HHsearch 1.5 NAME c4xa6C_ FAM FILE c4xa6C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4xa6C_.a3m DATE Sat Jul 4 08:18:26 2015 LENG 103 match states, 103 columns in multiple alignment FILT 54 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4244 -0.5004 SEQ >ss_dssp CCCCTTTCCHHHHHHHHHHHTCCCCCCCTTHHHHHHHHHHHHCCCTTTCCCCCTTTCCHHHHHHHHCCHHHHHCCHHHHHHHHHSCSSCCHHHHHHHHHH TCC >sa_dssp EEEEEEDDDEEEEEDEDDDEEEEEEEEEEDEDEEEEEDEEDDEEEEEDDEEEEEEDEDDDEDDEEEEDEDEEDDEEEDCDEBDEDEEEEDEECDECCEEC EEE >ss_pred CCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHH CCC >ss_conf 9860005000007486888873201325888999998989977435557788999999999999765313430102233655258778873899999996 279 >Consensus kxnxextxdxqxrldxAexxalkgxxxLEArxRelexelxxeqxxxxxixxxxEkxxELtxqvExleERDFYFxLRdIEilcQxxexxxxxxxxxixxIL YaT >c4xa6C_ RXNXEQTIDLQHRLDEAEQIALGGQLQLEARVRELENELEAEQRNAESVGXRSERRIELTYQTEDLEERDFYFGLRNIELICQENEGENDPVLQRIVDIL YAT >UniRef50_Q84TR5(189-248:280) Microtubule plus-end binding protein n=1 Tax=Chlamydomonas reinhardtii RepID=Q84TR5_CHLRE E=9e-06 s/c=0.85 id=44% cov=35% -------------------------------------------------------------------EKDFYYSkLRDVELLCQTPTVCELPIMKRVQEI LYA- >UniRef50_Q8WQ86(289-365:506) Microtubule-associated protein RP/EB family member 1 n=1 Tax=Dictyostelium discoideum RepID=EB1_DICDI E=3e-05 s/c=0.65 id=32% cov=72% --------------------------ELEQQKRELEQQRKELEEQKSVIQEMTEKIANFEITIQDIEkDRDFYFErLREAEIFCQDH--SDVPLLGEVLK ILY-- >UniRef50_Q8MY61(179-282:300) Microtubule-associated protein EB1 homologue n=4 Tax=Chordata RepID=Q8MY61_CIOSA E=2e-22 s/c=1.02 id=41% cov=96% KTNGETTPDNTENPRPARSVA--PQRISSASSASTNQELVTMRHDNESL---KEQNQELQSTVEALEkERDFYFGkLRDIEVVCQEEEGEVPDIMKELVK qitaILYAT >UniRef50_A7AM82(258-376:380) Microtubule-associated protein RP/EB family member protein n=1 Tax=Babesia bovis RepID=A7AM82_BABBO E=0.0004 s/c=0.38 id=31% cov=87% -------------LDTANKDIEKLKIILEASEREVNSLKMQIDAQNTEMNDIKEQVNNYKVQIDKLENdlktqkaqieqlkiqlgqaqaekqvakmsKDF YYNkLRKIEIMCQKNENGHCD-VNKLFDIMYAT >UniRef50_B7FVS3(161-231:256) Predicted protein n=2 Tax=Bacillariophyta RepID=B7FVS3_PHATR E=0.0004 s/c=0.65 id=40% cov=50% ----------------------------------------------------SLKTLELEQAVIDIEkERDFYFrKLRDVEIMFQvyqekVDDGDQNNLV DDVFKILYAT >UniRef50_A4S7S9(184-244:354) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7S9_OSTLU E=2e-11 s/c=1.15 id=40% cov=58% --------------------------------------------NGASAREMTETNTALALQVERAEqEREFYFeKLQDVEYVCQRPEFENNPLKNVVER ILYHT >UniRef50_A2DJ02(241-279:298) EB1 protein