HHsearch 1.5 NAME c4v1an_ FAM FILE c4v1an_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4v1an_.a3m DATE Sat Oct 11 10:34:51 2014 LENG 97 match states, 97 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4380 1.2053 SEQ >ss_dssp CCCCSSCCCCCCCCTTSHHHHSTTSSTTHHHHTTSSSCGGGGCCSCTTCTTCCCCHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHHCCSCC >sa_dssp EEEEEEEDEEEEDEEECEEDDDEDDEDECBEECEEEEEDDEDDEDDDCDDDDECDDCDDCDCCDEDBBEECEEEDDEEBDEDCDEBDDDDEEEEEEE >ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >ss_conf 9752568888876677731311134342001069860636641188112133500899999886531000033457889999999999952104779 >Consensus xxxxxxxPxxkpxdxWsekrAxFGqnDyIdILGdxxxhpxxxxxxPxWlRGxxGNElQxlirkrxxxxxxxxpexxxxlxKRIxyLykxxNrxxkxx >c4v1an_ FHVRVTLPPRKVVDRWNEKRAMFGVYDNIGILGNFEKHPKELIKGPIWLRGWKGNELQRCIRKKRMVGNRMFIDDLHNLNKRISYLYKHFNRHGKYR >UniRef50_UPI000186E7B7(62-157:164) mitochondrial 50S ribosomal protein L51, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E7B7 E=2e-21 s/c=1.07 id=38% cov=95% ---KVHGMTYKPGNSWTKEKATFGQNDYIDILGDFKLKsFQVKYDVPKWLRGVKGNEFQLLTLKKKVYQGTKfqheFPEKWTSLNKRINYLYKYLNKRT- -- >UniRef50_UPI00005878E2(26-116:126) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005878E2 E=4e-24 s/c=1.23 id=49% cov=94% ---KLPAPKKSEKDYWSEKRALFGENDYKDILGDGTYSLRKNVKvGPWWMRGWKGNELQMMIRKRKMVGYQMGPETRHNMNKRISYLFKFMNRN---- >UniRef50_C3ZMK1(24-113:114) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZMK1_BRAFL E=1e-21 s/c=1.16 id=47% cov=92% -----PMPHKTPKDHWTKEKAMFGCYDYQDILGDHPYiHPRHLcLEGPKYVRGFRGNELQRLIRKKCMAGKHMGEEDWKNLQKRINLLYRRMNRR---- >UniRef50_Q5D9U3(29-122:134) SJCHGC03337 protein n=1 Tax=Schistosoma japonicum RepID=Q5D9U3_SCHJA E=5e-21 s/c=1.07 id=32% cov=93% ---QVLLPEHKPRDLWSPHRAYFGQNDYIDILGDGKIKPRDFYTGPPWALGAR-NEYQRVCSRLNNPAIVAWMEEFEPSKltaelKLQRYLFKKVNKR-- -- >UniRef50_UPI00015B4107(60-155:161) PREDICTED: similar to mitochondrial ribosomal protein, L51, putative isoform 2 n=1 Tax=Nasonia vitripennis RepID=UPI00015B4107 E=7e-21 s/c=1.05 id=40% cov=94% -----PMPIYRPDNSWSERKALFGQNDYIDILGTQELPVTKIMYNvPKWLRGVRGdNELQVLIRKKKALRLGVYpiarPTKWKELNSRIMYLYKFMNRKT R-- >UniRef50_Q22438(66-164:199) 39S ribosomal protein L51, mitochondrial n=3 Tax=Chromadorea RepID=RM51_CAEEL E=3e-19 s/c=0.97 id=38% cov=90% -------PAYKVRDQWSDEAARFGQNDYIDLLGDGSVHPAQLqYHTPTWLRGFpgqhKANELIKLIHYRNLYDAKLKqnsPKRWHELRKRIKYLMMQHNY N---- >UniRef50_C9W1G1(32-150:152) 39S ribosomal protein L51 n=1 Tax=Rhipicephalus sanguineus RepID=C9W1G1_RHISA E=6e-15 s/c=0.67 id=40% cov=99% KEKLRTQPVYTPKDAWCERRALFGQNDYIDILGNGNLKPVHIMRGvPGWLQGFQGNEFQMLLRKRQVVNHwrQTRPTDFHKLQKRIRWLYKVLNHRTR-- >UniRef50_Q5BJJ8(7-124:124) 39S ribosomal protein L51, mitochondrial n=10 Tax=Euteleostomi RepID=RM51_DANRE E=3e-37 s/c=1.37 id=63% cov=100% IRMH-AIPKLKEVDRWTEKRSMFGVYDNIGILGDFKAHPKDMIRGPVWVRGFRGNELQRLLRKRNMVGDRMMTEDRHNLQKRISHLYRRFNRHGKHR >UniRef50_Q9VLJ9(70-168:174) 39S ribosomal protein