HHsearch 1.5 NAME c4xc8B_ FAM FILE c4xc8B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4xc8B_.a3m DATE Sat Feb 14 08:32:43 2015 LENG 1060 match states, 1060 columns in multiple alignment FILT 92 out of 96 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.3372 -8.0047 SEQ >ss_dssp CCSSCCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEECCSSCCHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHTTCTTSEEEEECTTSSCH HHHHHHHHHTCSEECCHHHHHHHCHHHHHHHHHHHTCCCCTTSSCSSTHHHHHTCHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHCCCEEEEEESTTSS HHHHHHHHHHHHHHHHTTCCCEEEEEEECCCTTTSCEECCSGGGCSSCCSTTEEEEEEECCSSSCSSCTTHHHHHHHHHHTTCSEEEEEEEECCSSCCCS GGGCSEEEEEECSCCSSGGGGGTCGGGGTCSEEEECCTTSTTHHHHHHHHHHHHHHHTTCTTSCGGGSSEEECCTTSTTCHHHHHHHHHHHHHHHTTTCC CCCCSSCCCCCSBCCCTTCSSCGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCTHHHHHHHHHHHHSCHHHHHHHHHHHHHHH HTTSSBCCCCCCBCEEECSSCCEEESSCCCCCCCHHHHHHHHHHSCSTTSTTCTTCSSSSCCCSCCCCCEEECCBSHHHHHHHHHHHTSSCSCEEEEEEB CHHHHTTCCCCSSHHHHTTTTTTSBCCCSHHHHHHHTTTSCTTSTTEEEEEECCTTHHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHC CEEECCCHHHHHHTTCCCSBCHHHHHHHHHHHHHHHHHTTCCSEECEEEECHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHGGGEEEEEECC SSGGGGGHHHHHHHHHHHHHHHTSCCCHHHHCCEEEEECCSTTCCSSSGGGHHHHHHHHHHHHHHTTCSEEECCCTTTTSSCCCTTHHHHHHHHHHHHHH TCSGGGSSCTTTTCHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSSCCBTTTBSCCTTCCCCCCSCHHHHHHHHHH HHHHHHHTTTHHHHHHHHHHHHHHTTCCHHHHHHHHTTTSCHHHHHHHHHHTTTBCCCCC >sa_dssp ECECCABAAAAABBBACDCDCBCDBBDCABDCAAAAABBABCBBACCABDAABBAAABAABABADECDBBDBACCABDCADEDCAEBBCAABCBDEDBDE ECBCDADEDDBCCABCDDBCEECCDDCCBCCBBEDACCCACEDCCEDBEDADEDDCBBAABAABBBBCEECEEECCEDADEDBDEDEBBAAAAAACEEAC BBCAAABAABBABCBBECDBCAAAAAACDCEEECCABDACBBBCBBABDCECBAAAAAAACDEECBBADBADCABBAACBACADAAAAAABDBDDEDCCA CEDBDABABABCBECDDDDCAEEBDABEDBDBAAABCBDDEDBDDACDCAADBBBDCDEDEEDECDDACABAAAADBBCACAABBAACCACECADEDEBE CDEDEBDEDEDCDBECDCDBBCEECCDAABDAAECACDBCEDBEDBBECACCBCDCCDDBEEDDEEEEEDEDCCEDADECCEDACEEBDCCBEDBEECDC CBDDEECEEECCDBCCEDEEEECCCCBDBCEDECCADBADBABBABAACCCABABABEDBCDDEDDEECBDBCCBBADCABEEADEDAEEDDDCCBCADB ACAADBACBBDECDAABCBBBCEAAAAAAADAACCAAEEBCABCEDBCACADABAAABAAAAAAABAABBBCCEDCBEEEECEBDEEDDDCCCDDAADDA DBCBBAABAABBBCCBCBBBCBCABBBBBBABBDBADECEBCCADBABAAABCABCCBBDBCAAAAAAAAAAAAAABBACDDEBEBCDAABBBCACAAAB DDECBCAAAAAAAAAAAAAADDCBEBDEDABCACACACABCCBBBDCCCECACEBADDAACCABCBBCDDCDBAABBDDEDDDDEDADECBDDBCEDBDE EDDDCCBBBCBBDDEEBCEBADEBBCCAADAACDAAEDDAACCABDEBBACDCBCEBCEECDECCEEDEDEBDBBCDEEDEECDEEEDBDDECBDCACEC