HHsearch 1.5 NAME c4u1eG_ FAM FILE c4u1eG_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4u1eG_.a3m DATE Sat Sep 13 08:15:13 2014 LENG 89 match states, 89 columns in multiple alignment FILT 34 out of 38 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.4544 0.9725 SEQ >ss_dssp CCEECSSSCEEEEEEEEETTEEEEEEEEECCCCCSCCCCHHHHHHHTCCCCGGGTTCCSSCCTTSCSSCCCCCCCCCTTHHHHHHHHHC >sa_dssp EECECEEEADBDCDEEEEEEDEEEDDEEEDEEEDEEEDEEDDDDDDEEEDEEECEECEEDDCEEDEEEEEEEEEEEDEDEEDCCEEDEE >ss_pred CCCCCCCCCEEEEEEEECCCEEEEEEEEEEEEEEEEECCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHCC >ss_conf 95007986499999995398299999999999999962786862356410111016888886003021363899982488645576429 >Consensus xixxxxdGxKtvieykxxdGkkvKvtkxxkxxxxxxkVxkxVaeRKxWxKFGxxxxxxpGpxxxTTxxxEeixlxxxxxxxxxeeekxx >c4u1eG_ EIIENADGSRSIITYKIEDGVKYKITQKVKEVKVLEKVHKSVAERKNWHKYGSEKGSPAGPSAVTARLGEEVELRLSRNWKQAEEERIQ >UniRef50_B3RPB6(66-148:296) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPB6_TRIAD E=9e-09 s/c=0.74 id=30% cov=94% EILDN--GIKIVEEERTEGNRKFLVKRTFR--IENKRVPKPVAERKAWKKFGASTEDPKGPSSSTTKVAEDTFLAFITNREDNSDEK-- >UniRef50_A4RZD3(20-105:264) Predicted protein (Fragment) n=4 Tax=Viridiplantae RepID=A4RZD3_OSTLU E=9e-19 s/c=1.10 id=33% cov=97% ----DAEGVWTSITYQLNEaGMRTRTVKKYKEHEVTKKVTPGMLERKTWEKFGDAKRYKPGDESMTAVSLEEIFLEKTRAQPKSELEKAE >UniRef50_A8HW92(23-111:280) Eukaryotic translation initiation factor (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8HW92_CHLRE E=2e-14 s/c=0.90 id=31% cov=97% -VTKGPDdnGIKTVIEyYKNEKGDALKKTTKIKVVTVEKKVYKVSEERRNWPRFGGAAKETP-QDSVTVQGIDEIPFERVRQIKATTQEK-- >UniRef50_A9UUD7(44-127:281) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UUD7_MONBE E=2e-17 s/c=1.07 id=35% cov=91% ------DNTKRVTEYhRDEEGQLVKKTTTYRVESRTTKASKAVIARRKWTKFGAAKGAAPGPEAVTTSVGEEVYLILKTHKQKAEPQ--- >UniRef50_C4R7W0(17-95:288) Subunit of the core complex of translation initiation factor 3(EIF3) n=1 Tax=Pichia pastoris GS115 RepID=C4R7W0_PICPG E=5e-17 s/c=1.13 id=31% cov=88% QVTDNGDGTKTVVSFtRNQQGKKVKITKRIRETIVKEEVVPAVAQRRKWSRFGEEKDNTAvGPDTRTTMLDDPIDVQFG------------ >UniRef50_C1M0R2(27-107:890) Eukaryotictranslation initiation factor, putative n=1 Tax=Schistosoma mansoni RepID=C1M0R2_SCHMA E=6e-19 s/c=1.17 id=27% cov=89% ---------KTVVRYfYNEDGDLIKETKEYQ--KEKRVVASQVADRKKWRKFGASKSDPSGGNLANTYPADVVTMQIVQSRQPEQEQKKQ >UniRef50_Q5K9M4(27-101:290) Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Filobasidiella neoformans RepID=EIF3G_CRYNE E=1e-11 s/c=0.94 id=34% cov=83% ---TDANGITTIVSWKYNaDDQKVKVTRRVRRRLQVSTVTQTMAERKQWPKFGLDKGKPPGPDRKTTIIGENLHFKI------------- >UniRef50_B6AF76(34-113:324) RNA recognition motif. family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AF76_9CRYT E=1e-10 s/c=0.85 id=32% cov=81% ----DKDGIKHVISYiKDSKGATVKITKKVREIRNIRKINMNIVRRRQImeEKLGKKYNS----DMEMPKLGDEISIELSKN---------- >UniRef50_Q54WM4(21-89:233) Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Dictyostelium