L51, mitochondrial n=11 Tax=Neoptera RepID=RM51_DROME E=2e-25 s/c=1.35 id=38% cov=98% -GQKLPMPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSlPSWLRGVSGNEYQVLLRKRKLLEKSKYPIArptkWREMEKRILYLYKFLNRKTK -- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * F 1 2784 2923 * * 3038 * * 2024 1493 * * * * * * * * * * * 1 0 * * * * * * 2006 0 0 H 2 * * * 2871 * 1911 3274 * * * * * * 3154 1968 2988 * * * * 2 0 * * * * * * 2180 0 0 V 3 * * * * * * * 3361 1832 2988 3165 * * 2568 * * * 2213 * * 3 0 * * * * * * 2180 0 0 R 4 * * * * * * 3882 * 1416 2674 * * * 2932 1891 * * * * * 4 101 * 3882 * * * * 2648 0 0 V 5 * * * * * * * * 3599 1586 3745 2940 * * 3696 * * 1725 * * 5 112 3745 * 0 * 0 * 2657 1000 1000 T 6 2808 * * * * * 2750 * * 3070 * * 1462 * * 3892 2652 * * * 6 0 * * * * * * 2750 0 0 L 7 3775 * * * * 3584 * 2808 * 2201 1786 * * 2965 * * * 3938 * * 7 0 * * * * * * 2750 0 0 P 8 * * * * * * * * * * 3768 * 110 * * * * * * * 8 0 * * * * * * 2911 0 0 P 9 2632 * * 2802 * * 3907 3902 2647 * * * 3500 * * * 3768 2057 * * 9 0 * * * * * * 2911 0 0 R 10 * * * * * * 3222 * 2909 3622 * * 2730 * 4468 * * * * 1051 10 0 * * * * * * 2911 0 0 K 11 4084 * * * * * * * 837 * * * * * 2370 3912 3041 * * * 11 0 * * * * * * 2911 0 0 V 12 * * * 2550 * * * * 4785 * * * 851 * * * * 2067 * * 12 0 * * * * * * 2911 0 0 V 13 * * 3902 * * 3768 * * 1421 * * * * * 2258 * * 1851 * * 13 0 * * * * * * 2911 0 0 D 14 * * 472 * * * * * * * * 1842 * * * * * * * * 14 0 * * * * * * 2839 0 0 R 15 2520 * * * * * 3986 * * 3254 * * 3669 3269 1973 2641 * * * 4055 15 0 * * * * * * 2839 0 0 W 16 * * * * * * * * * * * * * * * * * * 0 * 16 0 * * * * * * 2839 0 0 N 17 * 2894 * * * * * * * * * 3624 * * * 1156 1575 * * * 17 0 * * * * * * 2839 0 0 E 18 * * 3269 762 * * * * 2308 * * * 3254 * * * * * * * 18 0 * * * * * * 2839 0 0 K 19 * * * 1912 * * 3254 * 1206 * * * * * 2352 * * * * * 19 0 * * * * * * 2839 0 0 R 20 3269 * * * * * * * 2162 * * * * * 572 * * * * * 20 0 * * * * * * 2839 0 0 A 21 275 * * * * * * * * * * * * * * 3069 4198 * * * 21 0 * * * * * * 2839 0 0 M 22 * * * * * * * * * 1416 1925 * * * 3269 * 2705 * * 3254 22 0 * * * * * * 2839 0 0 F 23 * * * * 0 * * * * * * * * * * * * * * * 23 0 * * * * * * 2839 0 0 G 24 * * * * * 0 * * * * * * * * * * * * * * 24 0 * * * * * * 2839 0 0 V 25 4198 3986 * 4055 * * * * * * * * * 685 * * * 2320 * * 25 0 * * * * * * 2839 0 0 Y 26 * * * * * * * * * * * 552 * * * * * * * 1653 26 0 * * * * * * 2839 0 0 D 27 * * 0 * * * * * * * * * * * * * * * * * 27 45 * 5028 * * * * 2839 0 0 N 28 * * * * * * * * * * * 2062 * * * * * * * 395 28 0 * * * * * 0 2829 0 1000 I 29 * * * * * * * 283 4029 * * * * 3948 * * * 4266 * * 29 0 * * * * * 0 2829 0 1000 G 30 * * 395 * * 2062 * * * * * * * * * * * * * * 30 0 * * * * * 0 2829 0 1000 I 31 * * * * * * * 160 * 3254 * * * * * * * * * * 31 0 * * * * * 0 2829 0 1000 L 32 * * * * * * * * * 0 * * * * * * * * * * 