HHsearch 1.5 NAME c4v1ad_ FAM FILE c4v1ad_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4v1ad_.a3m DATE Sat Oct 11 08:22:19 2014 LENG 99 match states, 99 columns in multiple alignment FILT 45 out of 49 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.1 EVD 0.4244 -0.3252 SEQ >ss_dssp CCCCSCSCCGGGSGGGGSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHTTSCCGGGTTCCCCCCCSSCC >sa_dssp EEEEEEEEDEEEEEEEEEEEEEEDDEEDDDEEDEEEEEEEDDDEECDEEEEDEEEDEEEDDEEDDDEDDEECEECDDEEEEEDEEDEEEEEEEEEEEEE >ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEECCCCCCCC >ss_conf 967898888998310127898788988999999999999999999999999999999999999999999738999999982155527610028999986 >Consensus xPieexxxxxxxxxexRxrpxxxlsxeexerrxxixkaWxxykxxqxxxxxxxlxxxxxsqxxAleELrxxSxeLyxaAxxxdxxlfPxxxxgPtxTPP >c4v1ad_ IPIEDFITPVKFLNKERQRPPVELPFEESERRALLLKRWSLYKQREHEMERSAIRSLLEAQEEALQELRLSSPELHAEATKRDPSLFPFERQGPDYTPP >UniRef50_Q9TZ90(70-169:189) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q9TZ90_CAEEL E=6e-19 s/c=0.95 id=32% cov=100% -PVDELTLDVKSAKNigERRRPRTELTLEQIDERAIALKDYTRSRLALQQEDDAWIRGAIESQRKALNELKMLKLELYEAAVQPAAKDLPLIVQGPSLTP P >UniRef50_B6K6Z2(10-104:107) Predicted protein n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K6Z2_SCHJY E=3e-06 s/c=0.56 id=22% cov=96% -----FDMLRRILYESPGRKPIPMDTAALRRHEYISLAWNLSRQEKRCQQSLQLRKQYQEMQRSCQELYEISRVLFDKAMaEPKERRFPVDMRIPTETPP >UniRef50_UPI00015B5B29(82-181:203) PREDICTED: similar to ENSANGP00000019899 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5B29 E=3e-24 s/c=1.12 id=35% cov=100% -PIFEMEVPMSLKQElgIRKRDLPALTTETLEERAALFKEWNKYKTKQHYQTLRLIDRYMFAQDKAISELKEVSEELYEAAIQIDPDLLPYSRKGPLNTA P >UniRef50_O14181(18-114:118) Putative 60S ribosomal protein C4F8.05c n=1 Tax=Schizosaccharomyces pombe RepID=YDS5_SCHPO E=4e-19 s/c=0.99 id=21% cov=98% ---ESIDLVRKALYGNKKVRSLKMNPDMWEKHEVINRAWRIHEYRQEKQRENLLKNQFSAMKIACEELKHTSETLYKAAMsDSINRRFPVETRTPTDTPP >UniRef50_Q2GZN6(99-198:233) Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GZN6_CHAGB E=0.0002 s/c=0.47 id=25% cov=64% ----------SILSPNRIPPPLRMGRNRHLRHWTIHRAWLLFRRREREARERNLMRQHQSMSAACEELRLTS--------------------------- >UniRef50_UPI000186E7C9(39-138:157) mitochondrial 50S ribosomal protein L40, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E7C9 E=1e-19 s/c=0.97 id=35% cov=100% -PIEENEIPICLMEDNKQQRSREINISEnvLYERMKILREWSKVKSNEMKSDIMLINRLITSQKQALNELRLESEELYQAAVRIDEKLIPFQFNGPSETP P >UniRef50_C5DM10(35-133:147) KLTH0G05060p n=2 Tax=Saccharomycetaceae RepID=C5DM10_LACTC E=1e-19 s/c=0.99 