BEEBCDECEEEBEECBDDACDBBCDDECAADBAADAADBAAABCAADBABCBBACBBBDE >ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEECH HHHHHHHHHCCCEECCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCC HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH HHHCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEHHHHCCCCHHHHHHHHHHHHHHCCCC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HHCCCCEEEEECCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEE CHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECC CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >ss_conf 9888448887301136614789999999985798299962767489999989755864456302255068999999999986286621798538721246 8999999603010106011012898899999987436764566788878984256236999998885355531056753023677750289861778887 3467999999997304788558999866788776753210005620258998689852000121342156888999987349528999605778652456 5213526888548878478887744531031424400013795899999999986104202689300962120044524766899999999999860264 3333112476433345430028889437889876456689999879999999998999999740276115669999876120015667999864499998 4216834898426336531487143232477678778999997279996267544778532158435665636899899999999997489865202332 0023206787746111102034673005689999974485166666300011277268999999998633221000011244444332223366768770 5721430447886369856882278999999999997437877304646510024259998999999999799999999976999878650038998548 6199999999999999999987709984333103778745752000271010788999999877378753002754233348998999999999999999 7198876682122289999999999999999999997485799986073889999999999974303884488341266888677623784688778899 998762006789999999998530786318999999964149999998998401223069 >Consensus xxxxxxrxxtaxxlfdghdaainixrrxxqxxgxevihlgxxrsvxevvxxaxqedxxxiaxssyqgghxexfxyxxxxlxxxgxxxixvfgggggxixx xexxxlxxxgvxxixxxxxgxxxxlxxmixdxxxxxdxxxxxxxxxxxxxxxxgxxxaxaxxisxxExxxxxxxxxxxxxxxxxxxxxxviGiTGxgGaG KStLxdelxrxxxxxxxxxxxvxvxavDPSxxxtgGAlLGDRirmnxxxxxxvxxRSlATRxxxxxlsxxxxxxvxxlxxxgfDlviiETxGiGQxdxxi xxxxdxslxvmtpxxGxxxQlxKixmldxAdxvvvNKxDxxgaxxaxrdvxxqxxrxxxxxxxxxxxxpVxxtxAsxxndxGxxxlxxxlxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxyxxxxxxxxxxxxxxxxxxxxxxxxxxxlxxxxxxxxxxxxxxxxxxxxxxxxxxxlxxxxxxxxxxxxxxxx xxxxxxxxxixxxxxxxxlsxxxxxxvxxpxxxxxxxixxxxxxexlPGqxPfTRGxypxxyxgxxwTRqfaGxgtpeetNxrxkxLaxGxxxxgLsvAF DlxTxxGxDpDxxPxaxGeVGxxGVaIxSldDmxxLldGIdLxxxxxsVsmTiNgpAxxllAxxlxvAxxqxxxxxxxxxGxxxxxxxxxxxxGxxlxkL rGTvqaDiLkExxargtxifplexslrlmaDxxxyxxxxxxPxxxtISVsGyHixEAGAsavQELAftLAxGvaYlraxxxrGLdvDexaprlsFxfsxg