HHsearch 1.5
NAME  c4v0uI_
FAM   
FILE  c4v0uI_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c4v0uI_.a3m 
DATE  Sat Mar 28 08:17:26 2015
LENG  26 match states, 26 columns in multiple alignment
FILT  1 out of 3 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.0 
EVD   0.5436  4.4187 
SEQ
>ss_pred
CCCHHHHHHHHHHHCCCCCCCCCCCC
>ss_conf
93006998899985376310100379
>Consensus
kkvtfleevteyyisgdedrxxxxxx
>c4v0uI_
KKVTFLEEVTEYYISGDEDRXXXXXX
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
K 1    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1000	0	0	

K 2    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1000	0	0	

V 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	3
       0	*	*	*	*	*	*	1000	0	0	

T 4    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	4
       0	*	*	*	*	*	*	1000	0	0	

F 5    *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1000	0	0	

L 6    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1000	0	0	

E 7    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1000	0	0	

E 8    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1000	0	0	

V 9    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	9
       0	*	*	*	*	*	*	1000	0	0	

T 10   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	10
       0	*	*	*	*	*	*	1000	0	0	

E 11   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1000	0	0	

Y 12   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	12
       0	*	*	*	*	*	*	1000	0	0	

Y 13   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	13
       0	*	*	*	*	*	*	1000	0	0	

I 14   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1000	0	0	

S 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	15
       0	*	*	*	*	*	*	1000	0	0	

G 16   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1000	0	0	

D 17   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1000	0	0	

E 18   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1000	0	0	

D 19   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1000	0	0	

R 20   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	20
       0	*	*	*	*	*	*	1000	0	0	

X 21   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	21
       *	*	*	*	*	*	*	1000	0	0	

X 22   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	22
       *	*	*	*	*	*	*	1000	0	0	

X 23   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	23
       *	*	*	*	*	*	*	1000	0	0	

X 24   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	24
       *	*	*	*	*	*	*	1000	0	0	

X 25   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	25
       *	*	*	*	*	*	*	1000	0	0	

X 26   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	26
       0	*	*	0	*	*	*	1000	0	0	

//