HHsearch 1.5 NAME c4qu7B_ FAM FILE c4qu7B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4qu7B_.a3m DATE Sat Aug 16 08:23:15 2014 LENG 79 match states, 79 columns in multiple alignment FILT 123 out of 5697 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.4 EVD 0.4402 0.9967 SEQ >ss_dssp CEEEEEECCCTTCCHHHHHHHHTTSCCSEEEEEECTTSCEEEEEEEECSSHHHHHHHGGGTTCEETTEECEEEEEECCC >sa_dssp ECCACADBBBEEBDDDCADEBADECECEDCDCDEDEEEECDBCACABBEDCECADDACEDDEDEBEEDDACBDDDCEEE >ss_pred CEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCEECCEEEEEEECCCCC >ss_conf 9599974858857898976641141244788678788865008999982999999999868967178699999658999 >Consensus xxxixixnLpxxxtexdixxxFxxxxxxxxxxxxxxxgxxxgxafVxfxxxxxaxxAlxxxxxxlxgRxIxVxxssxpx >c4qu7B_ MHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFLNSCPK >UniRef50_C1FDK2(2-79:220) Putative uncharacterized protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDK2_9CHLO E=0.0001 s/c=0.61 id=18% cov=82% --------MPYDTKVDDIVPWLKAImqrhgcahDIDAVRLagSGNSNKKFKGFAFVDFKTRKAANIVKKFHGTLFRGRKVSV------- >UniRef50_C5FCZ9(465-555:753) Putative uncharacterized protein n=1 Tax=Microsporum canis CBS 113480 RepID=C5FCZ9_NANOT E=0.0001 s/c=0.52 id=16% cov=95% --VLKISNIPYNLLTREVIHFLGrrakllpESRGTSVHIIMERSTAKTMDCYVELLTQADAQEALSwvnrnlpAHSPRLGDRHVLVEMSS--- >UniRef50_B3RQ79(3-80:154) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RQ79_TRIAD E=0.0002 s/c=0.60 id=17% cov=89% ---IFIGGLSFDTTDETLRNYFAKYGDiaDSVVICESGSRKPRGFGFVTYKDVTSVKNCLAGIPHQIDGKTVEV------- >UniRef50_C5LWK2(387-456:632) Putative uncharacterized protein n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LWK2_9ALVE E=0.0003 s/c=0.66 id=14% cov=84% --ILFVYGFPRSYSEDDLKEAFSKFGEVqeaKVKRKWGHRGYGAGYGWIRYANRDECERcvAATKNKMTFQG------------ >UniRef50_UPI0000E460C1(266-333:400) PREDICTED: similar to nucleolin n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E460C1 E=0.0004 s/c=0.67 id=19% cov=75% -----------STTGEQIQEFFEENGVTCSNARM---VKSRKFAYVDVASEEEFNKAIELSESELNGSNIRL------- >UniRef50_Q0U792(15-87:323) Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0U792_PHANO E=0.0005 s/c=0.63 id=17% cov=90% --IIRITNVHFHADEQFIVNIFEGFAIVDQFRTINTRTSTNSVLYILFKTIADRIRSTELNGLTIVDREIKI------- >UniRef50_A4S6R2(6-83:183) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4S6R2_OSTLU E=0.0002 s/c=0.60 id=18% cov=96% ---VFVKDVPASVSERELaDVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVDRALLLDKTPLHGKNIMVKKSDTA- >UniRef50_B6K5P6(7-88:308) RNA-binding protein n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K5P6_SCHJY E=2e-07 s/c=0.70 id=18% cov=100% -NVVFVGNIPYDATEKQMADIFHQIGTVRSFKlvLDPETNQPKGYGFCEFHDPETAASAVRnLNNFPFGARKLRVeFPSNDPR >UniRef50_B0WYU6(199-280:564) Myelin expression factor 2 n=5 Tax=Endopterygota RepID=B0WYU6_CULQU E=2e-05 s/c=0.62 id=20% cov=101% LHTrIFIANLDYKVDAKKLKQVFKlAGKVQNVDLSVDKDGNSRGFAVIEYDHPVEAVQAISMfDRQMLFDRRMTVRLDRVPE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1599 * 2555 1634 * * * * * * 2494 * * 1 0 * * * * * * 3460 0 0 H 2 * * * * * * 1497 * * * * 1977 * 2995 * 4875 * * * 2106 2 0 * * * * * * 6393 0 0 F 3 * 5409 * * 2705 5106 * 2730 3959 * * 5204 * * 5228 5472 2652 2003 5155 3920 3 32 5512 * 0 * * * 7210 1000 0 V 4 * * * * * * * 1678 * 1858 * * * * * * * 1281 * * 4 0 * * * * * * 7734 0 0 H 5 * 4976 * * 1770 * 2996 5739 3400 5773 5800 * * * 2416 5771 * 6182 * 2471 5 0 * * * * * * 7773 0 0 M 6 4884 6046 * * 5515 * * 1595 * 2395 3520 * * * * * * 1640 * * 6 0 * * * * * * 8053 0 0 R 7 4741 * 5271 4498 * 2832 4625 * 2468 * * 4576 * 5921 1934 2797 3907 * * * 7 24 * 5921 * * * * 8088 0 0 G 8 * * 6273 * * 1436 * * * * * 825 * * 6196 5360 * * * 6067 8 0 * * * * * 0 8106 0 1000 L 9 * 4785 * * 4164 * * 2667 * 682 4625 * * * * 6317 * 3751 * * 9 0 * * * * 0 * 8530 0 1000 P 10 4580 5084 3280 5389 * * 4573 * 6733 * * 4387 670 * * 3755 * * * * 10 0 * * * * * * 8583 0 0 F 11 4861 6687 5706 5699 2143 6347 4792 6649 4331 4693 5804 * 4138 4087 5417 5495 4604 5102 3528 2263 11 0 * * * * * * 8572 0 0 Q 12 3879 * 3085 5125 5355 4850 5575 * 3431 6886 5792 2603 * 3654 5008 2408 3307 * 6640 6441 12 0 * * * * * * 8618 0 0 A 13 2387 3483 * * 4908 6441 * 3328 * 3608 4985 * 5812 * * 6917 2425 2137 * 5523 13 0 * * * * * * 8618 0 0 N 14 6196 * 3239 4821 6913 5659 * * 3711 5944 6645 3739 7080 * 4174 2440 1414 5868 * * 14 0 * * * * * * 8802 0 0 A 15 3900 * 3141 1388 6415 * 5708 6994 2809 6981 * 5746 5997 4567 4592 4977 4779 5441 6631 5107 15 0 * * * * * * 8802 0 0 Q 16 4328 7146 2623 2007 * 4391 5592 5803 3504 5812 * 5133 5222 3530 4025 3571 4821 7136 6651 * 16 0 * * * * * * 8802 0 0 D 17 4512 6638 1414 1860 5553 5995 5921 6917 4551 5863 6707 5690 * 4259 6029 5896 4050 * * * 17 0 * * * * * * 8802 0 0 I 18 * * * * 4788 * * 1479 * 1360 5111 * * * * * * 2422 * * 18 83 4162 * 1070 933 * * 8802 3360 0 I 19 4567 5807 6735 3914 5110 5218 5236 3903 2504 3438 4604 6707 * 4190 2246 * 4786 5170 * 3917 19 26 5804 * 1385 697 * * 8802 1694 0 N 20 3895 * 2827 2058 5041 5366 5752 6735 2848 * 7178 4144 6864 3266 3555 5058 5051 6811 * * 20 29 5648 * 0 * * * 8802 1754 0 F 21 4601 5778 * 5866 1773 6676 4233 3588 5200 2279 4909 * * * * 6555 6100 5956 4684 2858 21 27 5752 * 1568 593 * * 8809 1645 0 F 22 6635 5752 * 6676 574 * * 4841 6739 2822 6890 * * 5875 * 4743 * 4594 * * 22 54 4780 * 1479 641 * * 8809 2799 0 A 23 3934 6555 4290 2833 6790 3670 5444 * 3989 * 4883 4439 4810 3664 4644 1904 4637 7085 * 6693 23 97 4139 6869 1319 739 * * 8809 3830 0 P 24 4293 5756 3260 4494 * 2911 4825 6797 3166 * * 4064 3610 3226 3738 3649 4492 4814 * 6654 24 113 3728 * 839 1181 * 0 8794 4648 1000 L 25 5211 3292 * 6915 2329 3539 4983 3624 6633 2880 6100 5990 * * * 5319 5306 3749 7040 2678 25 170 3169 * 1217 812 0 * 8794 5222 1000 K 26 4357 6785 4445 5065 7091 1451 5764 