id=24% cov=99% --VQRVITQLSVMSAGRKQPKmLKLSREDLIKHQTIQNCWSMYQRELREKRNEQLRLQYKSTEKAMTLLEQLDPELFEAANASEaGKRFPLELKVPTEFP P >UniRef50_B0CRQ4(1-52:52) Predicted protein (Fragment) n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CRQ4_LACBS E=2e-06 s/c=1.03 id=24% cov=46% ----------------------------------IERAWLLHKRHLRKKRDAEVARKFKCMKEAMDELYKLDPKLYLEA-------------------- >UniRef50_Q5DHT0(75-162:242) SJCHGC09015 protein n=1 Tax=Schistosoma japonicum RepID=Q5DHT0_SCHJA E=1e-15 s/c=0.96 id=30% cov=88% -PVEDIEGDRQLMKEIklRQRLPIDISETELDERVGIWKKWTHYQANVAHREIIMLKKAIAAQQHALDCLYKTSPDLYKEAIKPCPELV----------- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 * * * * * * * 0 * * * * * * * * * * * * 1 0 * * * * * * 1933 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 3881 0 0 I 3 * * * * * * * 769 * 4266 * * * * * * * 1469 * * 3 0 * * * * * * 4184 0 0 E 4 * * 2476 931 3567 * * * 4125 * * * * 3696 * * * 3701 * * 4 0 * * * * * * 4470 0 0 D 5 * * 1509 1004 * * * * * * * * * * 3696 3776 * * * * 5 0 * * * * * * 4470 0 0 F 6 * * * * 1631 * * 2482 * 2208 3626 4517 * * * * 4424 3177 * * 6 0 * * * * * * 4648 0 0 I 7 * * 2415 1721 4686 * * 2048 * * * * * 3625 * * 4315 3924 * 5000 7 0 * * * * * * 4770 0 0 T 8 * * * 4482 4509 3934 * 3179 5206 2862 4117 * * * * * 1771 2183 * * 8 0 * * * * * * 4883 0 0 P 9 4628 * 2191 * * * * * * 3370 3949 * 1573 2787 * * * 3349 * * 9 0 * * * * * * 4883 0 0 V 10 3120 * * 4413 * * * 4924 4613 1940 3206 * 4118 * 2544 4992 5353 3692 * 4921 10 0 * * * * * * 4859 0 0 K 11 4728 4932 * 2998 * * * * 1667 * * * * 4112 3922 1452 * * * * 11 49 4894 * 0 * * * 5089 1000 0 F 12 3060 5420 * * 4047 * * 3712 * 1350 * * * * * 3613 * 2762 4027 4748 12 0 * * * * * * 5089 0 0 L 13 4582 * * 4748 * * * 5337 3031 1449 1905 * * 3843 * 3819 * * * * 13 0 * * * * * * 5089 0 0 N 14 4644 * 2701 3081 * * * * 2582 * * 3586 * 4991 * 2201 3884 * * 3046 14 55 4748 * 1000 1000 * * 5089 1000 0 K 15 2501 * 3450 1207 * 4545 * * 3732 * * 3663 3670 5434 * * * * * * 15 301 2409 * 1000 1000 * * 5089 2540 0 E 16 4685 * 4179 2991 * 5385 * 2544 3275 * * 3263 * 4313 3701 2407 4025 * * * 16 139 3449 * 1000 1000 * * 5102 1667 0 R 17 * * * * * * * * 3164 * 4662 * 4479 * 315 * * * * * 17 0 * * * * * * 5102 0 0 Q 18 * * * 4588 * 4479 4843 3903 1482 * 4412 * 4952 2008 4595 * * 3563 * * 18 0 * * * * * * 5102 0 0 R 19 4412 4952 * * * * * * * 5339 * * 5056 2272 697 * * 4575 * * 19 0 * * * * * * 5102 0 0 P 20 * * 4175 * * * 4952 * 3860 5108 * 4054 933 4295 3754 5439 3599 * * * 20 372 2337 5090 0 * * * 5102 2141 0 P 21 * * 5329 * * 5258 5611 3973 2972 1570 * * 2338 5689 4542 3320 * 4633 * * 21 36 5346 * 0 * 0 * 5080 1000 1000 V 22 5379 * * * * * * 2719 * 1767 * 5359 2733 4131 4957 * 3279 2616 * * 22 0 * * * * * * 5102 0 0 E 23 5011 * 4140 1626 * * * * 2286 * * 5019 3394 4471 3471 4133 * 3943 * * 23 58 * 4662 * * * * 5102 0 0 L 24 5325 * * * * * 4981 2539 * 892 3034 4881 * 5293 * * * 4293 * * 24 0 * * * * * 0 5037 0 1000 P 25 5405 4004 2906 * * 4994 * * * * * 3175 4139 * * 1191 2798 * * * 25 0 * * * * 0 * 5037 0 1000 F 26 4007 * * 2688 3049 * 4843 3627 * 4595 * 3456 2663 3772 3230 * 3721 * * * 26 0 * * * * * * 5102 0 0 E 27 4479 * 2651 627 * * * * * * * 5056 * * * 4022 4140 * * * 27 0 * * * * * * 5102 0 0 E 28 4479 * 2172 1326 * * * 5253 5052 5339 4575 * * 3935 5056 * 3471 5287 * * 28 47 4957 * 1000 1000 * * 5102 1000 0 S 29 * 4843 * 4131 3467 * 5056 3144 4764 1397 * * * 4482 * 2981 5728 5287 4575 * 29 0 * * * * * * 5102 0 0 E 30 * * 2890 1151 * * * 2438 * 4151 * * * 4070 4479 * * 4740 * 4957 30 0 * * * * * * 5102 0 0 R 31 * * * 1854 * * * * 2478 4843 * * * * 1129 4270 * * * * 31 0 * * * * * * 5102 0 0 R 32 * * * 5339 * * 1562 * * * * * * 5253 712 * * * * * 32 36 * 5339 * * * * 5102 0 0 A 33 1417 * * 3007 * * * 3467 4021 * 4932 * * 3119 3131 * * 4148 5022 * 33 0 * * * * * 0 5089 0 1000 L 34 2968 * * 4934 * 4112 * 3481 4932 1701 * * * * 5317 * 2269 3762 * 4458 34 0 * * * * 0 * 5089 0 1000 L 35 3833 * * * * * * 1098 * 1412 4838 * * * * * * 4266 * * 35 0 * * * * * * 4920 0 0 L 36 4990 * * 2059 4854 * 5613 * 5533 2033 3693 4886 * 2294 * 4744 * * 4182 * 36 0 * * * * * * 4920 0 0 K 37 4834 * * * * * 5420 * 1310 5101 4774 3800 * * 1614 * * 3753 * * 37 0 * * * * * * 5622 0 0 R 38 1054 3296 4245 2296 * * * * 3990 * * 5296 * 4695 6149 * 5707 * * * 38 0 * * * * * * 5622 0 0 W 39 * * * * * * * * * * * * * * * * * * 101 3890 39 0 * * * * * * 5622 0 0 S 40 3324 * * * * * * 5613 3344 3613 4419 3061 * 3680 3766 1906 3125 * * * 40 0 * * * * * * 5622 0 0 L 41 * * 4834 4460 * * 3810 3367 3349 1539 4288 * * * 2162 * * 4867 * * 41 0 * * * * * * 5622 0 0 Y 42 * * * 4460 2998 * 2510 * * 5289 * * * * * 3659 * 4313 * 1004 42 0 * * * * * * 5622 0 0 K 43 * 4867 * 5156 * * * 5093 1512 3562 * * * 2281 2026 * * * * 5518 43 0 * * * * * * 5622 0 0 Q 44 4676 * * * 5661 * 3334 * 3081 3243 4415 4774 * 2422 2055 5388 4168 * * 5156 44 0 * * * * * * 5622 0 0 R 45 3711 * 4433 3012 * * 4146 * 2361 * * 3052 * 2402 2865 * 4181 * * * 45 0 * * * * * * 5622 0 0 E 46 4834 * * 2126 * * * * 4292 2475 4867 * * 1495 4393 * * 3873 * * 46 0 * * * * * * 5622 0 0 H 47 3124 * 5511 5156 * * 1848 5241 3933 * 5388 * * 5016 