HHsearch 1.5 NAME c4xtbA_ FAM FILE c4xtbA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4xtbA_.a3m DATE Sat Sep 19 08:11:39 2015 LENG 109 match states, 109 columns in multiple alignment FILT 21 out of 25 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.2 EVD 0.4008 -0.4931 SEQ >ss_dssp CCEEEEETTEEEEEECCTTCSSCEEEECCTTTCBHHHHHHHHHHHCTTCCCEEEECTTSCBCCTTSBHHHHTTSCEEEEETTEEEEECCCCCCSGGGGGT TCCTTCCCC >sa_dssp EBDBEBDECCABABAEBDEDEECCEBDAEAEECBAADABECADECBECBEDBAACCDEDEECEDECCABEBADECACABACEEECCAEBDEDEDECBEEC DEEEEEEEE >ss_pred CEEEEEECCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCH HHHHHHCCC >ss_conf 9899983890489985489887148996243777999999987324571079998689857026521778635883799615377403898656554263 544310139 >Consensus xixvxyxxGlPxltvpLPSRxExCqFtlkPixxtVgdxlxxixxEDxGIxxvaixsxdGxriaxstxixxLLxddFxLxINDxxyxVxxPxxxxxxxexx xxLxdvkxL >c4xtbA_ MVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENA ATLNDVKTL >UniRef50_UPI0000DA2168(140-247:416) PREDICTED: similar to CG18769-PB, isoform B n=1 Tax=Rattus norvegicus RepID=UPI0000DA2168 E=8e-23 s/c=0.99 id=46% cov=100% -ITVNYRHGLPFVTLTLPSRKERCQFVVKPMLSTVGSFLQDLQNEDKGIKTAAMVTADGSEIPAATLMDTLLMKDFKLVINNLPYDIRRHEKERPSEEHR TQLENTKCL >UniRef50_UPI00017924E6(79-186:396) PREDICTED: similar to AGAP006330-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017924E6 E=3e-36 s/c=1.41 id=46% cov=100% -IHVELRRGLPTVTVPLPSRRELCQFTLRPVTNTVGDLTNMLKTEDPGVDRVVISSSEGVRIASSNTIESLMEDDFRLTINDREFTVKVPPHKKLTKEEL ERLSGVRTL >UniRef50_UPI00017B1DFD(46-149:323) UPI00017B1DFD related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B1DFD E=1e-35 s/c=1.44 id=46% cov=96% --SLKYRYGRLVLEVPLPSRKEKCRFFLQPMLMSVGDLIADMQREDPGVS-ASVFSQDGQRVANTTLIDTLLDKDFQLIVNDDVYDVKSPERACVSGEHA AGLEDVK-- >UniRef50_UPI00019247FA(121-227:394) PREDICTED: similar to coiled-coil domain containing 109A n=2 Tax=Hydra magnipapillata RepID=UPI00019247FA E=4e-35 s/c=1.38 id=44% cov=99% --SCIYRNGFAVFTLPLPSRQENCQFSLRPVSQNVKDLVSFIQEEDKGVDRVVVYSMDGTRIANATPIDMLIQQNFKIKINDKLFDIVPPKPENFPIVPT ETLSNVKSL >UniRef50_Q21121(51-159:333) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q21121_CAEEL E=4e-33 s/c=1.29 id=40% cov=98% -LSIRFEYGLPLLDVPLPSRNEPCQFTMRPLSDTIGSLCEFLRQEDRGIDYVAVYGTNGVKLATCTSIEHLLQfGSFRLRLNDKFFDVTVPKTGTMPYDS dkLRQLDDLR-- >UniRef50_C3KID3(45-149:318) Coiled-coil domain-containing protein 109B n=1 Tax=Anoplopoma fimbria RepID=C3KID3_ANOFI E=8e-31 s/c=1.28 id=38% cov=96% ---VRYCFGRPVLSLRLPA-GQQSRFTLTPMLTTVGDLLSDITAKDPGVQTATIFNRDGQRISSCTFMETVLNDDFQLVINDVTHNVDSLGQG-SSHEHV LGLDDMKYM >UniRef50_D0NKN4(46-151:432) Transmembrane