n=1 Tax=Trichomonas vaginalis RepID=A2DJ02_TRIVA E=4e-06 s/c=1.35 id=50% cov=37% --------------------------------------------------------------TQANEERDFYYdKLRKIETFCQDNEDD--EMVKKILAI LY-- >UniRef50_C4XZP2(192-273:287) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XZP2_CLAL4 E=4e-06 s/c=0.64 id=43% cov=50% -----------------------------------------------------EEAAELRLSAESLEtERNFYFNkLREIEILTQSiqdsgAEALVLELV GQIQEILYST >UniRef50_UPI000186E4BC(246-354:377) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186E4BC E=5e-11 s/c=0.63 id=32% cov=83% -------------------VFLASAVKPQANNRSIfpKSQLPTQRGDTGRIDELNAQVAELRIAVEGLEkERDFYFNkLRDIEVMCQDEDDVDskTPIIN KILEVLYAT # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 102 * * * * * 3878 * * * * * 1 0 * * * * * * 2154 0 0 X 2 * * * * * * * * 426 * * * * * * * 1969 * * * 2 0 * * * * * * 2142 0 0 N 3 * * * * * * * * * * * 0 * * * * * * * * 3 0 * * * * * * 2154 0 0 X 4 * * * * * 1969 * * * 755 2716 * * * * * * * * * 4 0 * * * * * * 2142 0 0 E 5 * * * 223 * * * * * * * * * 2806 * * * * * * 5 0 * * * * * * 2323 0 0 Q 6 3660 * * * * 3479 * * * * * * * 921 * * 2188 3580 * * 6 0 * * * * * * 2394 0 0 T 7 * * * * * * * 2320 * * * * * * * 3479 494 * * * 7 0 * * * * * * 2394 0 0 I 8 * * * * * * * 4487 2320 * * * 2188 * * * * 900 * * 8 1107 900 * 0 * * * 2394 1644 0 D 9 * * 322 2320 * * * * * * * * * * * * * * * * 9 0 * * * * * * 2394 0 0 L 10 * * * * * * * * * 501 3754 2188 * * * * * * * * 10 0 * * * * * * 2394 0 0 Q 11 * * * * * * * * * * * * * 357 * * 2188 * * * 11 0 * * * * * * 2394 0 0 H 12 * * * 2188 * * 1748 3754 * 2494 * * * 3250 * * * 2987 * * 12 0 * * * * * * 2394 0 0 R 13 * * * * * * * * * * * 2188 * * 357 * * * * * 13 0 * * * * * * 2394 0 0 L 14 * * * * * * * * * 287 * * 2471 * * * * * * * 14 0 * * * * * * 2782 0 0 D 15 * * 287 * * * * * * * * * * * 2471 * * * * * 15 0 * * * * * * 2782 0 0 E 16 * * 3063 880 * * * * * * * * 2471 * * * 2674 * * * 16 0 * * * * * * 2782 0 0 A 17 0 * * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 2782 0 0 E 18 * * * 593 * * * * * * * 2674 * * 2471 * * * * * 18 0 * * * * * * 2782 0 0 Q 19 4359 * * * * * * * 2674 * * 1776 * 2393 * 1957 4196 * * * 19 0 * * * * * * 2782 0 0 I 20 4342 * 2685 * * * * 3174 * 1646 * 3545 * * * * * 1841 * * 20 0 * * * * * * 3213 0 0 A 21 504 * * * 2844 * * 2685 * * * * * * * * * * * * 21 217 * 2837 * * * * 3213 0 0 L 22 * * * 2426 * * * * * 556 2902 * * * * * * * * * 22 97 3944 * 0 * * 0 2899 1000 1000 G 23 2572 * * * * 3317 * * 451 * * * * * * * * * * * 