HHsearch 1.5 NAME c4uf2A_ FAM FILE c4uf2A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4uf2A_.a3m DATE Sat Aug 8 08:35:16 2015 LENG 136 match states, 136 columns in multiple alignment FILT 6 out of 10 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.7 EVD 0.4019 -2.0801 SEQ >ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHSSSCCCTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HHCSSSCTHHHHHHHTTHHHHHHHTTHHHHHHHHCC >sa_dssp EEEEEDEDDDDEEEDEDCEDDDDDEDEECEEEDDDCCDDCDECBDEBBEEDEEDBDEDBDEBCEDEDECDDBCDDCCEDAEEDDDCDBBBDBCABBCBBD EDBEEDEDDDBDDBCDEEBDECBEDECEDBCEDBCE >ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC >ss_conf 9454889999999999977665556763022279999999999999988731069999989853110078899999999862278214899999999999 984101641578888999997505115689987409 >Consensus xxxxxxxxixnvLxiYLndxxixxxkxxLsxxExxlLxxIxxxCexIxxxYxxxxnsixxxixxddxxxxnVkxxIixxlxxDsrPSvkLAtlSLlSxIi ekxxxxxxxxxxxxLxxeivxxisxxxxdxIxFixx >c4uf2A_ AAIEFDEIVKKLLNIYINDICTTGEKRLLNNYEKSILDRIYKSCEYIKKNYELDFNSMYNQININDITTSDIKSKIIEALLIDSRPSVKLATLSFISLIA EKWGEKNRAKIMEILSNEIVEKISNNGKDFIDFIDR >UniRef50_Q1HTP9(86-202:250) C14R n=1 Tax=Squirrel poxvirus RepID=Q1HTP9_9POXV E=6e-31 s/c=1.15 id=27% cov=85% -------IVRNVLFIYLQECLLRGMRRSLSDSDTELLEAIERSCSIIDSRYRASMDSMVDAVDASarDLVMSTVRRGIQS----DSH-GESMATLALCSS VVERWARDGMTGRALDLTEDIVETVNPDS--------- >UniRef50_Q85295(5-125:166) Apoptosis regulator M11L n=37 Tax=Leporipoxvirus RepID=Q85295_9POXV E=0.0001 s/c=0.40 id=26% cov=83% ---------------YLNDVDITE------CTEMDLLCQLSNCCDFINETYAKNYDTLYDIMERDILSYNivNIKNTLTFALR-DASPSVKLATLTLLAS VIKKLNKIQHTDAAMF--SEVIDGIVAEEQQVIGFIQK >UniRef50_P32222(8-102:167) Uncharacterized protein C10 n=2 Tax=Swinepox virus RepID=VC10_SWPVK E=9e-16 s/c=0.89 id=34% cov=67% --------IRNVLYVYLKYNTI----NKLSRYERMIYTKIKNQCEAIKYRYCNDFNSVTCILEYDENKYiDNVHKEVISILLSDSRPSIKLAAISLLSII IDK---------------------------------- >UniRef50_A7XCC0(1-140:176) Mitochondria anti-apoptotic factor n=3 Tax=Yatapoxvirus RepID=A7XCC0_9POXV E=1e-13 s/c=0.56 id=35% cov=100% NSCNFNNSIKNVIVFYINEKALIEEKKMLSCYENKLLNLIKEDCENIMLKYKPNLSYICSLLKVDDTSEENIKHikdQIVESLENDNRPSVKLAIISLIS MIVEMNGYKGKNIPMSFLIEDIALKISENSEDLINFIN- >UniRef50_A5HKX8(3-135:176) Anti-apoptosis virulent factor n=5 Tax=Capripoxvirus RepID=A5HKX8_9POXV E=1e-06 s/c=0.56 id=37% cov=95% ---NYNYNIEKVLNVYLRDLRI----ESLNNNELAILIMIRECCEVIKKDYKTEFNEICNFILHNNVKScydiNDVKNIIIETINSDFRPSVILASISLL SVIIKKKKNENNEVVNDDLAlNELINTFSSYQKDIISFVE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 1000 * * * * * * * * * * 1000 * * * * * * * * 1 0 * * * * * * 1563 0 0 A 2 1000 * * * * * * * * * * * * * * 1000 * * * * 2 0 * * * * * * 1563 0 0 I 3 * 1000 * * * * * 1000 * * * * * * * * * * * * 3 0 * * * * * * 1563 0 0 E 4 * * * 1618 * * * * * * * 