protein, putative n=2 Tax=Phytophthora infestans T30-4 RepID=D0NKN4_PHYIN E=2e-08 s/c=0.57 id=29% cov=82% -IELKYHDGTCTLAVPLPLSGfdEERVFSIPP-ETTVADIIAQIEAEDKSVQSVSIRSARGEEFQPEDTLQKVLTDDFELLLNDQVLPVRAP-------- ----------- >UniRef50_C1LZM1(39-146:332) Putative uncharacterized protein n=1 Tax=Schistosoma mansoni RepID=C1LZM1_SCHMA E=8e-32 s/c=1.28 id=41% cov=100% -VSVYSENGLPKIIIPLPSRREACSFVLKPLQHTVGDLSNFIKCEDSGVDRITFFSKDGTRIAKSNSISDLLTSDFHILINDQQYHVDTSSISSQFSVLP KDLANVREL >UniRef50_A8NQE4(53-149:178) Chromosome 10 open reading frame 42, putative n=1 Tax=Brugia malayi RepID=A8NQE4_BRUMA E=4e-30 s/c=1.36 id=47% cov=89% ------QSGLPLLEVPLPSRREICQFTLKPISDTVSRFCKNIECEDKGIEIVYVYSTSGNRIAGSTLLKHLLLrGNFRLRINDFIYTVEVPSSKDVIAHS VTG------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 V 2 * * * * * * * 1150 * 3687 * * * * * * * 1084 * * 2 0 * * * * * * 2967 0 0 T 3 * * * 3042 4732 * 4473 * * * * * * 4084 * 1525 1739 4226 * 4782 3 0 * * * * * * 3084 0 0 V 4 * 3206 * * * * * 3198 * 2345 * * * * * * * 771 * * 4 0 * * * * * * 3191 0 0 V 5 * * 3466 2261 * * 4207 3278 2634 * * 4366 * * 2653 * 4418 4025 * 3904 5 0 * * * * * * 3191 0 0 Y 6 * * * * 3104 * * * * 4536 * * * * * 3904 * * * 370 6 0 * * * * * * 3191 0 0 Q 7 * 3876 * 3044 * * 2680 4863 4359 * * 4491 * 2387 2062 * * 3376 * * 7 0 * * * * * * 3221 0 0 N 8 * * 3318 * 3876 * 2970 * 4491 * * 1597 * * 3019 3391 * * * 3181 8 0 * * * * * * 3221 0 0 G 9 * * * * * 0 * * * * * * * * * * * * * * 9 0 * * * * * * 3221 0 0 L 10 * * * * 3264 * * * * 811 3262 * * * 3042 * 3318 * * * 10 0 * * * * * * 3221 0 0 P 11 4174 3318 * * * * * * * 4230 * * 338 * * * * * * * 11 0 * * * * * * 3221 0 0 V 12 * * * * 4407 * 2936 * 3959 2775 * * * * 4165 * 2394 1451 * * 12 0 * * * * * * 3221 0 0 I 13 * * * * 4174 * * 1802 * 1292 3839 * * * * * * 2478 * * 13 0 * * * * * * 3221 0 0 S 14 3318 * 4134 3324 * * * 3959 * 4358 * * * * * 2552 1122 * * * 14 0 * * * * * * 3221 0 0 V 15 * * * * * * * 3959 * 1993 * * * * * * * 547 * * 15 0 * * * * * * 3221 0 0 R 16 * * * * * * * * * * * * 639 * 2322 5047 2970 * * * 16 0 * * * * * * 3221 0 0 L 17 * * * * * * * * * 0 * * * * * * * * * * 17 0 * * * * * * 3221 0 0 P 18 * * * * * * * * * * * * 0 * * * * * * * 18 0 * * * * * * 3221 0 0 S 19 3876 * * * * * * * * 3318 * * * * * 266 * * * * 19 102 * 3876 * * * * 3221 0 0 R 20 * * * * * * * * * * * * * * 170 3169 * * * * 20 0 * * * * 0 * 3150 0 1000 R 21 * * * * * 2570 * * 2807 * * 2414 4165 3324 1534 * * * * * 21 152 3318 * 1000 1000 * * 3221 1000 0 E 22 * * * 102 * * * * * * * * * 3876 * * * * * * 22 0 * * * * * * 