HHsearch 1.5 NAME c4rgiA_ FAM FILE c4rgiA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4rgiA_.a3m DATE Sat Jan 3 08:12:57 2015 LENG 71 match states, 71 columns in multiple alignment FILT 83 out of 87 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4641 2.0648 SEQ >ss_dssp CCCCEECCCSSEEEEEEETTTTEEEEEETTTEEEEEESCCHHHHHHHHHCSCHHHHHHHHTTTTSCEEEEC >sa_dssp ECEDDECEBEDADBAABBDEEDBABACBEEECBCBBCEADDEBCDDACECEDBBECBDDDADEECEDDEDE >ss_pred CCEEEEEECCCEEEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHCCCCCCCEECC >ss_conf 96345310021545540832287999981897898708898999875248752225564137756517676 >Consensus xxxrxxVxSsxixsigYDxxxxxLxIxFxxGxxYxYxxVPxxvyxxlxxAxSxGxyfxxxIkxxyxyxkvg >c4rgiA_ AXQRQPVSSSRILSIGYDPDNRXLEIQFREQGTYQYLGVPERAHQNFXSAVSKGRFFDGVIKGKFLCRKIG >UniRef50_C0Z6B2(24-81:87) Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6B2_BREBN E=5e-05 s/c=0.84 id=26% cov=82% --------SKLIKAARYDLATSHLYIRFHDGRELVYCRVTPYAYNAFLNADSFSDHFHSFISQRY------ >UniRef50_A3VKK0(32-87:96) Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VKK0_9RHOB E=0.0002 s/c=0.83 id=26% cov=80% -------QSSFVHRICFNGDEAHV-VVLLNSTYYAYCNVDAATVRNWLNSSSKGRFYNANIKNS------- >UniRef50_Q6FCU9(27-86:89) Putative uncharacterized protein n=14 Tax=Acinetobacter RepID=Q6FCU9_ACIAD E=2e-06 s/c=0.89 id=26% cov=75% ----------SVKSWKYDANTRHLKIFYENGTGDLYHPVPLFIYDNLLRAHDKAAFVHKYIE--------- >UniRef50_UPI00016C37E8(9-79:80) hypothetical protein GobsU_07507 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C37E8 E=7e-10 s/c=0.92 id=27% cov=94% ----TAVSSSNVSAVGYDTAFKRLWVKFKSGDVYAYESVPSHVYLDMLRAASVGSYLWRVVRANgtdslYAYAKV- >UniRef50_Q21VN2(45-104:129) Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VN2_RHOFD E=1e-08 s/c=1.01 id=21% cov=86% ------FTSGRIKKADYNTASRQLDLHWDNKTVLAYKHVPEEVYRRLCSAPNPAAYWEDRIAEEYP----- >UniRef50_A1K8E7(2-69:85) Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8E7_AZOSB E=4e-11 s/c=1.01 id=19% cov=97% --EMKRISAGKLRAIGYDARQRVLRVELDDGSAIEYAAVGEEVWRRLSGSGSAWSYYRDNIEEEFAGKRV- >UniRef50_A0ZYR3(554-625:651) Putative uncharacterized protein n=1 Tax=Archaeal BJ1 virus RepID=A0ZYR3_9CAUD E=6e-10 s/c=0.91 id=23% cov=97% --EQMQFSSSNLDEGLYDFGENELYLSFLrdegQSSLYAYVDVPASEWSALANAGSHGGYHYDNIRLEYPYLEI- >UniRef50_Q11QF2(96-156:164) Chaperone with DnaK; heat shock protein n=4 Tax=Bacteroidetes RepID=Q11QF2_CYTH3 E=3e-08 s/c=0.98 id=26% cov=86% ---------TNASMIDYQYKARVLEVKYSDGAVYEFFDVPSNIYNKLLNSDVPGRFVRRNIcGGEFVYRK-- >UniRef50_Q1MMX1(65-128:132) Putative uncharacterized protein n=9 Tax=Rhizobium/Agrobacterium