xdxfxeiakRAaRrLWArixkExfGaxxxsxxlrxHaxTSgxslTxqDPxnNiLRtTieafAAvvGGadSlxxxpfDEalglPtxfSrRiArNtQlILxe EsgLxxVxDPagGSyyVExLTdxLaeaAwaxFqeIExxGGmvaALesGxiqxxIxesaxxrxxxixxgxxxIVGVNxfxxxxexpxxxxxxxxxxxqxxr lxxxkxrxaxxxxaALaxLxxAaxxxxNvxxxlidAvkxaTlGEIxxaLreVxGxyrrxx >c4xc8B_ GPANKVRFVTAASLFDGHDASINIMRRILQSQGCEVIHLGHNRSVQEVVTAALQEDVQGIAISSYQGGHVEYFKYMIDLLREHGGEHIQVFGGGGGVIVP DEIRELQAYGVARIYSPEDGQRMGLAGMITDMAQRCDIDLTRYAPTTLDTVVAGDRRALAQLITALENGKADPELVSALHAQAKAAAVPVLGITGTGGAG KSSLTDELIRRFRLDQDDALSIAVISIDPSRRKSGGALLGDRIRMNAINHPNIFMRSLATREAGSEISQALPDVIAACKAARFDLVIVETSGIGQGDAAI VPHVDLSLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAQDAWRDVAKQVQRNREQWHSRAEDMPVYGTQASRFNDDGVTMLYQGLVGALGARGMS LKPGTLPNLEGRISTGQNVIVPPARSRYLAELADTVRAYHRRVVAQSKLARERQQLRAAHDMLQGAGHESAALETLASERDVSLGAVERKLLAMWPQMQQ AYSGDEYVVIRTGLISTTLSGTKIRKVVLPRFEDEGEILKWLMRENVPGSFPYTAGVFAFKREGEDPTRMFAGEGDAFRTNRRFKLVSEGMEAKRLSTAF DSVTLYGEDPHERPDIYGKVGNSGVSIATLEDMKVLYDGFDLTNPSTSVSMTINGPAPTILAMFMNTAIDQQIDRFRADNGRDPTADEEAKIRAWVLQNV RGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQEYFVHHQVRNFYSVSISGYHIAEAGANPISQLAFTLANGFTYVEAYLARGMHIDDFAPNLSFFFSNG MDPEYSVLGRVARRIWAVTMRDKYGANDRSQKLKYHIQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAYDEAITTPTAESVRRALAIQLIINR EWGVAKCENPNQGSFLIEELTDLVEEAVLQEFERIAERGGVLGAMETGYQRGKIQEESLYYEQLKHDGTLPIIGVNTFRNPNGDPLARSSEDEKQSQLHR LTEFHGAHQADAEAMLARLRQAVIDNRNVFAVLMDAVRVCSLGQITHALFEVGGQYRRNM >UniRef50_A7IQE5(10-550:559) Methylmalonyl-CoA mutase, large subunit n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IQE5_XANP2 E=2e-56 s/c=0.41 id=31% cov=45% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ----------------------------------------------FPGQYPFTRGIYPSMHRGRTWTqRQLIGLGTPQDYNVRVrRIIDAGATAISLlp cCSGFRGIDCDEVDPVL-------LGTCGTVVNTTDHMDAALDGV----PLGTISTAMNDPSPfTLLAFTLGVA---------RRRGID----------- --WRSITGTSnQSDYISHFIANHQFYrLSLPGSRRVLLDHIE-FCRRALPNWNPLSVVGQHMQQAGATPAETMGFTLSSAIQYAQDCIERGMDVDDVLRR FTFFFDISISFFEEIAKfRAGRRIWARIARERLGAkDPACWRFKFHGQTSGVDLTQQQPLNNIARVSVQAMAGILSGLQSMHTDAYDEAIACPSEETARI AVATQNILRDEAQLCAVIDPLGGSYYVERLTDQMEAEIEAVIARIDAAGGMYKAAEVGLVQTMIGESALAFQEQLETGERKIVGVNCYQveeDPTIPPAE RPDPEAMERHVERFKVFKRERSQDAVARALDALARAANSerENVFEKVVEAAE----AGVTHG--EMVGCLRREL >UniRef50_A1SET8(40-540:545) Methylmalonyl-CoA mutase, large subunit n=2 Tax=Bacteria RepID=A1SET8_NOCSJ E=2e-41 s/c=0.35 