23 0 * * * * 0 * 2899 0 1000 G 24 * * * * * 823 * * * 2685 * * 2837 * * 2844 * * * * 24 283 2491 * 1585 585 * * 3213 1466 0 Q 25 2844 * * * * 1742 * * 2230 * * * * 1520 * * * * * * 25 414 2002 * 2000 415 * * 3213 1573 0 L 26 * * * * * * * 2390 3226 2951 * * * 2002 2837 * * 2446 * * 26 73 4342 * 2000 415 * * 3213 1000 0 Q 27 * * * 3262 * * * 2044 1475 * * * * 1768 * * * * * * 27 260 2599 * 0 * * * 3682 1466 0 L 28 * * * * * * * * * 483 4712 * 2833 * * 3239 * * * * 28 0 * * * * * * 3682 0 0 E 29 * * * 515 * * * * * * * * * 2364 * 3239 * * * * 29 80 4211 * 4755 54 * * 3682 1000 0 A 30 399 * * * * * * * * * * * * 2507 * * 3933 * * * 30 0 * * * * * * 3682 0 0 R 31 * * * * * * * * * * * 2833 * 2660 1123 2044 * * * * 31 0 * * * * * * 3682 0 0 V 32 * * * 2873 * * * 2007 3262 * * 2833 * * * 3239 * 1921 * * 32 0 * * * * * * 3682 0 0 R 33 3239 * * * * * * * * * * 3935 * * 271 * * * * * 33 0 * * * * * * 3682 0 0 E 34 4437 * * 614 * 4211 * * * * * * * * * 2022 * * * * 34 0 * * * * * * 3682 0 0 L 35 * * * * * * * 2423 * 808 * * * * * * 3239 2873 * * 35 218 2833 * 1000 1000 * * 3682 1000 0 E 36 * * * 696 * * * * 2833 * * 2044 * * * * * * * * 36 0 * * * * * * 3682 0 0 N 37 * * * * 3933 4191 * * * * * 1982 * 1964 * 1433 * * * * 37 0 * * * * * * 3682 0 0 E 38 * * * 692 * * * * * 2873 * * * 2032 * * * * * * 38 0 * * * * * * 3682 0 0 L 39 * * * * * * * * 2873 793 * * * * 3262 * * 2458 * * 39 0 * * * * * * 3682 0 0 E 40 * * 2398 1955 * * 3935 * 3262 * 2873 * 2833 * * * * 3239 * * 40 0 * * * * * * 3682 0 0 A 41 2860 * * 3262 * 2784 * * * * * 4712 * 2873 * 2381 2022 * * * 41 0 * * * * * * 3682 0 0 E 42 * * * 963 * * * 2873 * 3262 3239 * * 2833 * * * * * * 42 0 * * * * * * 3682 0 0 Q 43 * * 2873 3262 * * * * * * * * * 963 2022 * * * * * 43 257 2617 * 0 * * * 3682 1485 0 R 44 2945 * * 3331 * 2938 3328 * 2360 * * * * * 1531 * * * * * 44 168 3184 * 1585 585 * * 3739 1306 0 N 45 * * 1652 * * 4930 * * 4969 * * 2914 * 2143 2640 3357 * * * * 45 45 5026 * 1585 585 * * 3919 1000 0 A 46 2835 * * * * 3521 * * 3183 * * 1855 * 4185 * 3129 2442 4930 * * 46 0 * * * * * * 3919 0 0 E 47 2859 * 4609 1648 * 3110 * * * 5026 * * * 3907 * 2830 2754 * * * 47 47 4969 * 1585 585 * * 3919 1000 0 S 48 4552 * 2947 3104 * * * * 2580 * * * * * 3110 1926 4185 3183 * * 48 45 5034 * 1585 585 * * 3919 1000 0 V 49 2859 * * * * 3997 * 1628 * 2937 3104 2888 * * * * * 3411 * * 49 470 2471 3355 818 1208 * * 3919 1512 0 G 50 3770 * 2873 * * 2216 * 5264 4548 3218 5243 2872 * 2732 4518 * * * 4589 * 50 38 5264 * 1585 585 * 0 3708 1000 1000 X 51 * * 3308 1718 * * * * * 4923 5098 4071 * * 1717 3309 * 3871 * * 51 0 * * * * * 0 4763 0 1000 R 52 * * * * * * * 2872 1703 2358 2628 * * 4548 2674 * * * * * 52 0 * * * * 0 * 3708 0 1000 S 53 5017 * * * 4783 * * * 2081 * * 2645 * * 4154 2367 2711 * * 2901 53 256 2622 * 292 2446 * * 5006 1508 0 E 54 4131 * * 441 * * * * 3807 3541 * * * 4358 * * * * * * 54 0 * * * * * * 4453 0 0 R 55 * * * 2259 * * * * 1815 * * * * 2498 1920 * 3930 * * * 55 0 * * * * * * 4440 0 0 R 56 4154 * * * * * * 2259 5677 2798 * 3043 * * 2031 * 3568 3043 * * 56 0 * * * * * * 4440 0 0 I 57 2213 * * 3560 * * * 3931 * 2581 4913 3944 * 4166 * * 3158 2315 * * 57 375 2126 * 0 * * * 4440 1831 0 E 58 4683 * 5331 474 * * * * 4419 * * 2970 * 4576 * * * * * * 58 0 * * * * * * 4174 0 0 L 59 * * * * 4164 * * * * 448 5209 * * * * * * 4008 * 3035 59 0 * * * * * * 4097 0 0 T 60 4614 * * 3528 * * * * 2285 * * * * 3277 2974 4049 1410 * * * 60 0 * * * * * * 4097 0 0 Y 61 5371 * * * 3787 4507 * 2835 * 2809 * * * 5016 * 3277 5209 3679 * 1568 61 0 * * * * * * 4097 0 0 Q 62 3555 * * * * * 5277 * * * 5440 5480 * 921 * 4333 2017 * * 5716 62 0 * * * * * * 4257 0 0 T 63 5319 * * * * 4058 * 2751 * 5259 * * * * * 2160 2762 1438 * * 63 0 * * * * * * 4363 0 0 E 64 5462 * 2683 633 * * * 5066 * * * * * 3638 5379 4557 * * * * 64 0 * * * * * * 4363 0 0 D 65 2950 * 2861 1676 * 2836 * * 3692 5274 * * * * 4626 3848 4520 * * 5424 65 0 * * * * * * 4427 0 0 L 66 3829 * * * * * * 2678 * 479 * 4160 * * * * * * * * 66 0 * * * * * * 2974 0 0 E 67 * * * 563 * * * * 2524 * * * * 4512 3243 * * * * * 67 1063 939 * 0 * * * 2967 2732 0 E 68 * * 4112 166 * * * * * * * 4299 * * * * * * * * 68 75 4299 * 4858 51 * * 3271 1000 0 R 69 * * * * * * * * 3579 * * * * * 126 * * * * * 69 0 * * * * * * 3271 0 0 D 70 * * 273 3590 * * * * * * * 3484 * * * * * * * * 70 0 * * * * * * 3271 0 0 F 71 * * * * 0 * * * * * * * * * * * * * * * 71 0 * * * * * * 3271 0 0 Y 72 * * * * * * * * * * * * * * * * * * * 0 72 0 * * * * * * 3271 0 0 F 73 * * * * 252 * * * * * * * * * * * * * * 2643 73 444 1915 * 0 * * * 3271 2398 0 G 74 * * * 4912 * 1739 * * 1915 * * 2049 * * * 2638 * * * * 74 1809 485 * 0 * * * 3271 2981 0 L 75 * * * * * * * * * 0 * * * * * * * * * * 75 0 * * * * * * 3271 0 0 R 76 * * * * * * * * * * * * * 3760 111 * * * * * 76 0 * * * * * * 3271 0 0 N 77 * * 805 2359 * * * * 3764 * * 5623 * * 3483 5501 5200 * * * 77 0 * * * * * * 3271 0 0 I 78 4912 * * * * * * 530 * 4804 * * * * * * * 2069 * * 78 0 * * * * * * 3271 0 0 E 79 * * * 