group RepID=Q1MMX1_RHIL3 E=1e-07 s/c=0.90 id=23% cov=86% ------VKSKIIKTVYFSQEDGRLRICFKNGEERLFEGVPSSEAHAMTVAPSPGHYYLDRIRTRFR----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 X 2 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 2 * * * * * * * 1000 0 0 Q 3 * * * 1409 * * 4798 * 1959 * * * * 2060 3467 * * * * * 3 0 * * * * * * 3976 0 0 R 4 * * * * * * * * * * 3112 * * 2682 457 * * * * * 4 0 * * * * * * 4078 0 0 Q 5 * * * 3010 * * 2107 4776 3541 4097 4392 * * 2403 4931 5666 3066 4203 * * 5 0 * * * * * * 4503 0 0 P 6 2893 * 4698 * * 5392 5169 * 5816 4652 * 5852 1061 4343 3490 4513 5612 * * 5742 6 0 * * * * * * 4730 0 0 V 7 * 5141 * * 3374 * * 3454 * 4742 * * * * * 5584 * 462 * * 7 0 * * * * * * 5041 0 0 S 8 4980 * 4093 2302 * * * 5007 3802 * 5524 5625 * 3462 5378 1853 3231 4747 * 5228 8 0 * * * * * * 5156 0 0 S 9 5820 * * * * 6034 * * 5582 * * * * * 5634 143 5597 * * * 9 27 5759 * 0 * * * 5392 1000 0 S 10 5652 6217 * 5712 * 3363 * * 3335 6355 * 4813 * * 6728 891 2822 6207 * * 10 0 * * * * * * 5419 0 0 R 11 3074 * * 6436 5016 * 4958 4422 5008 4201 4547 2173 * 3085 4212 3053 4006 4175 * * 11 0 * * * * * * 5453 0 0 I 12 5075 * * * 3736 * * 1024 * 2547 6231 * * * * * * 2189 * * 12 0 * * * * * * 5453 0 0 L 13 3039 * 4471 4957 5693 * 3203 6575 2438 5527 * 4679 * 3810 2531 3787 4382 4978 * 5572 13 29 * 5671 * * * * 5453 0 0 S 14 1560 * 5130 4463 * 6405 4626 * 4442 * 5677 4987 * * 4164 1524 4869 * * * 14 0 * * * * * 0 5417 0 1000 I 15 2874 * * * 4812 5095 * 1501 * 6261 5468 * * * * 5538 5415 1636 5856 5271 15 0 * * * * 0 * 5417 0 1000 G 16 6484 5048 3773 4902 6553 622 6550 5454 5871 5129 * * * 6655 4256 6045 * 6051 * 5645 16 60 4997 6702 1117 891 * * 5453 1668 0 Y 17 * * * * 3229 * 4334 * * * * * * * * * * * 6293 267 17 0 * * * * * 0 5451 0 1000 D 18 * * 524 4139 6377 6538 4915 * 5428 * * 3257 * 5709 * 4483 * * * * 18 0 * * * * 0 * 5451 0 1000 P 19 2379 * 6301 3435 4921 5923 5904 * 6415 5856 * * 1760 3961 4305 4397 3855 5366 4733 5711 19 0 * * * * * * 5450 0 0 D 20 2430 * 2795 2245 6192 5438 6252 4248 3643 5140 * 3942 6522 6555 4545 5807 3304 * * * 20 0 * * * * * * 5450 0 0 N 21 4584 4543 4476 4019 6259 6068 6078 * 4391 4755 * 3119 * 3440 5116 3066 1618 * * * 21 18 * 6309 * * * * 5466 0 0 R 22 4896 * * 3670 * 4066 5387 * 2819 5276 5214 3976 * 2078 2369 3110 * * * * 22 0 * * * * * 0 5470 0 1000 X 23 6076 * 5120 3904 * * 3912 2134 5285 4701 * 5427 * 4678 4055 5281 2090 2754 * * 23 0 * * * * 0 * 5473 0 1000 L 24 * * * * * * * * * 148 3932 * * * * * * 4959 * * 24 24 * 5951 * * * * 5479 0 0 E 25 3538 * 4430 1896 5371 6082 * 4564 3976 4676 * * * 4859 2958 4941 3753 4973 5414 3477 25 0 * * * * 0 * 5450 0 1000 I 26 * * * * 6149 * * 1213 * 2796 * * * * * * * 1284 * * 26 0 * * * * * * 5479 0 0 Q 27 4637 5680 5788 1820 5933 6954 5491 4316 3888 * * 5913 * 3063 2844 5316 4116 3850 4956 6085 27 0 * * * * * * 5479 0 0 F 28 * 6147 * * 505 * 5829 6245 * 3564 * * * * * * * * 5491 2799 28 46 5789 6245 0 * * * 5479 1613 0 R 29 4965 6278 3902 4953 * * 3067 * 2442 2850 * 4764 * 3967 3805 3349 4060 3582 * * 29 65 4499 * 1434 667 0 * 5469 2366 1000 E 30 * * 2256 6681 * 4835 5348 5014 5470 * * 1649 * 5307 5828 1760 6542 * * * 30 110 3765 * 2599 260 * * 5479 2188 0 Q 31 6147 * 6083 * * 371 * * 4423 * * 5675 6573 6681 5746 4373 4490 * * * 31 56 * 4724 * * * * 5479 0 0 G 32 3162 * 5549 4189 * 2713 6143 * 3948 6204 5825 6645 * 6015 3246 1749 3048 * * * 32 0 * * * * 0 * 5586 0 1839 T 33 4125 4353 6454 4423 * 4595 * 2690 * 3392 5026 * 6540 5837 3770 6573 3496 1819 * 5091 33 33 5485 * 0 * * * 5479 1628 0 Y 34 * * 5073 5550 5169 * * 6203 * 4015 * * * * 4168 * * * * 340 34 0 * * * * * * 5608 0 0 Q 35 3310 * 3423 2785 * * 3054 5351 * 3943 * * * 2687 2486 6050 4279 4308 * * 35 0 * * * * * * 5608 0 0 Y 36 * * * * 3559 * * * * * * * * * * * * * 5560 162 36 0 * * * * * * 5608 0 0 L 37 4370 3876 4826 3640 2423 6050 4887 5445 3415 2725 * * 5705 6545 4872 4128 6059 4407 * 3620 37 0 * * * * * * 5608 0 0 G 38 3632 * 2956 3639 6064 1769 5474 * 5437 5819 * 2165 5914 5089 5117 4611 * * * * 38 0 * * * * * * 5608 0 0 V 39 5242 * * * 4196 * * 4586 * * * * * * * * * 189 * * 39 0 * * * * * * 5608 0 0 P 40 4308 * 4355 5705 * 5382 * * * * * 5433 534 5954 * 3889 4054 * * * 40 0 * * * * * * 5608 0 0 E 41 2677 * * 2249 5306 6592 * 5208 3793 3960 * 6271 2689 3364 4737 3402 5560 6870 7133 * 41 0 * * * * * * 5608 0 0 R 42 3579 * 3386 2229 4329 5093 4633 * 4006 * 6531 3566 5623 3924 3749 3355 5033 6588 * 5005 42 0 * * * * * * 5608 0 0 A 43 4475 * 4866 3699 * * 6709 1973 6583 3864 * 5677 * 6030 * * 3051 1536 * * 43 0 * * * * * * 5608 0 0 H 44 3958 * * * 2492 * 3829 * 6473 * * * * * * * * 3871 2729 1129 44 0 * * * * * * 5608 0 0 Q 45 3474 * 3055 2373 * 5972 5676 4570 5372 5020 * 3963 * 2524 3139 4897 5522 4569 * 6050 45 0 * * * * * * 5608 0 0 N 46 2187 * 3374 2800 * 2664 * 5707 3473 6545 * 3321 * * 3931 4081 4726 * * * 46 0 * * * * * * 5608 0 0 F 47 * * * * 1594 * * 5707 * 1003 3278 * * * * * * 6778 4701 * 47 23 5972 * 0 * * * 5608 1000 0 X 48 5589 4160 5584 * * 5617 6622 