id=31% cov=44% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ----------------------------------------------LPGEAPYLRGAHAqgYRSK---PWRIFqlSGFGNPEDEAERIRYlLSKG----- -GTGFimehDRMTgdhLYDVD---HPEVVARredVGISGAVILSARDFELALTGIDqskyFAHPGGGVSQH----AAFALAGYWTVA---------ERRG LE-------------LHKLNGTGQADFFLTYIG---CPPLTQIppaaALRVNCDIVEY-AAKVAPKWTPISMAAYNGADSGLNAYQELAALFACCVSHLD EIVARGnVPVEQVAYALgGVSFRVAMDfFEDICKLRVARKMWHRLLTTRYGiTDPRALSLRIHIVTAGSAMTYQEPINNIVRGTVMGMAAVLGGVQSIGV SAYDEALSVPSEQAHRQSLRVQQILMHETNIPAVVDPLGGSYFIESLSAELEERAWAEFDRILDNGGFIQSLEDGSLHRMAGENAVAFQDSITSGDRKIV GVN-LGDSDGDPFgidgFEGSLDAFERGMARLKDLRAsRDGRHVSRALDRLANTMRSGGNVMSGVMDAVRAdASIGEVGDVYREVFGSWK--- >UniRef50_UPI0001C4300A(15-545:670) methylmalonyl-CoA mutase beta subunit n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4300A E=1e-24 s/c=0.22 id=26% cov=41% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- -----------------------------------------------PGQFPFTRGT-EHKRDKWRVSQELSG-ATPEVLNEHaLNDLARGQNVLHL--V LDEAA--KGNPKKDDD-------RGVKVESAADFQLIFEGIDVEKyPMHLYTGALLSPVLSTVA----ASIDE--------------------------G KLCGIIACDPLSELAKQGELSFSLSASYDDMAEASKWVIdkQKDIRTVL-VQSDAYH--NGGASAADELACALSTGVEYVSELMNRGLSADQAGSAMAFS FSIGSQSfvEIAKI-RSARLLWAAIMKA-FGASEEGSKMFIHARTSAFTKAKLDPYVNMLRGTSEAFSAAVAGADSIQVSPFDEPIQPSTSFSRRIARNT SLILMEESHLAATQDASGGAWYVEHLTDEIAKKAWQKFQEIEACGGMSQALAEGLPQAWINEtwEARLedVETRKQT----VVGVNQYANLDEAllhenk eaaewAIDRTRTAEKSLEVQPASFDEWLHAAKEGYSLSAMYKVIVEDSN-------------------------------- >UniRef50_A0LZJ1(185-420:469) Methylmalonyl-CoA mutase small subunit n=10 Tax=Bacteroidetes RepID=A0LZJ1_GRAFK E=2e-09 s/c=0.29 id=31% cov=20% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- --------------------------------------------------------AGANIPQQLAYSLAqvteylNHFEKIEFSEEQRSKF-TFQFNIS vgsdYFF------EISKI-RALRWLFATVAKE-FNFNTTCHVI---AEPTKRTKTLYDYNVNLLRTTTESMSAILGGADSICNMPYD-AIYHKNNNFGDR IARNQLLIMRnESYLDKVGNVAEGTYYIESLTRQLAEKALEIFKEIEKGGGFLKELKAGIIQKKIKESAAEEQEKFNNSELVLIGTNKFENPEDR----- ----------------------------------------------------------------------- >UniRef50_B8FMY4(23-537:564) Methylmalonyl-CoA mutase, large subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMY4_DESAA E=1e-119 s/c=0.84 id=26% cov=45% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- -----------------------------------------------PGQYPYTRGLYQSMYRDRLWLKSFiVGYATVEETNEAFkKYIAAGMNDLRIGG --DLNAQVGLDPDH-PSAFNSISCAGPTVPGLYRFEKILEGIDLEQGVYELGDA--SPSSCLFRYSMLLALMENQEK--------------------DIS RIRGNAVNDPIRSKLVFGIRDFTTEINKRICLDFIE-FSKKHTPKWHPFSPNGVDLNQSGMDAVAEVGGVLALGEAVCRELQnSRGISVDEFGP-MVFSM