3221 0 0 R 23 3959 * * 3318 * * * 4424 3197 2067 * 4174 4134 3876 1940 * * * * * 23 0 * * * * * * 3221 0 0 C 24 * 266 * * * * * * * * * * * * 3318 3876 * * * * 24 0 * * * * * * 3221 0 0 Q 25 * * * * * * * * 4491 * 4165 * * 796 2649 3959 * 3318 * * 25 0 * * * * * * 3221 0 0 F 26 * * * * 0 * * * * * * * * * * * * * * * 26 0 * * * * * * 3221 0 0 T 27 2813 * * * 4230 * * * * * * * * * * 2684 1015 2700 * * 27 0 * * * * * * 3221 0 0 L 28 * * * * * * * 3318 * 484 4134 * * * * * * 2970 * * 28 0 * * * * * * 3221 0 0 K 29 * * * * * * * * 985 * * * 3318 4230 1872 * 3876 * * * 29 0 * * * * * * 3221 0 0 P 30 * * * * * * * * * * * * 0 * * * * * * * 30 152 * 3318 * * * * 3221 0 0 I 31 * * * * * * * 1767 * 2356 2095 * * * * * 4593 2087 * * 31 0 * * * * 0 * 3299 0 1000 S 32 4491 * * 3318 * * * * * 2006 * * * 3959 * 1586 2259 * * * 32 0 * * * * * * 3221 0 0 D 33 * * 2631 3358 * * 2359 * * * 4230 4602 * 3169 * 2898 2277 * * * 33 0 * * * * * * 3221 0 0 S 34 * * * * * * * * * * * 2558 * * * 2424 635 * * * 34 0 * * * * * * 3221 0 0 V 35 * * * * * * * 4134 * * * * * * * * * 85 * * 35 0 * * * * * * 3221 0 0 G 36 3318 * * * * 417 * * 3264 * * * * * * 4424 * * * * 36 0 * * * * * * 3221 0 0 V 37 4718 * 621 * * * * * * * * 4040 * * 4424 2770 * 4111 * * 37 0 * * * * * * 3221 0 0 F 38 * * * * 1132 * * 3318 * 1173 * * * * * * * * * * 38 0 * * * * * * 3221 0 0 L 39 * 3271 * * * * * 2306 * 907 * * * * * 3959 4602 4174 * * 39 0 * * * * * * 3221 0 0 R 40 2422 * 3605 3242 * 4718 * * 4424 * * 3245 * 2605 3711 2641 4863 * * * 40 0 * * * * * * 3221 0 0 Q 41 * * 2006 * 2501 * 4358 4165 * * 2541 3391 * 2661 * 4491 * * * * 41 0 * * * * * * 3221 0 0 L 42 * * * * * * * 1080 * 1234 4230 * * * * * * 4359 * * 42 0 * * * * * * 3221 0 0 Q 43 * * * 2768 * * * * 1601 * * * * 1922 2385 * 3876 * * * 43 0 * * * * * * 3221 0 0 E 44 2110 3173 5243 2248 * * * * * * * 2853 * 2741 4230 * 3659 * * * 44 0 * * * * * * 3221 0 0 E 45 * * * 102 * * * * 3876 * * * * * * * * * * * 45 0 * * * * * * 3221 0 0 D 46 * * 0 * * * * * * * * * * * * * * * * * 46 0 * * * * * * 3221 0 0 R 47 * * * * * 3358 * * 1600 * * * 2195 * 1786 3959 * * * * 47 0 * * * * * * 3221 0 0 G 48 4165 * * * * 245 * * * * * * * * * 3318 * * * * 48 0 * * * * * * 3221 0 0 I 49 * * * * * * * 933 * * * * * * * * * 1070 * * 49 0 * * * * * * 3221 0 0 D 50 * * 1149 2457 * * * 4165 3480 * * * * 2570 * 4230 * * * * 50 79 * 4230 * * * * 3221 0 0 R 51 * * 4061 * * * * 4358 * * * * * * 1109 3229 1936 * * 4063 51 0 * * * * 0 * 3189 0 1000 V 52 1059 * * * * * * 3959 * * * * * * * * * 1134 * * 52 0 * * * * * * 3221 