569 * * * * * * * * 4 0 * * * * * * 1967 0 0 F 5 * * * * 573 * * * * * * * * * * * * * * 1610 5 0 * * * * * * 1967 0 0 D 6 * * 1618 * * * * * * * * 569 * * * * * * * * 6 0 * * * * * * 1967 0 0 E 7 * * * 1618 * * * * * * * 1529 * * * * * * * 1610 7 0 * * * * * * 1967 0 0 I 8 * * * * * * * 1002 * * * 2012 * * * 1984 * * * * 8 0 * * * * * * 2446 0 0 V 9 * * * * * * * 785 * * * * * * * * * 1253 * * 9 0 * * * * * * 2609 0 0 K 10 * * * 2447 * * * * 1331 * * * * * 1254 * * * * * 10 0 * * * * * * 2609 0 0 K 11 * * * * * * * * 1425 * * 672 * * * * * * * * 11 0 * * * * * * 2609 0 0 L 12 * * * * * * * * * 2403 * * * * * * * 302 * * 12 0 * * * * * * 2609 0 0 L 13 * * * * * * * 2263 * 337 * * * * * * * * * * 13 0 * * * * * * 2609 0 0 N 14 * * * * 2118 * * * * * * 1425 * * * * * 2263 * 2405 14 0 * * * * * * 2609 0 0 I 15 * * * * 2263 * * 1253 * * * * * * * * * 1426 * * 15 0 * * * * * * 2609 0 0 Y 16 * * * * * * * * * * * * * * * * * * * 0 16 0 * * * * * * 2863 0 0 I 17 * * * * * * * 1605 * 575 * * * * * * * * * * 17 0 * * * * * * 2863 0 0 N 18 * * * * * * * * 2644 * * 1031 * 2331 2719 * * * * * 18 0 * * * * * * 2863 0 0 D 19 * * 1089 1435 * * * * * * * * * * * * * * * 2644 19 0 * * * * * * 2863 0 0 I 20 * 2331 * * * * * 2665 2547 2719 * 2644 * * * * * 2638 * * 20 0 * * * * * * 2863 0 0 C 21 2547 2665 2638 * * * * * * 2331 * * * * 2719 * 2644 * * * 21 0 * * * * * * 2863 0 0 T 22 * * * * * * * 1082 * 1435 * * * * * * 2665 * * * 22 539 * 1681 * * * * 2863 0 0 T 23 * * * * * * * 2004 * * * * * * 1941 * 1028 * * * 23 0 * * * * * 0 2481 0 1516 G 24 * * * 1022 * 979 * * * * * * * * * * * * * * 24 402 * 2039 * * * 0 2481 0 1516 E 25 * * * 591 * * * * * * 1573 * * * * * * * * * 25 0 * * * * * 0 2065 0 1941 K 26 * * * * * * * * 591 * * * * * 1573 * * * * * 26 0 * * * * 602 1551 2065 0 1941 R 27 * * * 2447 * * * * 2263 * * 2405 * * 1253 * * * * * 27 0 * * * * * 0 2609 0 1000 L 28 * * * * * * * * 2405 2403 2263 * * * * 1273 * * * * 28 0 * * * * * 0 2609 0 1000 L 29 * * * * * * * * * 0 * * * * * * * * * * 29 0 * * * * * 0 2609 0 1000 N 30 * * * * * * * * * * * 1425 * * * 672 * * * * 30 0 * * * * 0 * 2609 0 1000 N 31 * 1592 2331 * * * * * * * * 1691 * * 2644 * * * * * 31 0 * * * * * * 2863 0 0 Y 32 * * * * * * * * * * * 2719 * * * 2331 2638 * * 1033 32 0 * * * * * * 2863 0 0 E 33 * * 2331 320 * * * * * * * * * * * * * * * * 33 0 * * * * * * 2863 0 0 K 34 * * * * * * * * 2665 2719 2638 2547 * * 2644 * 2331 * * * 34 0 * * * * * * 2863 0 0 S 35 2719 * 2638 2331 * * * * 2547 * 2644 * * * * 2665 * * * * 35 0 * * * * * * 2863 0 0 I 36 * * * * * * * 1091 * 915 * * * * * * * * * * 36 0 * * * * * * 2863 0 0 L 37 * * * * * * * * * 251 * * * * * * * * * 2644 37 0 * * * * * * 2863 0 0 D 38 * 2638 2665 2331 * * * 2719 * * * 2547 * * * * 2644 * * * 38 0 * * * * * * 2863 0 0 R 39 2331 * * * * * * * 2644 2547 2719 * * 2638 2665 * * * * * 39 0 * * * * * * 2863 0 0 I 40 * * * * * * * 253 * 2638 * * * * * * * * * * 40 0 * * * * * * 2863 0 0 Y 41 * * * 2331 * * * * 1595 * * * * * 2719 2638 * * * 2665 41 0 * * * * * * 2863 0 0 K 42 * * * 1630 * * * * 2665 * * 1641 * * 2331 * * * * * 42 0 * * * * * * 2863 0 0 S 43 * 1678 2547 * * * * * * * * * * 2644 * 1488 * * * * 43 0 * * * * * * 2863 0 0 C 44 * 0 * * * * * * * * * * * * * * * * * * 44 0 * * * * * * 2863 0 0 E 45 * * 2638 642 * * * * * * * * * * * 2331 * * * * 45 0 * * * * * * 2863 0 0 Y 46 2644 * * * 2638 * * 2331 * * * 2547 * * * * * 2719 * 2665 46 0 * * * * * * 2863 0 0 I 47 * * * * * * * 0 * * * * * * * * * * * * 47 0 * * * * * * 2863 0 0 K 48 * * 2331 * * * * * 1091 * 2547 2638 * * * * * * * * 48 0 * * * * * * 2863 0 0 K 49 * * * 2638 * * * * 1691 2547 * * * * * 2331 * * * 2644 49 0 * * * * * * 2863 0 0 N 50 * * 2719 * * * * * 2547 * * 2665 * * 1479 * 2638 * * * 50 0 * * * * * * 2863 0 0 Y 51 * * * * * * * * * * * * * * * * * * * 0 51 0 * * * * * * 2863 0 0 E 52 2638 2644 * 2665 * * * * 1630 * * * * * 2331 * * * * * 52 0 * * * * * * 2863 0 0 L 53 2331 * * * * * * * 2638 2665 * 2644 2547 * * * 2719 * * * 53 0 * * * * * * 2863 0 0 D 54 * * 1654 2719 * * * * * * * 1592 * * * 2331 * * * * 54 0 * * * * * * 2863 0 0 F 55 * * * * 1091 * * * * 2547 2331 * * * * * * * * 2638 55 0 * * * * * * 2863 0 0 N 56 * * 1477 * * * * * * * * 1091 * * * 2547 * * * * 56 0 * * * * * * 2863 0 0 S 57 * * * 2719 * * * * * * * * * * * 954 2638 * * 2547 57 0 * * * * * * 2863 0 0 M 58 * * * * * * * 1630 * 2638 1488 * * * * * * 2644 * * 58 0 * * * * * * 2863 0 0 Y 59 * 1630 * * * * * * * * * * * * * * 2644 2331 * 1651 59 0 * * * * * * 2863 0 0 N 60 * 2644 1477 * * * * * * * * 1691 * * * 2547 * * * * 60 0 * * * * * * 2863 0 0 Q 61 2331 * * * 2719 * * 1641 * 2547 * * * 2665 * * * * * * 61 0 * * * * * * 2863 0 0 I 62 * * * * * * * 1691 * 1595 2638 * * * * * * 2331 * * 62 0 * * * * * * 2863 0 0 N 63 * * 2331 1641 * * * * 2547 2719 * 2665 * * * * * * * * 63 0 * * * * * * 2863 0 0 I 64 2331 * * * * * 2719 2665 * * * * * * 2638 * * 2547 * 2644 64 0 * * * * * * 2863 0 0 N 65 * * 1024 * * * * * * * * 1691 * * * 2331 * * * * 65 320 2331 * 1000 1000 * * 2863 1000 0 D 66 * * 923 2644 * * * 2638 * * * 2719 * * * * * * * * 66 0 * * * * * * 2863 0 0 I 67 * * * * * * * 2665 * 1477 * 2644 * * * * 2547 2719 * * 67 0 * * * * * * 2863 0 0 T 68 * * * * * * * * 1681 * * * * * * 1592 2665 2331 * * 68 0 * * * * * * 2863 0 0 T 69 * * * 2547 * * * * * * 2331 * * * * 2719 2665 * * 1641 69 539 1681 * 1367 708 * * 2863 1514 0 S 70 * * 2644 2547 * * * * * * * 1678 * * * 1488 * * * * 70 253 