DADSDFFETIAKfRVARRMWARIAKEKLGAqTERAMKLKIGIRTSGLSLQEQNPLNNAARITLQILNCVFGGVNSLDSSCMDEALGLPSFEARMFSLNAQ HIVTHEANIPMVADPLGGSYYLEWLTNKIESDVTAYMAEMEANGGIFECMENDWLKGKMLENRRKVQKERQDGKRLIVGVDAFKHPEgpinqaiiDSAYH APPLDVRMKVLAELKEFReSRDPEKLKSGLMGVYLASKHGENVVRPIIDAIKAgMTLGEM--------------- >UniRef50_C6Q9Z9(69-515:626) Methylmalonyl-CoA mutase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z9_9RHIZ E=2e-69 s/c=0.60 id=23% cov=42% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ----------------------------------------------LPGQAPFTRGTKAV--SGGWDIRTFHIESDPKAANTAiLEDLAGGVTSIGLQVG F---------------------GNGLA-ATKEALGAALDGVLLDV------------CPIVL-----VAGDAFFDAALALTGVWDA-------RGVKAAE RQGSFGADPIGTLAMTGRLSESLDTSLARAVALMKITAAS--PRVQAMTADGVVAHVAGASEAQELAVMLSTLVAYLRAAEKGGLTPAEALPKINVSLAA DIDEFSTIAKlRAARRLIWR-VADACGAGDAAASVTINCPTSYRMMAKRDPWTNILRTTIACTGAALGGADAIVVLPFTFALGKPDAFARRVARNIQIVC QEESHLGRVTDPAGGSWYVENLTEDMAKKAWAIFQDIEGRGGMAAALTSGYIQDIIAKTADARAKDIATLRQELTGVSAFPLLGDDGVHAEAWPAVAAQS NKAAvEVKPLKPHRLGEAFEALRDAADAHGGF------KVFAASLGEIAD------------- >UniRef50_Q39TI8(8-551:556) Methylmalonyl-CoA mutase-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TI8_GEOMG E=1e-134 s/c=0.89 id=27% cov=45% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ----------------------------------------------MPGVYPYTRGLYPDGYALTPWmQQMVFGYGTVEETRKKMETLvAQGMEGYFgnk vFNMVLDIPSMYGIDSDH-PEAEGNVGQCGVTLCTVEDYDDLIQGWDLNTTNFSL-ITGDNCLP---------------ALALITAAAIRRGEEPGVLHG NSMNWYPRTAVQDIPSWEPKNG---------YLLMTDLIRYCS-NNIPAWNTANLFMYGLSEAGATPVQELAYGLAWGKSIIDACKERGLEPDSFVGRMG FQIGIQMNFFEEVAKlRAHRRMWAKITRDAGCTKPQCMHARVHVHTSGNVLTAQQPLNNTARITMQLMAAVMGGVQSIHSCSYDETIGIPTELSHRTALR SQQIMMWESGLPDVADPLAGSYYIEALTDQMEQAAWKIYNELEEQGGYRQGLADGSIKRAIDNSAYATKVKIKSGKQPVVGLNKYVMDRKDnyEPFKVDT ALEVKALERLKAFKAkRNQGDVDKALATVKNAClelrDGQGELMPVLVEAAlKGATNGEMCQVMRDVFG------ >UniRef50_B8FEL8(56-587:591) Methylmalonyl-CoA mutase, large subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEL8_DESAA E=1e-125 s/c=0.85 id=30% cov=46% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ----------------------------------------FLEKVGFPGQYPFTAGNAPfdFAKANEKLAAQanyrpdwggargvgkYGGFGAAADYRDY LKRMHSMGRFGGPNMAFDLVTQCGYDSD-SPMAEGEVGRVGVAIDSFRDFCVIYEPYtgDLEIDKVPSNFTINAPCAIIIAMYAELA---------RSRG IDPVA-------------LRGTPQNDILKEFIARGTYIYPAGPSLRLFRDALQFMRKH-MPLLNVNSIGGYHIREAGATRTQDLAFSLANAAAYIQEGIN AGLDPNDFLTKFTFNaFGGSMEIYKEIAFhRASRRMYARMLKEEFGvTNPKAMTIRQpitaHIGCS--STTLQRALNNWPRAVVGGVAAGMTGSLPGVFP