0 0 A 53 1087 * * * * * * * * 4491 * 4165 * * * 2703 2917 3372 * 4424 53 0 * * * * * * 3221 0 0 I 54 * * * * 3959 * * 1124 * * 4407 * * * * * 4718 1352 * * 54 0 * * * * * * 3221 0 0 Y 55 * * * * 1909 * * 3262 * 5243 * * * * 3318 4602 4165 4407 * 1479 55 0 * * * * * * 3221 0 0 S 56 * * 4359 * * 4134 * * * * * 2014 * * * 964 2898 * * * 56 0 * * * * * * 3221 0 0 P 57 2183 * 4358 4718 * * * * 2569 * 4174 * 3711 4230 3403 4602 2295 * * * 57 0 * * * * * * 3221 0 0 D 58 * * 872 4602 * * 3890 * * * * 2741 * * 3318 3391 * * * * 58 0 * * * * * * 3221 0 0 G 59 * * 4358 * * 72 * * * * * * * * * * * * * * 59 0 * * * * * * 3221 0 0 V 60 * * * 3318 * * * * * * * 3489 * 3042 * 2487 2738 1470 * * 60 0 * * * * * * 3221 0 0 R 61 * * * 2762 * * * * 3241 * 4556 * * * 506 * * * * * 61 0 * * * * * * 3221 0 0 V 62 * * * * 3318 * * 779 * 4134 4165 * * * * * * 2291 * * 62 0 * * * * * * 3221 0 0 A 63 738 * * * * 4165 * * * * * * 3554 3318 * 2650 * * * * 63 0 * * * * * * 3221 0 0 A 64 1969 * * * * 3391 * * 3959 * * 3202 3318 * 4358 1888 4134 * * * 64 0 * * * * * * 3221 0 0 S 65 3286 2999 * 3318 * * * * * * * * * * * 829 3197 * * * 65 0 * * * * * * 3221 0 0 T 66 * 2936 3318 * * * * * * * * 2633 * * * * 718 * * * 66 0 * * * * * * 3221 0 0 G 67 * * * * 3876 4111 * * 4359 2136 * * 4174 4491 4165 2348 2025 * * * 67 0 * * * * * * 3221 0 0 I 68 * * * * * * * 716 * 2768 2353 * * * * * * 4359 * * 68 0 * * * * * * 3221 0 0 D 69 4491 * 1357 1499 * * * * 4424 * * * * 3318 * 3959 * * * * 69 0 * * * * * * 3221 0 0 L 70 * * 3959 * * * 2756 4556 3318 4111 4174 * * * 4863 3170 1996 2884 * * 70 0 * * * * * * 3221 0 0 L 71 * * * * * * * * * 366 4165 * * * * * * 2570 * * 71 0 * * * * * * 3221 0 0 L 72 * * * * * * * 4174 * 359 2599 * * * * * * * * * 72 0 * * * * * * 3221 0 0 L 73 * * 2666 3887 * * * * 4359 2642 2970 3151 * 3154 4358 * 2603 * * * 73 158 3271 * 0 * * * 3221 1432 0 D 74 * * 1005 * * 3271 * * 3316 * * 2952 * 4174 * 3145 * * * * 74 0 * * * * * * 3221 0 0 D 75 * * 750 4863 * * * * * * * 2730 4358 * * 2894 4763 * * * 75 0 * * * * * * 3221 0 0 F 76 * * * * 0 * * * * * * * * * * * * * * * 76 0 * * * * * * 3221 0 0 K 77 * * * 3494 * * 3841 * 1726 * * 4101 * 3029 2694 2672 * 4410 * * 77 0 * * * * * * 3513 0 0 L 78 * * * * * * * 2089 * 387 * * * * * * * * * * 78 0 * * * * * * 3513 0 0 V 79 * * * * * * * 2806 3254 2657 * * * 3736 2663 * 3671 1825 * * 79 0 * * * * * * 3513 0 0 I 80 * * * * * * * 324 * 2762 * * * * * * * 4220 * * 80 0 * * * * * * 3513 0 0 N 81 * * * * * * * * * * * 0 * * * * * * * * 81 0 * * * * * * 3513 0 0 D 82 * * 411 4339 * * 4944 * 