2638 * 1000 1000 * * 2863 1000 0 D 71 * * 1691 * * * * * * * * 1024 * * * * 2331 * * * 71 0 * * * * * * 2863 0 0 I 72 * * * * * * * 1031 * * * * * * * * * 970 * * 72 0 * * * * * * 2863 0 0 K 73 * * * * * * 2644 * 641 * * * * * 2331 * * * * * 73 0 * * * * * * 2863 0 0 S 74 * * * * * * 2547 * 2644 * * 1678 * * 2331 2665 * * * * 74 271 2547 * 1585 585 * * 2863 1000 0 K 75 * * * 2644 * 2331 * 2719 2665 * * * * 2547 * * 2638 * * * 75 0 * * * * * * 2863 0 0 I 76 * * * * * * * 558 * 2638 * * * * * * * 2644 * * 76 0 * * * * * * 2863 0 0 I 77 * * * * * * * 1091 * * * * * 2331 * * 2638 2547 * * 77 0 * * * * * * 2863 0 0 E 78 * * * 1057 2638 * * * * * * * * * * 1479 * * * * 78 320 * 2331 * * * * 2863 0 0 A 79 1299 * * * * * * 2362 * * * * * * * 2211 2449 * * * 79 0 * * * * * 0 2464 0 1000 L 80 * * * * * * * 2449 * 292 * * * * * * * * * * 80 0 * * * * * 0 2464 0 1000 L 81 * * * 2211 * * * * * 1330 * 2449 * * 2300 * * * * * 81 328 * 2300 * * * 0 2464 0 1000 I 82 * * * * * * * 1970 * * * 1873 * * * 1084 * * * * 82 0 * * * * 0 * 2185 0 1647 D 83 * * 0 * * * * * * * * * * * * * * * * * 83 0 * * * * * * 2863 0 0 S 84 2638 * * * 2719 * * * * * * 2547 * * * 954 * * * * 84 0 * * * * * * 2863 0 0 R 85 * * * * * * 2331 * * * * * * * 642 2638 * * * * 85 320 * 2331 * * * * 2863 0 0 P 86 * * * * * * * * * * * * 0 * * * * * * * 86 0 * * * * 0 * 2464 0 1000 S 87 * * * * * 2331 * * * * * * * * * 320 * * * * 87 0 * * * * * * 2863 0 0 V 88 * * * 2331 * * * 2644 * * * * * * * * * 641 * * 88 0 * * * * * * 2863 0 0 K 89 * * * * * * * 2719 623 * * * * * * 2331 * * * * 89 0 * * * * * * 2863 0 0 L 90 * * * * * * * * * 320 2331 * * * * * * * * * 90 0 * * * * * * 2863 0 0 A 91 0 * * * * * * * * * * * * * * * * * * * 91 0 * * * * * * 2863 0 0 T 92 2644 * * * * * * 2547 * * * * * * * 2719 952 * * * 92 0 * * * * * * 2863 0 0 L 93 * * * * * * * 1050 * 952 * * * * * * * * * * 93 0 * * * * * * 2863 0 0 S 94 2331 * * * * * * * * * * * * * * 642 2638 * * * 94 0 * * * * * * 2863 0 0 F 95 * * * * 2665 * * * * 248 * * * * * * * * * * 95 0 * * * * * * 2863 0 0 I 96 * 2331 * * * * * 1605 * 1082 * * * * * * * * * * 96 0 * * * * * * 2863 0 0 S 97 2638 * * * * * * * * * * * * * * 253 * * * * 97 0 * * * * * * 2863 0 0 L 98 * * * * * * * 2644 * 2665 2547 * * * * 1477 * 2719 * * 98 0 * * * * * * 2863 0 0 I 99 * * * * * * * 642 * * * * * * * * * 1477 * * 99 0 * * * * * * 2863 0 0 A 100 2665 * * * * * * 1082 * * * * * * * * * 1435 * * 100 0 * * * * * * 2863 0 0 E 101 * * 2644 923 * * * * 1678 * * * * * * * * * * * 101 0 * * * * * * 2863 0 0 K 102 * * * * * * * * 666 * 2547 * * * 2331 * * * * * 102 0 * * * * * * 2863 0 0 W 103 * * * * * * * * 2355 2354 * 2318 * * * * * * 1292 * 103 0 * * * * * * 2790 0 0 G 104 2172 * * * * 1369 * * 2355 * * 2354 * * * * * * * * 104 0 * * * * * * 2790 0 0 E 105 * * * 2422 * * * * 2354 * * 2355 * * 2172 * * * * 2318 105 0 * * * * * * 2790 0 0 K 106 * * 2172 2355 * * * 2354 1369 * * * * * * * * * * * 106 0 * * * * * * 2790 0 0 N 107 * * * * * 1243 * * * * * 1388 * 2354 * * * * * * 107 0 * * * * * * 2790 0 0 R 108 * * * * * * 2354 * 2318 * 2172 2355 * * 2422 * * * * * 108 0 * * * * * * 2790 0 0 A 109 2422 * * 2355 * * * * * * * 2318 * * * * 1260 * * * 109 0 * * * * * * 2790 0 0 K 110 * * 2354 * * 2172 * 2318 2422 * * * * * * * * 2355 * * 110 0 * * * * * * 2790 0 0 I 111 2354 * * * * * * 2422 * * * * 2318 * 2172 * * 2355 * * 111 0 * * * * * * 2790 0 0 M 112 1260 * * * * * * * * * 1369 2355 * * * * * * * * 112 0 * * * * * * 2790 0 0 E 113 * * 2355 2422 * * * * * 2172 2354 * * * * 2318 * * * * 113 0 * * * * * * 2790 0 0 I 114 * * 1261 * 1336 * * 2422 * * * * * * * * * * * * 114 314 * 2354 * * * * 2790 0 0 L 115 * * * * * * * * * 0 * * * * * * * * * * 115 0 * * * * * 0 2446 0 1000 S 116 2012 * * * * * * 1984 * * * * * * * 2121 1892 * * * 116 411 2012 * 0 * 0 * 2446 1000 1000 N 117 * * * 1243 * * * * * * * 1388 * * * 2354 * * * * 117 0 * * * * * * 2790 0 0 E 118 * * 1243 792 * * * * * * * * * * * * * * * * 118 0 * * * * * * 2790 0 0 I 119 * * * * * * * 716 * 2355 * * * * * * * 2354 * * 119 0 * * * * * * 2790 0 0 V 120 2318 * * * * * * 1355 * * * * * * * * * 1292 * * 120 0 * * * * * * 2790 0 0 E 121 * * 2354 1292 * * * * * 2318 * 2355 * * * * * * * * 121 0 * * * * * * 2790 0 0 K 122 * * * * * 2354 * * 1369 * * * * * * * 1261 * * * 122 0 * * * * * * 2790 0 0 I 123 * * * * 2355 * * 779 * * * * * * * * * 2172 * * 123 0 * * * * * * 2790 0 0 S 124 * * * * * * * * * * * 2172 * * * 780 * 2354 * * 124 0 * * * * * * 2790 0 0 N 125 2354 * * 2318 * * * * * * * 2422 2172 * * 2355 * * * * 125 0 * * * * * * 2790 0 0 N 126 * * 2172 2354 * * * * * * * 1369 * * * * * * * 2355 126 0 * * * * * * 2790 0 0 G 127 * * * 2354 * 2422 * * * * * * * 2355 * 1243 * * * * 127 0 * * * * * * 2790 0 0 K 128 * * * 1945 * * * * 1034 * * * * 1988 * * * * * * 128 0 * * * * * * 2356 0 0 D 129 * * 419 * * * * * * * * * * 1988 * * * * * * 129 0 * * * * * * 2356 0 0 F 130 * * * * 2037 * * 2032 * 1945 * * * * * * * 1988 * * 130 0 * * * * * * 2356 0 0 I 131 * * * * * * * 0 * * * * * * * * * * * * 131 0 * * * * * * 2356 0 0 D 132 * * 2037 * * 1988 * * * * * 1945 * * * 2032 * * * * 132 0 * * * * * * 2356 0 0 F 133 * * * * 0 * * * * * * * * * * * * * * * 133 0 * * * * * * 2356 0 0 I 134 * * * * * * * 404 * * * * * * * * * 2032 * * 134 0 * * * * * * 2356 0 0 D 135 * * 2037 2032 * * * * * * * 1945 * 1988 * * * * * * 135 0 * * * * * * 2356 0 0 R 136 * * * * * * * * 1112 * * * * * 896 * * * * * 136 0 * * 0 * * * 1606 0 0 //