PWDEPLGLGhSQEAVQMQLDATRILMHETGLTDVCDPWAGSYFMESLTDELEAEALAEMDKIKGMGGAVAAIESGYMPKAVAKSAYEKQKRIESQEDLVV GVNCYTSDLELEVTINREVEatydpalmatcEERQKASLRELKRTRDGRTAASlLSSLRTHAKDeNRNLMPDICDCVKNdCTLQEICDALREVFGE---- - >UniRef50_Q93HK2(2-372:377) McmA protein n=1 Tax=Streptomyces avermitilis RepID=Q93HK2_STRAW E=7e-72 s/c=0.74 id=28% cov=34% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------GYSTAADANARFRQLV-GSGTRAVPVVF DLPTRAGLDSD-APAARGLVGRRGVAVDSIDDMRVLFGGLRL--DRVVPSLAVDAPAAPLLVLYQLVAEE----------------------HGAPAQRL AGAVRGDVFKEFLARGPGVFPLRPSLRLAMNVFAYC-QAELPRWQCLSVCGHHLAGTGADPALEVAFTVAGGIEYLRAAVTAGLDVRTVAPRLTLCLVGG TTGrENRAKLRATRRVWTRTANERFG--------------SGR--TAPRLYVRTPRDGLATLAC------------------------------------ ---------------------TEDIEAGATALVDRIERLGGTLTVLEHGLAGQLLG---------RPHGDRPAT-------PRPHPPHQDSLDLQARQTE RLAKLRAwRVQPAVDEALLRLRKAAQGDDNVLYPMREALAArATVGEVCDAL----------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 1778 0 0 A 3 2981 * * * * * * * * * * * * 1164 * * 1855 2731 * * 3 0 * * * * * * 1847 0 0 N 4 * * * * * * 739 * * * * 2106 * * * * * * * 2568 4 0 * * * * * * 2029 0 0 K 5 * * * * * * * * 1241 * * * 1063 * 3348 * * * * * 5 0 * * * * * * 2037 0 0 V 6 * * * * * * * 1957 * 1661 * * * * * * * 1230 * * 6 0 * * * * * * 2327 0 0 R 7 * * * * * * * * * * * * * * 0 * * * * * 7 0 * * * * * * 2327 0 0 F 8 * * * * 1337 * * 1419 * 2118 * * * * * * * * * * 8 0 * * * * * * 2327 0 0 V 9 * * * * * * * 3183 * 1891 * * * * * * * 689 * * 9 0 * * * * * * 2327 0 0 T 10 * * * * * * * * * * * * * * * * 0 * * * 10 0 * * * * * * 2327 0 0 A 11 0 * * * * * * * * * * * * * * * * * * * 11 0 * * * * * * 2327 0 0 A 12 903 * * * * * * * * * * * * * * 3547 2090 2789 * * 12 0 * * * * * * 2327 0 0 S 13 2615 3002 * * * * * * * * * * 2789 * * 818 * * * * 13 0 * * * * * * 2327 0 0 L 14 * * * * * * * 2789 * 226 * * * * * * * * * * 14 0 * * * * * * 2327 0 0 F 15 * 2789 * * 226 * * * * * * * * * * * * * * * 15 0 * * * * * * 2327 0 0 D 16 * * 0 * * * * * * * * * * * * * * * * * 16 0 * * * * * * 2327 0 0 G 17 * * * * * 0 * * * * * * * * * * * * * * 17 0 * * * * * * 2327 0 0 H 18 * * * * * * 0 * * * * * * * * * * * * * 18 0 * * * * * * 2327 0 0 D 19 * * 0 * * * * * * * * * * * * * * * * * 19 0 * * * * * * 2327 0 0 A 20 226 * * * * * * * * * * * * * * 2789 * * * * 20 0 * * * * * * 2327 0 0 S 21 406 * * * * * * * * * * * * * * 2028 * * * * 21 0 * * * * * * 2327 0 0 I 22 * * * * * * * 0 * * * * * * * * * * * * 22 0 * * * * * * 2327 0 0 N 23 * * * * * * * * * * * 226 * * * 2789 * * * * 23 0 * * * * * * 