discoideum RepID=EIF3G_DICDI E=4e-10 s/c=0.95 id=29% cov=79% ---------------KNDKGEEVKVIKRYQEYQITVKRNRKVDERKKWKKFGECDNKT---GLENTAYGDEQFLVLTRGAEVKEEEK-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 3459 1412 * * * * * * * * * 907 * * * * * * 1 0 * * * * * * 2632 0 0 I 2 * * * * * * * 717 * * * * * * * * 3755 1656 * * 2 0 * * * * * * 3248 0 0 I 3 * * * * 3755 * * 2347 * 2672 * * * 2906 * 3127 1623 * * * 3 0 * * * * * * 3248 0 0 E 4 * * 1895 2169 * * * * 3483 * * * 3400 3028 * * 2307 * * * 4 0 * * * * * * 3382 0 0 N 5 4136 * 1498 4470 * 2657 * * * * * 1376 * * * * * * * * 5 103 * 3864 * * * * 3691 0 0 A 6 1111 * * * * 3223 * * 2713 * * * 2310 3721 * * * * * * 6 0 * * * * * 0 3582 0 1000 D 7 * * 738 3126 * * * * * * * 1806 * * * * * * * * 7 77 4275 * 1000 1000 0 * 3819 1000 1000 G 8 * * * * * 69 * * * * * 4426 * * * * * * * * 8 0 * * * * * * 3940 0 0 S 9 * * * * * * 4580 1841 * * * * * * * 4984 1381 1925 * * 9 0 * * * * * * 3940 0 0 R 10 * * * * * * * * 311 * * * * * 3108 * 4647 * 4709 * 10 0 * * * * * * 4183 0 0 S 11 * * * * * * 3213 4438 3466 * * * * 4916 5116 5370 727 5410 * 4579 11 0 * * * * * * 4183 0 0 I 12 * * * 4090 * * * 2178 * 3489 5214 * * * * 4709 * 902 * 5017 12 0 * * * * * * 4183 0 0 I 13 * * * 4438 * * * 1309 * * * * * * * * 2045 1700 * * 13 0 * * * * * * 4183 0 0 T 14 4090 * 5017 1182 * * * * * * * * * 5460 4452 2427 2215 * * * 14 60 4606 * 0 * * * 4183 1000 0 Y 15 * * * 3580 2796 * 4591 * * * * * * * * * * * 3775 604 15 364 2164 * 0 * * * 4183 2626 0 K 16 * * * * * * * * 1081 * * * * 3552 1683 * 4139 4881 * 4650 16 205 2917 * 0 * * * 4253 2247 0 I 17 * * 3461 4139 3489 * * 2833 * 4746 4633 1812 * * * * 3124 3544 * 4055 17 117 3677 * 0 * * * 4253 1979 0 E 18 * * 2690 1435 * * * * 4778 4380 * 2223 * 4144 * 3985 * 4139 * * 18 125 3594 * 0 * * * 4253 1766 0 D 19 * * 1031 2432 * 3680 * * 2802 * * 5413 * 4952 4380 * * * * * 19 246 2674 * 0 * * * 4253 2472 0 G 20 * * 2973 * * 332 * * * * * 3680 * * * * * * * * 20 0 * * * * * * 4253 0 0 V 21 4443 * 3165 3024 * * * * 1170 5063 4746 * * 3916 4504 5864 * 3636 * * 21 0 * * * * * * 4253 0 0 K 22 4669 * * 4610 * * * * 828 3889 * * * * 2492 * 3169 * * * 22 0 * * * * * * 4253 0 0 Y 23 * * * * 3942 * * 3061 * 3174 * * * * * * 4086 1027 4139 3352 23 0 * * * * * * 4253 0 0 K 24 * * * * * * * * 271 4504 * * * * 2976 * * * * * 24 0 * * * * * * 4253 0 0 I 25 * * * 4650 * * * 1758 3900 * * * * * 4633 * 3896 1029 * * 25 44 * 5048 * * * * 4253 0 0 T 26 * * * * * * * 4567 4492 * * * * * * 3730 737 2071 * * 26 42 * 5120 * * * 0 4230 0 1000 Q 27 * * * * * * * * 1415 * * * * 3163 1622 * 2769 4580 * * 27 0 * * * * 979 1021 4213 0 1510 K 28 * * * 4603 * * * * 1534 * * 4861 * 4747 2077 4611 2219 4350 * * 28 0 * * * * 0 * 4230 0 1000 V 29 * * * * 2441 * * 2010 * * * * * * * * 4711 1687 * 2192 29 33 * 5473 * * * * 4253 0 0 K 30 * * * * * * * * 1026 * * * * 3613 1465 * 5021 * * 4869 30 427 * 1964 * * * 0 4254 0 1000 E 31 * * * 1413 * * * * 3584 * * 4329 * 4656 3528 4461 3653 2059 * * 31 0 * * * * 2925 204 3915 0 2584 V 32 * * * 4657 4669 * 3497 2061 * 4818 * * * 4338 4225 4976 2822 2150 * 4159 32 59 * 4647 * * 0 * 4007 0 2505 K 33 * * * 3940 * * * 2226 2582 3561 * 4846 * 4591 3159 3860 3275 3199 * * 33 0 * * * * * 0 4249 0 1000 V 34 * * * 1817 * * * 3892 4363 * * 3980 * 3689 5141 5506 5181 1390 * * 34 0 * * * * 0 * 4249 0 1000 L 35 * 4408 * 4680 * * * 3433 2415 3584 * 3837 * 4783 3907 * 1703 3828 * * 35 39 * 5222 * * * * 4254 0 0 E 36 * * * 1942 * * * 5842 1970 5119 * 4987 * 3109 2651 4676 4289 4593 * * 36 0 * * * * 0 * 4237 0 1000 K 37 4728 * * 4973 * * 5550 4122 911 * * * * * 2175 * 4702 4061 * * 37 44 5057 * 0 * * * 4254 1000 0 V 38 4382 * * * * * * 2820 * 4728 * 4783 * * 4623 * 5178 582 * * 38 0 * * * * * * 4254 0 0 H 39 4240 * 4918 * * * 4399 4783 * 4641 * 2206 2843 5318 * 2353 2811 4973 * 4680 39 0 * * * * * * 4254 0 0 K 40 * * * * * * 4410 * 1156 * 4461 4641 2232 4702 3646 4691 4356 * * * 40 0 * * * * * * 4254 0 0 S 41 2382 4641 4408 4788 * 4764 * 4783 4623 5388 * 3999 4516 3354 4966 3021 4069 2961 * * 41 0 * * * * * * 4254 0 0 V 42 3842 * * * * * * 2918 * * 3255 * * * * 4680 * 612 * * 42 0 * * * * * * 4254 0 0 A 43 719 * 3763 3731 * * * 5185 * 3861 * * * * * * * 3318 * 4408 43 0 * * * * * * 4254 0 0 E 44 2866 * 3395 1196 * * 5178 * 3018 * * 5866 * 4165 3573 5428 * * * * 44 0 * * * * * * 4254 0 0 R 45 * * * * * * * * * * * * * * 0 * * * * * 45 0 * * * * * * 4254 0 0 K 46 * * * * * * * * 678 * * * * * 1578 4641 * * * * 46 0 * * * * * * 4254 0 0 N 47 4508 * * * * * 5400 * 1338 4564 * 2371 * 3486 * 4060 2718 * * * 47 0 * * * * * * 4249 0 0 W 48 * * * * * * * 3340 * 5159 * * * * * * * * 196 * 48 75 4309 * 1000 1000 * * 4249 1000 0 H 49 2820 * * 3513 * * 5391 * 1822 * * 4706 3674 * 4677 4220 2934 3014 * * 49 0 * * * * * * 4249 0 0 K 50 * * * * * * * * 185 * * * 4371 * 3799 * * * * * 50 0 * * * * * * 4249 0 0 Y 51 * * * * 273 * * * * 4309 * * * * * * * * * 3039 51 0 * * * * * * 4249 0 0 G 52 * * * * * 0 * * * * * * * * * * * * * * 52 148 3358 * 0 * * * 4249 1812 0 S 53 2202 * 1949 3399 * 4660 * * 2572 4048 * 5595 * 4084 * 3627 * * * * 53 0 * * * * * * 4249 0 0 E 54 1784 3347 4688 2018 * * * * 4309 * * * * 4344 * 2146 * * * * 54 0 * * * * * * 4249 0 0 K 55 2262 * 4603 5595 * 4772 * * 1401 3782 * * * 5062 3482 5159 4508 * * 4309 55 0 * * * * * * 4249 0 0 G 56 * * 2623 4508 5595 1958 3998 * 4660 5772 * 2236 * 4097 3898 4121 * * * * 56 0 * * * * * * 4249 0 0 S 57 3252 * 1953 2889 * 4371 * * 2971 * * 3277 * * * 2684 * * * 3898 57 75 * 4309 * * * * 4249 0 0 P 58 3321 * 4151 4618 * 3802 * * 2776 5120 5447 5261 1464 * * 5259 3071 * * * 58 66 * 4486 * * * 0 4146 0 1000 A 59 2773 * 4837 * * * 4232 * 4411 4689 * * 912 * * 2755 * * * * 59 118 4846 