1357 * * * 5613 * 47 0 * * * * * * 5622 0 0 E 48 * 5101 5213 1851 5171 * 5381 5289 2975 3541 * 5093 * 3405 3583 * 5241 3511 5562 4886 48 0 * * * * * * 5622 0 0 M 49 1923 * 5213 3592 5171 * * * 2754 * 3973 4867 * 3016 2849 4302 4664 * * * 49 0 * * * * * * 5622 0 0 E 50 * * 2135 1813 * * 6047 * 5213 * * 5171 * 4170 1704 * 4176 * * * 50 0 * * * * * * 5622 0 0 R 51 4867 * 4354 2004 5753 * * 3770 6115 2862 4578 3541 * 4422 3602 3464 4150 * * 5641 51 0 * * * * * * 5622 0 0 S 52 2608 * 4397 3903 * * 6229 3463 4165 3961 5388 4387 * 2919 2337 3758 5511 * * * 52 0 * * * * * * 5622 0 0 A 53 3517 5121 * 2704 * 5707 * 5004 4231 3241 3176 4861 * 2334 5093 * 4930 4375 3890 * 53 0 * * * * * * 5622 0 0 I 54 * * * * 5221 * 4460 1616 * 1052 4867 * * * 5540 * * 4716 * 5296 54 0 * * * * * * 5622 0 0 R 55 3769 * 3526 3395 * 5640 5540 5213 3113 5511 4213 3697 * 4443 1930 4033 6311 * * 5289 55 0 * * * * * * 5622 0 0 S 56 4633 * 4196 4834 * 5016 * * 2603 3495 5640 5156 * 4106 1534 3251 5093 * * * 56 0 * * * * * * 5622 0 0 L 57 3316 * * * * * * 3834 3818 2419 3791 * * 1495 * 4150 * 4203 * 4886 57 0 * * * * * * 5622 0 0 L 58 * * * 5171 3565 * 3957 3012 * 2808 3986 * * * * * * 2809 5213 1627 58 0 * * * * * * 5622 0 0 E 59 2849 * 4395 2393 4886 * 5213 * 2520 5093 5562 * * 2447 5661 4335 4129 * * 5171 59 0 * * * * * * 5622 0 0 A 60 1578 4730 * 4097 * 4833 * * 4774 * 4460 * * * * 1146 * * * * 60 0 * * * * * * 5622 0 0 Q 61 5420 * * * * * * 3609 * 4460 1924 * * 1063 4362 * 5416 4834 * * 61 0 * * * * * * 5622 0 0 E 62 4834 * 4886 2811 * 5121 5289 * 2916 * * 4462 * 1875 3335 4044 4651 4613 * 4525 62 0 * * * * * * 5622 0 0 E 63 4391 * 3908 2629 * * 5381 5156 2066 * * 2263 * 4302 3204 5289 4640 * * * 63 0 * * * * * * 5622 0 0 A 64 143 * * * * * * * * * * * * * * 4348 4460 * * * 64 0 * * * * * * 5622 0 0 L 65 * 2055 * * * * * 4886 * 1108 1935 * * * * * * * * * 65 0 * * * * * * 5622 0 0 Q 66 4221 * 2912 1404 5093 * * * 3744 5221 * 3028 * 3239 5707 4886 5416 * * * 66 0 * * * * * * 5622 0 0 E 67 * 5381 3757 619 * * 5562 * 4774 4526 4867 * * 4415 * * 5667 5420 5296 * 67 0 * * * * * * 5622 0 0 L 68 * * * * * * * * * 0 * * * * * * * * * * 68 0 * * * * * * 5622 0 0 R 69 5622 * * 4095 * * * * 1620 * * * * 3222 1356 * * * * 3349 69 0 * * * * * * 5659 0 0 L 70 3923 * * 2469 * 4942 4981 * 3079 2005 3850 * * 2585 4114 * * 5159 * * 70 0 * * * * * * 5016 0 0 S 71 * * * 2044 * * * 3726 * 1874 5785 * * * * 5749 2449 2402 * * 71 0 * * * * * * 5016 0 0 S 72 * * 2485 * * * * * 4774 * * 4844 * * * 415 * * * * 72 0 * * * * * * 5106 0 0 P 73 4698 * * 