2327 0 0 I 24 * * * * * * * 374 * * * * * * * * 2789 3576 * * 24 0 * * * * * * 2327 0 0 M 25 * * * * * * * 1972 * * 689 * * * * * * 3002 * * 25 0 * * * * * * 2327 0 0 R 26 * * * * * * * * * * * 2789 * * 226 * * * * * 26 0 * * * * * * 2327 0 0 R 27 * * * * * * * * * 2789 * * * * 226 * * * * * 27 0 * * * * * * 2327 0 0 I 28 * * * 2789 * * * 893 * 2273 3183 * * * * * * * * * 28 0 * * * * * * 2327 0 0 L 29 * * * * 2118 * * 2581 * 731 * * * * * * * * * * 29 0 * * * * * * 2327 0 0 Q 30 * * * * * * * 2789 * * * * * 226 * * * * * * 30 0 * * * * * * 2327 0 0 S 31 1136 * 3183 * * 4624 2789 * * * * * * 3468 * 2652 * * * * 31 0 * * * * * * 2327 0 0 Q 32 * * * * * * 2789 * * * 4624 * * 1510 3002 1969 3587 * * * 32 0 * * * * * * 2327 0 0 G 33 * * * * * 0 * * * * * * * * * * * * * * 33 0 * * * * * * 2327 0 0 C 34 2276 2652 * * * * * 2789 * * * * * * * * * 1030 * * 34 0 * * * * * * 2327 0 0 E 35 * * * 0 * * * * * * * * * * * * * * * * 35 0 * * * * * * 2327 0 0 V 36 * * * * * * * 3183 * * * * * * * * * 168 * * 36 0 * * * * * * 2327 0 0 I 37 * * * * * * * 424 * * * * * * * * * 1972 * * 37 0 * * * * * * 2327 0 0 H 38 * * * * * * 226 * * * * * * * * * * * * 2789 38 0 * * * * * * 2327 0 0 L 39 * * * * * * * * * 0 * * * * * * * * * * 39 0 * * * * * * 2327 0 0 G 40 * * * * * 0 * * * * * * * * * 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1000 L 1049 * * * * 3357 5518 * * * 453 3090 * * * * * * * * 4942 1049 0 * * * * * 0 4488 0 1624 F 1050 * 6075 5420 3448 1800 * * * 4506 * 4927 * * * 1306 * * 4746 * 3962 1050 0 * * * * 997 1003 4355 0 1624 E 1051 4021 * 2435 1385 * 3933 * * 4588 * 4951 * * 3538 5490 3616 5988 5281 * * 1051 0 * * * * * 0 4361 0 1000 V 1052 3039 4426 * 4059 * * * 4067 * * 3905 * * * * * * 632 * * 1052 0 * * * * * 0 4361 0 1000 G 1053 4392 * * * 1713 1664 5161 * * * * * * * * * * 3475 3052 3422 1053 0 * * * * 0 * 4381 0 1000 G 1054 * * * * * 0 * * * * * * * * * * * * * * 1054 0 * * * * * * 4432 0 0 Q 1055 * 4334 * 1934 * * * * 4874 * * * * 2096 2592 3519 2577 * * * 1055 0 * * * * * * 3855 0 0 Y 1056 * * * * 3137 * 2979 * * 4109 * * * * * * * * 2341 988 1056 51 4838 * 1000 1000 * * 3625 1000 0 R 1057 * * * * * * * * 2731 * * * * 2506 571 * * * * * 1057 0 * * * * * * 3452 0 0 R 1058 3686 * 3634 * * * * * * * * * * 3240 442 * * * * * 1058 0 * * * * * * 2786 0 0 N 1059 * * * 2593 * * * * * * * 633 * * 2401 * * * * * 1059 0 * * * * * * 2376 0 0 M 1060 * * * * * * * * * 2488 542 * * * * * * 2887 * * 1060 0 * * 0 * * * 2316 0 0 //