4516 0 * * 0 4064 1000 1611 G 60 * * * * * 229 * * * 4605 * * * * * 3239 * * * * 60 64 * 4528 * * 1449 658 4007 0 2101 P 61 * * 3737 * * 4328 * * * 3981 * * 517 4456 * 4703 * 5109 * * 61 0 * * * * 0 * 4003 0 2094 S 62 * * 1643 3393 * 3747 5483 * * * * 1973 * 4130 * 2506 * * * * 62 0 * * * * * * 4249 0 0 A 63 2995 * * * 5530 * 4344 * 6128 3639 4309 * * * 3224 1983 4143 2768 * 3391 63 103 * 3857 * * * * 4249 0 0 V 64 2480 * 4050 3413 * * * * 4530 4577 3102 * * 4590 4006 2722 3858 3341 * 4584 64 0 * * * * 978 1022 4227 0 1522 T 65 * * * * * * * * * * 4280 3613 * * * * 206 * * * 65 0 * * * * 0 * 4213 0 1000 A 66 3459 * * * * * * * * * 4706 * 4309 * * * 515 3508 * 4946 66 0 * * * * * * 4249 0 0 R 67 4603 * * * 4344 * * 3904 2894 * 3258 4392 * 3514 3179 3164 3586 3898 * 3378 67 0 * * * * * * 4249 0 0 L 68 5765 * * * * 4660 * 2950 * 2694 * * 3254 * * 2702 * 1480 * 4603 68 0 * * * * * * 4249 0 0 G 69 2472 6128 4952 * * 1124 3630 3847 * 4750 * * * * * 3499 4706 * * * 69 0 * * * * * * 4249 0 0 E 70 * * 1849 469 * * * * * * * * * * * * * * * * 70 0 * * * * * * 4249 0 0 E 71 * * 1847 1157 * * * * 5364 * * 2822 3859 * * * * 4677 * * 71 0 * * * * * * 4249 0 0 V 72 * * * * * * * 1138 * 4000 * * * 4603 * * 4508 1329 * * 72 0 * * * * * * 4249 0 0 E 73 * * 3137 5391 2435 * 3729 3211 * 3970 * * 4660 4232 * 3813 3254 3569 * 3693 73 0 * * * * * * 4249 0 0 L 74 * * * * 2250 * * 3340 * 1204 2153 * * * * * * 4952 * * 74 0 * * * * * * 4249 0 0 R 75 4305 * * 2032 * * * 3541 3269 * * * * 2136 3116 4128 5250 3491 * * 75 0 * * * * * * 4161 0 0 L 76 * * * * 1660 * * 3447 4503 1531 5135 * 5061 * 3596 * * 4042 * * 76 39 5224 * 1000 1000 * * 4161 1000 0 S 77 * * * * * 2713 * 3558 4700 * * * 3935 4811 * 2109 2007 3288 * 4639 77 0 * * * * * * 4128 0 0 R 78 4803 * * * * * * * 2861 3000 * * * 4210 1459 5476 2160 4735 * * 78 0 * * * * * * 4102 0 0 N 79 3457 * 4851 * * 3019 4669 * 4287 * * 1383 * 4185 * 2172 * * * * 79 0 * * * * * * 4102 0 0 W 80 4074 * * * 4581 * * 4018 2465 * * 4584 * 4138 3001 2884 4413 * 1999 * 80 0 * * * * * * 4004 0 0 K 81 * * 3345 1903 * * * * 1647 * * * 3206 3157 4336 * 4473 * * * 81 106 3819 * 1000 1000 * * 4046 1594 0 Q 82 3214 * 2952 2992 * * * * 2694 * * * 3923 1904 * * 3511 4013 * * 82 76 4278 * 2000 415 * * 4046 1000 0 A 83 2092 * * 2993 * * * * 3753 3240 3530 3909 * * * 3056 2423 * * * 83 0 * * * * * * 3938 0 0 E 84 * * 3449 1108 * * 4035 * 4234 * * * * 3692 * 3806 2461 * * * 84 0 * * * * * * 3903 0 0 E 85 4260 * 3806 843 * * * * * 3944 * * 3142 3580 * 4129 * * * * 85 0 * * * * * * 3903 0 0 E 86 * * 2674 658 * * * * * * * * * 2782 * * 3959 * * * 86 0 * * * * * * 3832 0 0 R 87 * * * 3788 * * * * 361 * * * * 3668 3827 * * * * * 87 0 * * * * * * 3608 0 0 I 88 1299 * * * * * * 2461 2226 2335 * * * * * * * * * * 88 0 * * * * * * 2587 0 0 Q 89 * * 2335 2129 * * * * * * * * * 803 * * * * * * 89 0 * * 0 * * * 2587 0 0 //