HHsearch 1.5 NAME c4ui2C_ FAM FILE c4ui2C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ui2C_.a3m DATE Sat May 9 08:18:20 2015 LENG 80 match states, 80 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4584 1.2904 SEQ >ss_dssp CCCCHHHHHHHHHHHHHCCCSHHHHHHHHHHHHHHSGGGGTTCHHHHHHHHHHHHHTTTTTCCCCSSCCCCCCCCCCCCC >sa_dssp EEBEAEEBCDDBDEECEEEDEEBEBADDBCCCBEECCEDAEECEDBDDBDEDBDEDCEEEECEEEEEEEEEEEEEDEEEE >ss_pred CCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >ss_conf 98720335845664317788899999999999984126516862113567868999974589878688866100123479 >Consensus sxCxixxCxxxyvaxtxxxxxxCraLrxYxxCxxrtakxCRGdlxYHSavxxixdLmxxxnCxxxxxxxxxxxxCglFGD >c4ui2C_ AQCRIQKCTTDFVSLTSHDSEFCKALRAYAGCTQRTSKACRGNLVYHSAVLGISDLMSQRNCSDPCNYHPSYLFCGLFGD >UniRef50_Q7SYK8(37-155:415) Zgc:66326 n=10 Tax=Euteleostomi RepID=Q7SYK8_DANRE E=3e-12 s/c=0.61 id=58% cov=99% --CRIQRCNAEYVASFSpsgglqeevhPDVDYCIALRAYSLCTRRTARACRGDLVYHSAVFRIKELFAQHNCSsdgptssakapstskptvvDICNYesr vlasgpaaqQKKYGHCGLFGD >UniRef50_Q1JQE7(37-158:410) Hemochromatosis type 2 n=7 Tax=Clupeocephala RepID=Q1JQE7_DANRE E=7e-22 s/c=0.85 id=59% cov=101% AQCRILRCNSDFVAATLEsgvigggnkegvNTGYCSALRSYALCTQRTARACRGDLAYHSAVQGIEDLLIQYRCpkagptaqpqprplpqaplsGDGCFY EkgfiqregraPEYLHCGVFGD >UniRef50_C3YNU0(80-188:478) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YNU0_BRAFL E=4e-21 s/c=0.94 id=48% cov=101% ADCRVTKCNSEFVASTSalnpaHQRDlvlYCRALRQATQCARRTARQCRGDLHYHSTIRGFADLMQSHNCThvsdEPVPTRPTqeqlpqmcayrggsntv YRHCGLFGD >UniRef50_Q6ZVN8(35-172:426) Hemojuvelin n=23 Tax=Coelomata RepID=RGMC_HUMAN E=3e-19 s/c=0.69 id=54% cov=101% SQCKILRCNAEYVSSTlslrgggssgalrggggggrgggVGSGGLCRALRSYALCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSrqgptapppprgpa lpgagsglpapDPCDYEgrfsrlhgrpPGFLHCASFGD >UniRef50_UPI000180C43C(89-226:687) PREDICTED: similar to RGM domain family, member A isoform 2 n=2 Tax=Ciona intestinalis RepID=UPI000180C43C E=0.0007 s/c=0.33 id=37% cov=79% ------------------TRQRCRALRKYRRCIDKNHLPCRGNLFFHSVEHINSRQLEEYSCTnsktknpprttatprtkpppqntttmppkrhfpedea avegDTCTYTGKsaFRHCGMFGD >UniRef50_UPI0001791E26(23-124:387) PREDICTED: similar to RGM domain family, member B n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791E26 E=1e-15 s/c=0.83 id=35% cov=99% --CVPVPCPQDTCALSDVKDNQCRDLDAYLKCMKSLSKKCRGDIGYHSAITvsnsefkkkciGHEDFSRNNSgensqmvpsthnaCPMLFDDKKEHRFCG LFGD >UniRef50_UPI0000E492DC(38-107:464) PREDICTED: similar to dragon-like muscle; DL-M; HFE2; Rgmc n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E492DC