HHsearch 1.5 NAME c4ue8B_ FAM FILE c4ue8B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ue8B_.a3m DATE Sat Feb 28 08:14:44 2015 LENG 37 match states, 37 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.5468 5.4107 SEQ >ss_dssp CCCCCCCCCHHHHHTTTTSGGGCCCCTTCCGGGSTTC >sa_dssp EEEEEEEDEEDDDEEEEECEEDEEEDEEDDEEEEEEE >ss_pred CCCCEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHCCC >ss_conf 9730011136777532678555588231404653079 >Consensus pxxtkliyerxfmknlrgsplsqtppsnipsclxrgt >c4ue8B_ PHMTKLIYERAFMKNLRGSPLSQTPPSNVPSCLLRGT >UniRef50_B4JBH0(50-86:121) GH10216 n=3 Tax=Drosophila RepID=B4JBH0_DROGR E=3e-12 s/c=1.98 id=84% cov=103% PGGTKLIYERNFMKNLRGSPLSQTPPSNIPSCLMRGT # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 1098 0 0 H 2 * * * * * 1000 1000 * * * * * * * * * * * * * 2 0 * * * * * * 1098 0 0 M 3 * * * * * 1000 * * * * 1000 * * * * * * * * * 3 0 * * * * * * 1098 0 0 T 4 * * * * * * * * * * * * * * * * 0 * * * 4 0 * * * * * * 1098 0 0 K 5 * * * * * * * * 0 * * * * * * * * * * * 5 0 * * * * * * 1098 0 0 L 6 * * * * * * * * * 0 * * * * * * * * * * 6 0 * * * * * * 1098 0 0 I 7 * * * * * * * 0 * * * * * * * * * * * * 7 0 * * * * * * 1098 0 0 Y 8 * * * * * * * * * * * * * * * * * * * 0 8 0 * * * * * * 1098 0 0 E 9 * * * 0 * * * * * * * * * * * * * * * * 9 0 * * * * * * 1098 0 0 R 10 * * * * * * * * * * * * * * 0 * * * * * 10 0 * * * * * * 1098 0 0 A 11 1000 * * * * * * * * * * 1000 * * * * * * * * 11 0 * * * * * * 1098 0 0 F 12 * * * * 0 * * * * * * * * * * * * * * * 12 0 * * * * * * 1098 0 0 M 13 * * * * * * * * * * 0 * * * * * * * * * 13 0 * * * * * * 1098 0 0 K 14 * * * * * * * * 0 * * * * * * * * * * * 14 0 * * * * * * 1098 0 0 N 15 * * * * * * * * * * * 0 * * * * * * * * 15 0 * * * * * * 1098 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 1098 0 0 R 17 * * * * * * * * * * * * * * 0 * * * * * 17 0 * * * * * * 1098 0 0 G 18 * * * * * 0 * * * * * * * * * * * * * * 18 0 * * * * * * 1098 0 0 S 19 * * * * * * * * * * * * * * * 0 * * * * 19 0 * * * * * * 1098 0 0 P 20 * * * * * * * * * * * * 0 * * * * * * * 20 0 * * * * * * 1098 0 0 L 21 * * * * * * * * * 0 * * * * * * * * * * 21 0 * * * * * * 1098 0 0 S 22 * * * * * * * * * * * * * * * 0 * * * * 22 0 * * * * * * 1098 0 0 Q 23 * * * * * * * * * * * * * 0 * * * * * * 23 0 * * * * * * 1098 0 0 T 24 * * * * * * * * * * * * * * * * 0 * * * 24 0 * * * * * * 1098 0 0 P 25 * * * * * * * * * * * * 0 * * * * * * * 25 0 * * * * * * 1098 0 0 P 26 * * * * * * * * * * * * 0 * * * * * * * 26 0 * * * * * * 1098 0 0 S 27 * * * * * * * * * * * * * * * 0 * * * * 27 0 * * * * * * 1098 0 0 N 28 * * * * * * * * * * * 0 * * * * * * * * 28 0 * * * * * * 1098 0 0 V 29 * * * * * * * 1000 * * * * * * * * * 1000 * * 29 0 * * * * * * 1098 0 0 P 30 * * * * * * * * * * * * 0 * * * * * * * 30 0 * * * * * * 1098 0 0 S 31 * * * * * * * * * * * * * * * 0 * * * * 31 0 * * * * * * 1098 0 0 C 32 * 0 * * * * * * * * * * * * * * * * * * 32 0 * * * * * * 1098 0 0 L 33 * * * * * * * * * 0 * * * * * * * * * * 33 0 * * * * * * 1098 0 0 L 34 * * * * * * * * * 1000 1000 * * * * * * * * * 34 0 * * * * * * 1098 0 0 R 35 * * * * * * * * * * * * * * 0 * * * * * 35 0 * * * * * * 1098 0 0 G 36 * * * * * 0 * * * * * * * * * * * * * * 36 0 * * * * * * 1098 0 0 T 37 * * * * * * * * * * * * * * * * 0 * * * 37 0 * * 0 * * * 1098 0 0 //