1870 * 3163 * * 5183 4583 * * 1186 5001 4785 * * * * * 73 0 * * * * * * 5148 0 0 E 74 * * 4207 1030 4310 4698 5330 * 3482 * * * 4782 5183 5458 4147 4749 3787 * * 74 53 4782 * 2807 222 * * 5148 1000 0 L 75 * * * * 4788 * * * * 104 4899 * * * * * * * * * 75 0 * * * * * * 5148 0 0 H 76 * * * * 1780 * 3839 * * * * * * * * * * * * 646 76 0 * * * * * * 5148 0 0 A 77 3603 * 4785 1901 * * * 4952 2716 4638 * 3775 * 2473 3739 4788 * * * 5330 77 0 * * * * * * 5148 0 0 E 78 793 * * 2377 * * * * 3156 * 5157 * * 5672 * * * 3825 * * 78 0 * * * * * * 5148 0 0 A 79 0 * * * * * * * * * * * * * * * * * * * 79 0 * * * * * * 5148 0 0 T 80 * * * * * 5068 * 2292 * 2587 3174 2968 * * * 4847 3266 2170 * * 80 193 3000 * 0 * * * 4912 2057 0 K 81 2837 * 3373 2859 * 5068 * * 2946 5447 * * * 1839 3065 4498 * * * * 81 33 5468 * 0 * * * 4912 1000 0 R 82 5049 * * 5068 5031 * * 3035 4111 4328 4498 * 1809 5660 3674 3522 5447 2817 * * 82 43 5083 * 0 * * * 4912 1000 0 D 83 4620 4308 720 3579 * 5041 * 4586 3119 * * 5016 * * * * * * * * 83 126 3579 * 0 * * * 4866 1419 0 P 84 4620 * 3701 2526 * 2435 * * * 3578 * 4586 1444 * * 5016 * * * * 84 0 * * * * * * 4866 0 0 S 85 * 4714 4818 3628 * 4313 * * 2205 3649 * 3315 * 4171 2907 2465 * 5145 * * 85 34 5440 * 4755 54 * * 4866 1000 0 L 86 * * 4620 * 3868 * * 4967 4524 927 * * * * 2125 * * * * 4057 86 139 3445 * 2954 199 * * 4866 1809 0 F 87 * * * 4463 942 * * 4132 * 1658 * * * * * * * 4057 * * 87 59 4638 * 0 * * * 4854 1000 0 P 88 * * * * * 4449 * * * * * 4638 186 * * * 4824 * * * 88 0 * * * * * * 4799 0 0 F 89 * 4824 * * 2039 * * 2852 * 2307 4148 * * * 5324 * * 3112 * 2444 89 0 * * * * * * 4799 0 0 E 90 3806 * 3643 1221 * * * 4523 3568 5233 * 5270 * 2955 * 4763 4907 4638 * * 90 0 * * * * * * 4799 0 0 R 91 3568 3890 * * 4849 * 5270 5233 4565 2709 2465 * * * 3756 4338 4532 3285 4449 3843 91 0 * * * * * * 4799 0 0 Q 92 5083 * * 4068 * * * * 2800 * * 3860 * 3135 1528 4907 3392 3196 * * 92 0 * * * * * * 4799 0 0 G 93 * * * * * 670 * 3666 * * * * * * 5083 * 4532 2185 * * 93 0 * * * * * * 4799 0 0 P 94 * * * * * * * * * * * * 0 * * * * * * * 94 43 5083 * 0 * * * 4799 1000 0 D 95 * 5344 4099 * * * 5567 * * 4763 * * 4449 * * 3264 937 2419 * * 95 0 * * * * * * 4799 0 0 Y 96 4173 * 2358 1715 4872 * 4905 * * 3579 * 4024 * * 4195 * 4449 * * 2922 96 0 * * * * * * 4799 0 0 T 97 * * * * 3083 * * * * * * * * * * * 291 * * 3957 97 0 * * * * * * 4799 0 0 P 98 4763 * * * * * * * * 3660 * * 178 * * * * * * * 98 0 * * * * * * 4799 0 0 P 99 * * * * * * * * * * * * 0 * * * * * * * 99 0 * * 0 * * * 4586 0 0 //