HHsearch 1.5
NAME  c4u3fV_
FAM   
FILE  c4u3fV_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c4u3fV_.a3m 
DATE  Sat Aug  1 08:17:28 2015
LENG  41 match states, 41 columns in multiple alignment
FILT  1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  0.7 
EVD   0.5858  5.3653 
SEQ
>ss_dssp
CCCCCCCCCCCCCCSTTTTCSCSCSSCCCBCCBTTBCCCBC
>sa_dssp
EDDDDEDDEEEEDEDEEEDEEEEDDEEEEECEDEECDEEED
>ss_pred
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCEECCCCCCCC
>ss_conf
96421222346302101114403333443020027864359
>Consensus
xxxxxxxxxxxpllcresmsgrsarrdlvagislnapasvr
>c4u3fV_
XXXXXXXXXXXPLLCRESMSGRSARRDLVAGISLNAPASVR
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
X 1    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	1
       *	*	*	*	*	*	*	0	0	0	

X 2    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	2
       *	*	*	*	*	*	*	0	0	0	

X 3    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	3
       *	*	*	*	*	*	*	0	0	0	

X 4    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	4
       *	*	*	*	*	*	*	0	0	0	

X 5    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	5
       *	*	*	*	*	*	*	0	0	0	

X 6    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	6
       *	*	*	*	*	*	*	0	0	0	

X 7    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	7
       *	*	*	*	*	*	*	0	0	0	

X 8    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	8
       *	*	*	*	*	*	*	0	0	0	

X 9    3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	9
       *	*	*	*	*	*	*	0	0	0	

X 10   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	10
       *	*	*	*	*	*	*	0	0	0	

X 11   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	11
       *	*	*	*	*	*	*	0	0	0	

P 12   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1000	0	0	

L 13   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1000	0	0	

L 14   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1000	0	0	

C 15   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1000	0	0	

R 16   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	16
       0	*	*	*	*	*	*	1000	0	0	

E 17   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1000	0	0	

S 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	18
       0	*	*	*	*	*	*	1000	0	0	

M 19   *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1000	0	0	

S 20   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	20
       0	*	*	*	*	*	*	1000	0	0	

G 21   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1000	0	0	

R 22   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	22
       0	*	*	*	*	*	*	1000	0	0	

S 23   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	23
       0	*	*	*	*	*	*	1000	0	0	

A 24   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1000	0	0	

R 25   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	25
       0	*	*	*	*	*	*	1000	0	0	

R 26   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	26
       0	*	*	*	*	*	*	1000	0	0	

D 27   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1000	0	0	

L 28   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1000	0	0	

V 29   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	29
       0	*	*	*	*	*	*	1000	0	0	

A 30   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	30
       0	*	*	*	*	*	*	1000	0	0	

G 31   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	31
       0	*	*	*	*	*	*	1000	0	0	

I 32   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	32
       0	*	*	*	*	*	*	1000	0	0	

S 33   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	33
       0	*	*	*	*	*	*	1000	0	0	

L 34   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	34
       0	*	*	*	*	*	*	1000	0	0	

N 35   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	35
       0	*	*	*	*	*	*	1000	0	0	

A 36   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	36
       0	*	*	*	*	*	*	1000	0	0	

P 37   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	37
       0	*	*	*	*	*	*	1000	0	0	

A 38   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	38
       0	*	*	*	*	*	*	1000	0	0	

S 39   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	39
       0	*	*	*	*	*	*	1000	0	0	

V 40   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	40
       0	*	*	*	*	*	*	1000	0	0	

R 41   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	41
       0	*	*	0	*	*	*	1000	0	0	

//