E=4e-15 s/c=1.18 id=37% cov=79% SACDILWCSYQYEADTDpldpgPYPDFCRALQRYQRCVDRISPgSCRGDLHYHSTKTVIPDLQRNYEC------------------ >UniRef50_UPI000186E67F(8-130:407) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186E67F E=7e-15 s/c=0.66 id=34% cov=99% --CKADFCSSQYTESLDrekidrpePTEASCKILRNFGKCLRMTAKECHGNIPYHSSIVMVKQLSKENNCEAligpektlpsppllrpsiipklPVNTVP vsvvtqrsctflgknKFRYCGLFGD >UniRef50_A7SXD8(43-124:442) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SXD8_NEMVE E=3e-11 s/c=0.85 id=25% cov=99% SSCQVQpKCTDPYVQREADTAfKLCASLKLYKLCLDRIRKQCRGSggIYYNTVRTLVPVLMRNHKCDNVTLPEKEKGLLNIF-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 1328 * * * * * * * * * * * * * * 733 * * * * 1 0 * * * * * * 2387 0 0 Q 2 2546 * 2775 * * * * * * * * * 3274 1447 * 2234 * * * * 2 0 * * * * * * 2387 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 3024 0 0 R 4 * * 3509 * * * * * 1834 * * * * 2667 1586 * * 2825 * * 4 0 * * * * * * 3024 0 0 I 5 2924 * * * * * * 1072 * * * * 2825 * * * * 1992 * * 5 0 * * * * * * 3024 0 0 Q 6 * * 2924 * * * * * * 1655 * * * 1663 * * 3413 2825 * * 6 247 2667 * 0 * * * 3024 1000 0 K 7 * * * * 2924 * * * 1324 * * * 2825 * 2059 * * * 3509 * 7 0 * * * * * * 3024 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 3024 0 0 T 9 * * * * * * * * * * * 1313 2825 * * 2187 2078 * * * 9 0 * * * * * * 3024 0 0 T 10 2654 * 2667 * * * * * * * * * * 2825 * 1414 3656 * * 3509 10 0 * * * * * * 3024 0 0 D 11 * * 1730 1637 * * * * * * * * 2667 2187 * * * * * * 11 0 * * * * * * 3024 0 0 F 12 * * * * 1631 * * * * * * * * * * * 2825 * * 900 12 0 * * * * * * 3024 0 0 V 13 * 2825 * 3509 * * * * * * * * * * * * 2924 810 3863 * 13 0 * * * * * * 3024 0 0 S 14 1051 * * 2924 * * * * * * * * * 2667 * 2133 * * * * 14 0 * * * * * * 3024 0 0 L 15 2740 * 3509 * * * * * * 2182 * * * * 2667 1379 * * * * 15 0 * * * * * * 3024 0 0 T 16 * * * 2667 3663 * * * * 2924 * * * * * 2825 1027 * * * 16 120 3644 * 4524 64 * * 3024 1000 0 S 17 2667 * 1471 * * * * * * 3626 * * * * * 1640 * 3644 * * 17 892 1117 * 2815 221 * * 3024 2284 0 H 18 * * 2144 3626 * 3644 2530 * * * * * 1744 * * * * 2825 * * 18 122 3626 * 3585 126 * * 3024 1000 0 D 19 * * 2802 * * * * * 2966 * * 3776 * 3557 * 3836 1245 * * 3669 19 0 * * * * * * 3191 0 0 S 20 2779 * 2966 3062 * 3836 * * * * * * 2820 * 2485 3800 3776 3805 * * 20 227 2779 * 0 * * * 3191 1000 0 E 21 3062 * 2088 2891 * 2806 * * 2779 * * 2966 * 3416 * * * * * * 21 128 3557 * 1585 585 * * 3191 1000 0 F 22 * * * * 2228 * * * * 2213 * * * 2966 3416 3062 * * * 2123 22 0 * * * * * * 3191 0 0 C 23 * 0 * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 3191 0 0 K 24 2261 * * * * * * 3805 2384 * * * * * 1135 3776 * * * * 24 0 * * * * * * 3191 0 0 A 25 721 * 2966 * * * * 3062 * * * * * * * 2779 * * * * 25 0 * * * * * * 3191 0 0 L 26 * * * * * * * * * 0 * * * * * * * * * * 26 0 * * * * * * 3191 0 0 R 27 * * 2966 * * * * * 2779 * * * * 3669 627 * * * * * 27 0 * * * * * * 3191 0 0 A 28 1882 * * * * * * * 3416 2779 * 3062 * 3557 3669 2279 * * * * 28 0 * * * * * * 3191 0 0 Y 29 3557 * * * 3062 * * * * * * * * * * * * * * 330 29 0 * * * * * * 3191 0 0 A 30 1848 * * * * 3062 * * 2779 2966 * * * 3669 3416 3805 3557 * * * 30 0 * * * * * * 3191 0 0 G 31 * * * * * 3800 * * 2013 1241 * * * 3557 2537 * * * * * 31 0 * * * * * * 3191 0 0 C 32 * 0 * * * * * * * * * * * * * * * * * * 32 0 * * * * * * 3191 0 0 T 33 3557 * * * * * * 3416 * 1914 2966 * * * * * 1517 3669 * * 33 0 * * * * * * 3191 0 0 Q 34 * * 1653 * * * * * 2966 * * * * 2788 1289 * * * * * 34 0 * * * * * * 3191 0 0 R 35 * * * * * * * * 3416 * 3062 * * * 603 2966 * * * * 35 0 * * * * * * 3191 0 0 T 36 * * * * * * * 2157 * 2966 * 3416 * * * * 852 * * * 36 0 * * * * * * 3191 0 0 S 37 1014 * * * * * 3113 * * * * * * * 2820 2014 * * * * 37 0 * * * * * * 3183 0 0 K 38 * * * * * * * * 1201 3113 * * 3874 * 1391 * * * * * 38 102 3874 * 0 * * * 3183 1000 0 A 39 2317 * * 3134 * * * * 3142 * * * 3113 2143 * 3874 2626 * * * 39 0 * * * * * * 3183 0 0 C 40 * 0 * * * * * * * * * * * * * * * * * * 40 0 * * * * * * 3183 0 0 R 41 * * * * * * 3134 * * * * * * * 174 * * * * * 41 0 * * * * * * 3183 0 0 G 42 * * * * * 0 * * * * * * * * * * * * * * 42 0 * * * * * * 3183 0 0 N 43 * * 829 * * * * * * * * 1758 * * * 2820 * * * * 43 220 2820 * 1000 1000 * * 3183 1000 0 L 44 * * * * * * * 1439 * 664 * * * * * * * * * * 44 0 * * * * * * 3183 0 0 V 45 2473 * * * 3113 3142 2708 * * * * * 3134 * * * * 2454 * 2820 45 0 * * * * * * 3183 0 0 Y 46 * * * * 2518 * * * * * * * * * * * * * * 277 46 0 * * * * * * 3183 0 0 H 47 * * * * * * 220 * * * * 2820 * * * * * * * * 47 0 * * * * * * 3183 0 0 S 48 4354 * * * * * * * * * * * * * * 305 2820 * * * 48 0 * * * * * * 3183 0 0 A 49 1071 * * * * * * * * * * * * * * 3134 2708 1959 * * 49 0 * * * * * * 3183 0 0 V 50 * * * 3113 * * * 1681 3874 * * * * * 2820 * * 1463 * * 50 0 * * * * * * 3183 0 0 L 51 * * * * 3891 * 1849 * * 3918 * * * 3898 3560 * 1630 3134 * * 51 173 3142 * 3459 138 * * 3183 1000 0 G 52 * 4354 * * * 1170 * 3113 * 2820 3134 * * * 3891 * * 3874 * * 52 0 * * * * * * 3183 0 0 I 53 * * * * 3560 * 3142 1215 * * * 3113 * * * * * 1969 * * 53 0 * * * * * * 3183 0 0 S 54 3560 * * 1546 * * * * 2464 * * * 2253 * * 2460 * * * * 54 0 * * * * * * 3183 0 0 D 55 * * 833 3891 * * * * * * * * * 3134 3113 * * 2820 * * 55 0 * * * * * * 3183 0 0 L 56 * * * * 3142 * * * * 375 * * * 3113 * * * * * * 56 0 * * * * * * 3183 0 0 M 57 * * * * 3891 * * * * 2453 1137 * * 3874 * 2138 * * * * 57 0 * * * * * * 3183 0 0 S 58 3891 * * 3113 * * * 2515 3134 * * * * 3560 1630 3055 * * * * 58 0 * * * * * * 3183 0 0 Q 59 * * * 2124 * * * * * * * 1630 * 1463 * 3560 * * * * 59 0 * * * * * * 3183 0 0 R 60 * * * * * * 1133 * * * * 2138 * * 3918 * * * * 1995 60 0 * * * * * * 3183 0 0 N 61 * * * 3874 * * * * 2820 * * 1017 * * 3898 2127 * * * * 61 173 3142 * 3700 115 * * 3183 1000 0 C 62 * 0 * * * * * * * * * * * * * * * * * * 62 108 3796 * 4322 74 * * 3183 1000 0 S 63 * * 2747 3088 * 3773 * * * * * * 3047 * * 1638 2197 * * * 63 774 1269 * 4600 61 * * 2993 2008 0 D 64 3088 * 1299 2705 * * * * * * 3047 2747 * * 4247 * * * * * 64 269 2554 * 4484 66 * * 2993 1596 0 P 65 * * * * * 3773 * 2908 * 2526 * * 1530 * * * 3004 2747 * * 65 0 * * * * * * 2993 0 0 C 66 * 946 * * 3047 * * * * * * * * * * * 2747 2245 * * 66 0 * * * * * * 2993 0 0 N 67 * * 2074 * 3773 * 4058 * * 2747 * 1930 3421 * * * 3004 * * * 67 0 * * * * * * 2993 0 0 Y 68 * * 3047 * * * * * * * * * 2747 * * * 2245 * * 946 68 110 3772 * 3585 126 * * 2993 1000 0 H 69 * * * 1327 * * 3804 * 3047 * * * * 3772 3421 * 3004 3088 * * 69 414 2002 * 3288 156 * * 2993 1400 0 P 70 * * * * * 3004 * * 1543 * * * 910 * * * * * * * 70 181 3088 * 3907 100 * * 2993 1000 0 S 71 * * 4247 1543 * 3971 * * 1664 * * 4058 * * * 3804 3421 * * * 71 355 2197 * 3067 183 * * 2993 1553 0 Y 72 * * * * 1708 * 3047 * 2747 * * * * * * * * * * 1238 72 0 * * * * * * 2993 0 0 L 73 * * * * * 2170 * * * 2262 * * * 4247 1131 * 4058 * * * 73 0 * * * * * * 2993 0 0 F 74 * * * * 2377 * 887 * * 2747 * * * * * * * * * 3088 74 0 * * * * * * 2993 0 0 C 75 * 233 * * * * * * * 2747 * * * * * * * * * * 75 0 * * * * * * 2993 0 0 G 76 3102 * * * * 445 * * * * * 2747 * * * * * * * * 76 0 * * * * * * 2993 0 0 L 77 4247 * * * * * * 2747 * 898 3004 * * * * 3971 * 3773 * * 77 0 * * * * * * 2993 0 0 F 78 * * * * 0 * * * * * * * * * * * * * * * 78 0 * * * * * * 2993 0 0 G 79 * * * * * 0 * * * * * * * * * * * * * * 79 0 * * * * * * 2675 0 0 D 80 * * 0 * * * * * * * * * * * * * * * * * 80 0 * * 0 * * * 2675 0 0 //