32 0 * * * * * 0 2829 0 1000 G 33 * * * * * 0 * * * * * * * * * * * * * * 33 0 * * * * * 0 2829 0 1000 N 34 * * 900 * * 4156 * * * * * 1956 * * * 3506 4004 * * * 34 0 * * * * * 0 2829 0 1000 F 35 * * 3028 * 1552 1289 3948 * * * * * * 4004 * * * * * * 35 0 * * * * * 0 2829 0 1000 E 36 3506 * * 2757 * * * * 1714 * * 4335 3948 4156 3028 3254 4029 * * * 36 0 * * * * * 0 2829 0 1000 K 37 3354 * * * * * * 3243 3546 1238 * * * * 4156 * * 3254 * 2988 37 97 3948 * 0 * * 0 2829 1000 1000 H 38 * * * * * * 911 * 1537 * * * 4004 * * 4029 * * * * 38 76 4281 * 0 * * 0 2829 1000 1000 P 39 * * * * 4281 * * * * 4029 * * 368 * * 4322 * 4004 * * 39 61 4604 * 0 * * 0 2829 1000 1000 K 40 3254 * * * 4322 * * 3506 2062 * * * * 4281 1874 * 4004 2932 * * 40 0 * * * * * 0 2829 0 1000 E 41 * * 1946 3546 * * 2305 * 2601 * * * * 2691 4633 * * 3434 * * 41 0 * * * * * 0 2829 0 1000 L 42 * * * * 3243 * * 2323 4281 1683 2848 4029 * * * * * 2927 * * 42 358 2187 * 0 * * 0 2829 1764 1000 I 43 * * * * * * * 2062 * 3238 2058 * * * * * * 4029 * 1502 43 0 * * * * * 0 2829 0 1000 K 44 * * 3302 3948 * * 3254 * 3261 * * * * 3506 2857 4604 2628 4266 * 2798 44 91 4029 * 0 * * 0 2829 1000 1000 G 45 * * * * * 941 * * * * * 2734 * * * 3617 3254 2811 * * 45 477 1829 * 0 * * 0 2829 1708 1000 P 46 * * * * * * * * * * * * 0 * * * * * * * 46 0 * * * * * 0 2829 0 1000 I 47 * * * * * 4335 * 2861 2130 * * * 3243 2794 * 3028 3254 4448 4029 * 47 0 * * * * * 0 2829 0 1000 W 48 * * * * * * * * * * * * * * * * * * 97 3948 48 0 * * * * * 0 2829 0 1000 L 49 3243 * * * * * * * * 469 4029 * * * * * * 3176 * * 49 0 * * * * * 0 2829 0 1000 R 50 * * * * * * * * 4266 3243 * * * 4335 335 * * * * * 50 0 * * * * * 0 2829 0 1000 G 51 * * * * * 0 * * * * * * * * * * * * * * 51 0 * * * * * 0 2829 0 1000 W 52 3243 * * * 1304 * * * * * * * * * * * * 1804 2300 * 52 160 3254 * 2000 415 * 0 2829 1000 1000 K 53 * * * * * * * * 1502 * * * * 2862 1371 3028 * * * * 53 161 * 3243 * * * 0 2829 0 1000 G 54 3129 * * * * 175 * * * * * * * * * * * * * * 54 101 3885 * 0 * 0 * 2641 1000 1393 N 55 * * * * * * * * * * * 0 * * * * * * * * 55 0 * * * * * * 2839 0 0 E 56 * * * 0 * * * * * * * * * * * * * * * * 56 0 * * * * * * 2839 0 0 L 57 * * * * 2763 * * * * 880 * * * * * * * * * 1692 57 0 * * * * * * 2839 0 0 Q 58 * * * * * * * 3269 * * * * * 158 * * * * * * 58 0 * * * * * * 2839 0 0 R 59 * * * * * * * * 3269 3338 2361 * * * 1242 * * 2474 * * 59 0 * * * * * * 2839 0 0 C 60 * 2882 * * * * * * * 516 4055 * * * * * * 3254 * * 60 0 * * * * * * 2839 0 0 I 61 * 3254 * * * * * 1266 * 1516 * * * * * * 2949 * * * 61 0 * * * * * * 2839 0 0 R 62 * * * * * * 3269 * * 3338 * * * * 530 3254 * * * * 62 0 * * * * * * 2839 0 0 K 63 * * * * * * * * 503 * * * * * 2389 * * * * 3269 63 0 * * * * * * 2839 0 0 K 64 * * * * * * * * 1338 3254 * * * * 1001 * * * * * 64 0 * * * * * * 2839 0 0 R 65 * 3986 * * * * * * 1526 * * 1995 * 3280 2083 * * * * * 65 0 * * * * * * 2839 0 0 M 66 4024 * * * * * * 4198 * 2169 1628 3254 * * * * * 2099 * * 66 61 * 4588 * * * * 2839 0 0 V 67 3958 * * * * * * * * 2430 * 4171 3253 * * * * 1384 * 2275 67 0 * * * * * 0 2876 0 1000 G 68 3253 * 3306 3044 * 1339 * * * * * 4260 * 2635 3960 * * * * * 68 156 3282 * 1578 589 0 * 2876 1451 1000 N 69 3269 * 3069 * * 4317 4367 3254 2145 4024 * 3603 4198 4359 * 4629 * * * 4055 69 72 4367 * 1000 1000 * * 2839 1000 0 R 70 * * * 4492 * 4024 3160 * 3269 * * * * 2735 1973 3076 4317 3254 * * 70 0 * * * * * * 2839 0 0 M 71 3254 * * 3469 * * * * 2567 3269 1403 * * * * * 3428 4024 * * 71 74 4317 * 2000 415 * * 2839 1000 0 F 72 * * * * 2092 3020 * * 3269 * 3069 * * * 3428 * * * 2772 2474 72 330 2292 * 1810 485 * * 2839 1694 0 I 73 4629 * * 3986 * * * 4619 3380 * 3254 * 901 * * * 3069 * * * 73 0 * * * * * * 2839 0 0 D 74 * * 3624 967 * * * 3652 3269 * * * * 5028 * * 2371 * * * 74 0 * * * * * * 2839 0 0 D 75 3652 * 1449 3254 * * * * 2327 * * * * * 2754 * 3297 * * * 75 123 3617 * 2000 415 * * 2839 1344 0 L 76 * * * * 2705 * * * 5028 3624 * * * * 2409 * * * 1300 2831 76 58 4657 * 2000 415 * * 2839 1000 0 H 77 * * * 2650 * * 1277 * 3005 * * * * * 2289 * 3338 * * * 77 0 * * * * * * 2839 0 0 N 78 * * 3194 2285 * * * * 3280 * * 1400 3254 * * 3338 * * * * 78 0 * * * * * * 2839 0 0 L 79 * * * * * * * * * 853 1549 * * * * 3254 * * * * 79 0 * * * * * * 2839 0 0 N 80 3539 * * 3097 * * * * 3254 * * 1729 * 2105 3269 * * 4198 * * 80 160 3254 * 2322 322 * * 2839 1000 0 K 81 * * * * * * * * 92 * * * * * * 4024 * * * * 81 0 * * * * * * 2839 0 0 R 82 * * * * * * * * * 3254 * * * * 160 * * * * * 82 0 * * * * * * 2839 0 0 I 83 * * * * * * * 160 * * * * * 3254 * * * * * * 83 0 * * * * * * 2839 0 0 S 84 * * * * * * * * 3269 3076 4024 2626 * * 1282 2805 * * * * 84 0 * * * * * * 2839 0 0 Y 85 * * * * 3700 * 4567 * * 3986 * * * * * * * * 4367 378 85 0 * * * * * * 2839 0 0 L 86 * * * * * * * * * 0 * * * * * * * * * * 86 0 * * * * * * 2839 0 0 Y 87 * * * * 2599 * * * * * 3269 * * * * * * * * 452 87 0 * * * * * * 2839 0 0 K 88 * * * * * * * * 486 * 3269 * * * 2456 * * * * * 88 0 * * * * * * 2839 0 0 H 89 * * * * 2058 * 2588 * 3254 * * * * 3269 2721 * * 2894 * 3338 89 0 * * * * * * 2839 0 0 F 90 * * * * 2320 * 3269 * * 1507 2436 * * * * * * 3254 * 4198 90 0 * * * * * * 2839 0 0 N 91 * * * * * * * * * * * 0 * * * * * * * * 91 0 * * * * * * 2839 0 0 R 92 * * * * * * 2894 * 2295 * * * * * 842 * * * * 3269 92 0 * * * * * * 2839 0 0 H 93 * * * * 5028 * 3020 * 2474 * * 2000 * * 1435 * * * * 4432 93 0 * * * * * * 2839 0 0 G 94 * * * * * 1308 * * * * * * * * * * 747 * * * 94 0 * * * * * * 2390 0 0 K 95 * * * * * * * * 318 * * * * * 2337 * * * * * 95 0 * * * * * * 2272 0 0 Y 96 * * * * 2584 * 1124 * * * * * * * * * * * * 1417 96 0 * * * * * * 1501 0 0 R 97 * * * * * * * * * * * * * * 0 * * * * * 97 0 * * 0 * * * 1501 0 0 //