * 3989 0 0 L 91 * * * * * * * * * 0 * * * * * * * * * * 91 0 * * * * * * 3989 0 0 V 92 3534 848 * * 4503 * * 4497 * * * * * * 4913 3610 * 3090 * 4751 92 0 * * * * * * 3989 0 0 E 93 2362 * 2515 4332 * * 3610 * * * * 3599 * 3601 3955 2682 3765 4637 * * 93 0 * * * * * * 3989 0 0 A 94 159 * * * * * * * * * * * * * * * 3262 * * * 94 0 * * * * * * 3989 0 0 I 95 * * * * 3568 * * 872 * 2467 3534 * * * * * 4497 4116 * * 95 0 * * * * * * 3989 0 0 H 96 4116 * 1709 1507 4590 5107 4332 * 3463 * * 4913 * * * * * 4631 * * 96 0 * * * * * * 3989 0 0 K 97 * 4912 2431 * * 2307 4788 * 3415 * * 2257 * * 3806 2811 5261 * * * 97 0 * * * * * * 3989 0 0 Y 98 * * * * 3398 * 3568 * * * * * * * * * * * * 285 98 0 * * * * * * 3989 0 0 A 99 1512 * * * * 2791 * 3924 * * * * * * * * 1821 2681 * * 99 0 * * * * * * 3945 0 0 D 100 * * 2068 3677 * * 2350 * 3297 * * 4048 * * 3505 5020 3282 * * 3275 100 0 * * * * * * 3945 0 0 A 101 1404 * * * * * * 2384 * * * 4521 * * * 4482 1547 * * * 101 0 * * * * * * 3866 0 0 V 102 4583 * * * 3858 * * 4646 * 4828 * * * * * * 4097 404 * * 102 0 * * * * * * 3866 0 0 E 103 * * * 3223 * * * * 507 * * * * 3944 4786 * 3509 * * * 103 0 * * * * * * 3585 0 0 N 104 * * 4358 4404 * * 3698 * * * * 3862 * 568 * * * * * 3582 104 0 * * * * * * 3558 0 0 S 105 393 * * * * * * * * * * * * * * 2069 * * * * 105 0 * * * * * * 3341 0 0 M 106 * * * * * * * * * * 0 * * * * * * * * * 106 0 * * 0 * * * 1000 0 0 //