0 * * * * * * * * * * * * * * * * 79 0 * * * * * * 3271 0 0 L 80 * * 5343 5108 4711 * * 1218 * 2700 * * * * * 4704 5454 2135 * 4811 80 0 * * * * * * 3271 0 0 I 81 * * * * 3189 * * 2135 * 1300 2675 * * * * * * 3324 * * 81 0 * * * * * * 3271 0 0 C 82 4324 434 * * 5309 * * * * 3969 5243 * * * * 5338 5268 4511 * * 82 53 * 4799 * * * * 3273 0 0 Q 83 * * * 4640 * * * * * * * * * 59 * * * * * * 83 142 3412 * 3088 180 0 * 3229 1711 1000 E 84 5231 * 3003 1582 * 4799 * * 4294 * * 4112 * 4482 3693 4303 2808 4202 * * 84 139 3449 * 1156 859 * * 3273 1860 0 N 85 3444 * 3233 4565 * * 2696 * * 4530 * 2201 2146 4747 5931 4699 5243 * * * 85 116 4511 4906 2000 415 * * 3273 1322 0 E 86 * * 2684 810 * 5563 * * 4469 5928 * * 3827 * 5475 3932 4921 * * * 86 80 5213 5196 0 * * 0 3259 1000 1000 G 87 3882 * 3846 5032 3612 2980 * * 3907 4031 5292 2468 * 3852 5432 3039 4598 4875 * * 87 34 * 5445 * * 1000 1000 3244 0 1303 E 88 4730 4845 2628 1465 * 4240 * 5126 5543 3885 * 5653 * 5329 * 2974 * 4040 * * 88 88 * 4081 * * 1000 1000 3260 0 1361 N 89 5810 * 2472 3062 * 2593 3051 * * 4417 4155 3212 4304 5172 5304 5152 * 4235 * * 89 94 4499 5748 1581 587 1434 667 3253 1245 1468 D 90 * 4008 3390 5179 * 4138 4805 4018 4403 3247 * 2966 5298 3827 5597 * 3016 2838 * * 90 67 4453 * 2322 322 0 * 3264 1000 1477 P 91 * * 2360 2777 * 5570 4609 * * 4810 * 4327 1377 * 5343 5389 4331 5124 * * 91 214 3892 3828 1780 497 * * 3266 1595 0 V 92 4645 * * 5046 2863 * * 2786 * 1226 3445 * * * * 4731 4408 4530 * * 92 0 * * * * 0 * 3203 0 1516 L 93 5208 * * * 5846 * * 2417 4682 2270 4131 * * * * 4255 3177 1727 * * 93 0 * * * * * * 3266 0 0 Q 94 4489 4609 4326 3347 * 3671 * * 2243 * * 2680 * 2415 4723 3737 * 5627 * * 94 0 * * * * * * 3266 0 0 R 95 4402 * 3613 3305 * * 5487 * 1783 * * * * 4212 2203 4578 3964 3645 * * 95 0 * * * * * * 3266 0 0 I 96 5060 * * * * * * 989 * 3392 * * * * * * * 1431 * * 96 0 * * * * * * 3266 0 0 V 97 * * * 3645 2751 * * 5570 4658 1620 4743 * * 1829 * * 5481 4490 * * 97 0 * * * * * * 3266 0 0 D 98 2759 * 2537 2161 * 4365 * * 2737 * * 5711 * 4498 2603 5060 * * * * 98 35 5376 * 2000 415 * * 3266 1000 0 I 99 * * * * * * * 363 * 4723 * * * * * * * 2438 * * 99 0 * * * * * * 3266 0 0 L 100 * * * * * * * * * 121 3638 * * * * * * * * * 100 0 * * * * * * 3266 0 0 Y 101 * * * * * * * * * * * * * * * * * * * 0 101 0 * * * * * * 3266 0 0 A 102 719 * * 3350 * * 3107 * 4428 * * * * * * 2921 * * * * 102 0 * * * * * * 3111 0 0 T 103 * * * * * * * * * * * * * * * 4727 56 * * * 103 0 * * 0 * * * 3079 0 0 //