3529 3258 1621 3261 * * 6854 3978 4366 4306 3890 * 6298 48 13 * 6772 * * * * 5611 0 0 S 49 3186 * 5441 5343 * 4369 4000 * 3993 6525 4784 2535 * 4762 4222 2279 3389 4490 * 6295 49 15 6607 * 1000 1000 0 * 5609 1000 1000 A 50 452 * * * * * * * * * * * 6030 * * 2445 4950 5171 * 6635 50 0 * * * * * * 5608 0 0 V 51 5588 * 2386 2718 6587 2835 4985 * 5707 5701 * 4959 2712 6249 5797 3068 4821 5135 * 5928 51 28 5707 * 2807 222 * * 5608 1000 0 S 52 4828 * 4726 4868 * * * * 6330 * * 4683 * * * 281 * 5770 * * 52 0 * * * * * * 5608 0 0 K 53 3966 * * * 5889 * 3811 2964 1551 5090 4798 * 2748 5327 4736 * 6686 3440 * * 53 0 * * * * * * 5608 0 0 G 54 4108 * 5560 4811 * 399 * * * * * 6330 * * 6388 4478 6059 6030 5203 * 54 0 * * * * * * 5608 0 0 R 55 4678 * 5889 4780 6059 4468 5676 5928 3396 * * 5282 * 3323 1798 2464 3338 6635 * 6249 55 0 * * * * * * 5608 0 0 F 56 * 5129 * * 1229 * 3851 * * 5967 * * * * * * * * 5547 1191 56 0 * * * * * * 5609 0 0 F 57 3945 * * * 1111 * 4108 5920 * 2840 * * * * * * * 3796 5472 2612 57 0 * * * * * * 5609 0 0 D 58 4422 * 4671 5472 * 4154 3060 * 4449 5666 6069 1615 * 5781 3060 3513 6398 * 6271 4102 58 0 * * * * * * 5609 0 0 G 59 4326 * 3302 3354 * 4078 5557 5226 2577 5040 * 5547 * 3679 2292 3906 3727 * * * 59 0 * * * * * * 5609 0 0 V 60 4862 6963 * 3456 4052 * 2610 5281 4387 5658 * 2078 * 6398 3996 4602 6714 3672 * 3205 60 0 * * * * * * 5609 0 0 I 61 * * * * 6268 * * 167 * * * * * * * * * 3640 * 5942 61 56 4717 * 0 * * * 5609 1947 0 K 62 5468 * * 3643 5131 5761 * * 1075 5594 * * * 6020 1770 5877 * * * 5089 62 13 6788 * 2000 415 * * 5608 1000 0 G 63 6233 * 3283 4245 * 1633 4520 5631 * 4874 5913 2723 2686 5859 6058 4833 5636 * * * 63 141 3686 6006 1617 569 * * 5599 2370 0 K 64 4912 * * 3405 5520 6586 3673 * 2622 * * 3293 * 3761 2106 3070 6113 4931 * 5319 64 94 4446 5866 1841 472 0 * 5586 2005 1000 F 65 * * * * 1147 * * * * * * * * * * * * * * 867 65 0 * * * * 0 * 5533 0 1000 L 66 3753 6294 4668 4279 5872 * 5699 5147 4426 4790 * * 1528 4730 2389 4955 4461 5504 * * 66 0 * * * * * * 5470 0 0 C 67 3132 2945 * 6173 3755 4373 5755 * * 6262 * * 5316 * * 5859 * 4933 6368 997 67 0 * * * * * * 5316 0 0 R 68 5855 * 6212 2252 * 4709 6378 6017 3692 5792 5471 4456 * 3238 1815 4210 4452 5364 5978 * 68 0 * * * * * * 5320 0 0 K 69 5889 * * 3271 * * * * 1141 * 5430 5544 3951 3760 2041 * * * * * 69 0 * * * * * * 5267 0 0 I 70 * * * * * * * 1994 * 2100 * * * * * 4921 * 1051 * * 70 0 * * * * * * 4922 0 0 G 71 * * * * * 0 * * * * * * * * * * * * * * 71 0 * * 0 * * * 3219 0 0 //