4554 * * 3019 * * * * * * * * 82 0 * * * * * * 3513 0 0 L 83 * * 3278 * 4328 * * 4554 2517 3698 * * * 2282 2376 * * 2694 * * 83 0 * * * * * * 3513 0 0 T 84 4500 * * 3289 4046 * * 4275 * 4073 * * 4335 3802 * 3627 1862 2289 * * 84 0 * * * * * * 3486 0 0 Y 85 * * * * 2580 * 3823 * * 2948 4542 * * * * * * * * 762 85 0 * * * * * * 3486 0 0 H 86 * * 1305 4542 * * 2895 * * * * 3823 2744 * 4307 * 2762 * * * 86 0 * * * * * * 3486 0 0 V 87 * * * * * * * 2667 * * * * * * * * * 247 * * 87 0 * * * * * * 3486 0 0 R 88 * * 2374 4275 * * * * 2666 * * 2928 * 4500 2043 4066 4046 4073 * * 88 0 * * * * * * 3486 0 0 P 89 3481 4500 * * * * * * * * * * 1306 * 4335 2989 3802 2221 * * 89 0 * * * * * * 3486 0 0 P 90 * * * * * * 4335 * * 3823 * * 307 * * 3802 * * * * 90 0 * * * * * * 3486 0 0 K 91 * * 4105 2563 * 3649 * * 1553 * * * 3024 * * 2437 * 4489 * * 91 0 * * * * * * 3265 0 0 R 92 * * * * * * 4259 3712 3320 4258 * * 2895 3649 1878 3206 3005 * * * 92 0 * * * * * * 3265 0 0 D 93 4026 * 2115 2292 * 2774 * 3822 2715 * * * * * * 3712 * 4105 * * 93 120 * 3649 * * * * 3265 0 0 L 94 3993 3834 4079 3714 4138 * * * 1642 3740 * 3895 * * 4061 3630 3800 * * * 94 84 * 4138 * * 0 * 3173 0 1000 L 95 * * * * 3858 * * 3169 3758 2122 3829 * 3173 3630 * 3595 * 2545 * * 95 0 * * * * * 0 3231 0 1000 S 96 4015 * * * 3630 * * 3128 * * * * 2229 * * 1407 2711 * * * 96 0 * * * * * 0 3231 0 1000 H 97 4071 * * 3050 * 3976 2680 3858 2955 4371 * 4265 * * * 2457 * 4341 * 3829 97 0 * * * * 0 * 3231 0 1000 E 98 * * 3005 673 * * 4170 * 4244 * * * * * * * * 2836 * * 98 0 * * * * * * 3265 0 0 N 99 * * 2616 4259 * * 1782 * * 3712 * 2848 3972 * * 2218 * * * * 99 99 3912 * 1000 1000 * * 3265 1000 0 A 100 2143 * * * * * * * * 2401 3428 * 3712 4105 4169 * 2591 2886 * * 100 0 * * * * * * 3265 0 0 A 101 2798 * 3428 3108 * * * * 2959 3649 * * * * 2356 4244 2388 * * * 101 0 * * * * * * 3265 0 0 T 102 * * 3712 3411 * 2346 * * 3428 * * * * 2375 4259 3173 2441 * * * 102 0 * * * * * * 3265 0 0 L 103 * * * * * * * * * 319 3323 * * * * * * 3345 * * 103 0 * * * * * * 3226 0 0 N 104 2783 * 1907 2174 * 3345 * * * * * 3782 * 3775 * 3030 * * * * 104 0 * * * * * * 3226 0 0 D 105 * * 822 4144 * 4168 3076 * * * * 2296 * * * * * * * * 105 0 * * * * * * 3226 0 0 V 106 * * * * * * * * * 2786 2892 * * * * * 4121 593 * * 106 0 * * * * * * 3226 0 0 K 107 * * * * * * * * 686 * * * * 3775 1712 * * * * * 107 0 * * * * * * 3226 0 0 T 108 * 2574 * 3346 * * * * * * * * * * * 1459 1931 * * 3213 108 0 * * * * * * 2991 0 0 L 109 * * * * * * * * * 293 2445 * * * * * * * * * 109 0 * * 0 * * * 2991 0 0 //