7320 3581 * 5988 3512 6184 5603 3956 3883 4033 4549 * 6474 26 182 3154 7294 565 1625 * * 8807 5453 0 P 27 4848 * 6064 5303 * 4494 5463 2011 4532 4894 6816 5562 2296 6817 4114 5324 4982 2505 * * 27 87 4102 * 958 1043 0 * 8811 4098 1000 V 28 5067 6684 4822 3660 6819 6086 4353 2961 3815 4296 * 4164 4477 5501 5001 4359 3927 2138 * 5187 28 80 4446 6944 845 1174 * * 8807 3632 0 R 29 4437 6815 2658 3577 4940 3803 4114 5313 2972 4464 * 3962 5334 5403 3166 3824 5863 5011 * * 29 51 4843 * 2041 402 0 * 8806 2842 1000 I 30 4209 7009 5472 5699 4294 4992 5565 2095 6019 4055 5475 3977 5247 5525 5763 4172 5471 1984 * * 30 39 5232 * 316 2347 * * 8807 2377 0 T 31 5315 5687 4799 4282 4062 6893 3974 3431 3273 3813 5723 4313 * 4731 3203 4684 4607 2922 5812 5395 31 11 7074 * 1000 1000 * * 8807 1000 0 M 32 5903 * 6420 6791 3451 * 6589 2471 3854 2824 3807 5298 6122 3998 3967 6671 5177 2772 6919 4642 32 47 4953 * 1470 646 * * 8807 2876 0 E 33 4486 4619 5772 7148 5002 6050 4876 2603 5155 2753 4821 * 3253 5304 3967 4677 3945 3189 * 5331 33 9 * 7259 * * * * 8807 0 0 Y 34 5508 6687 4099 * 3576 6784 4788 3945 3382 3705 3669 5058 4613 * 3238 5216 3933 3473 6667 3388 34 36 7098 5849 1585 585 * 0 8804 1000 1000 S 35 5836 5835 1875 4595 * 4635 5459 6657 3657 4883 5459 2647 5900 4931 4290 4304 3562 5834 6421 5853 35 50 5284 6880 0 * * 0 8788 2333 2234 S 36 5501 * 3275 3712 5817 5805 4766 * 2597 5523 5019 4207 2766 4924 3594 3629 4286 4776 * 5473 36 86 4115 * 173 3147 0 * 8777 3832 2786 S 37 5303 6690 2643 3835 5660 5878 3879 6646 4088 * * 3302 5773 3716 3778 3255 2558 6901 * 6681 37 102 3869 * 783 1256 * * 8807 4412 0 G 38 5827 * 4365 5745 6907 1134 5325 6837 3441 5779 * 2787 6712 4665 6791 5316 3981 * * 5949 38 97 3942 * 1340 725 * * 8807 3926 0 K 39 5020 6930 5273 4648 5751 4180 4715 4688 2159 5421 6906 3832 5283 4552 2273 3854 4967 5266 * 5930 39 22 6068 * 0 * * * 8807 1701 0 A 40 5022 5780 6690 4823 3312 4897 4358 5822 3803 6819 5880 3926 3170 5165 3135 1998 4683 * * * 40 71 6721 4693 2585 263 * * 8807 1000 0 T 41 4845 5209 5459 6190 6813 * 5716 5991 1919 5132 6699 4612 6650 5228 2304 3605 2635 * * 4950 41 0 * * * * 1000 1000 8752 0 2852 G 42 6227 4288 6574 * * 668 * * 5204 4701 5778 6012 5630 5375 3791 4146 6964 * * 6051 42 0 * * * * 0 * 8770 0 1822 E 43 6729 5087 3949 3559 1980 * 6963 4431 6407 4934 5403 * * 5360 5768 4232 4013 3837 5306 2454 43 9 7294 * 2322 322 * * 8807 1000 0 A 44 1082 3189 * * 5051 1868 * 5788 * 6399 * * * * * 5871 6246 4219 * * 44 0 * * * * * * 8960 0 0 D 45 6467 * 5813 * 1028 6653 5247 4200 6381 4641 5662 6246 * * 4950 * 5904 5200 * 2128 45 10 * 7109 * * * * 8960 0 0 V 46 3538 4642 * * 5694 6429 * 2047 6243 4072 7017 * * * * * * 942 * * 46 15 6641 * 2322 322 0 * 8806 1000 1000 H 47 5194 * 4133 1564 * 4918 6121 4716 4537 4438 5363 4936 * 3958 4329 8301 3277 3297 * 5407 47 16 6460 * 0 * * * 8960 1000 0 F 48 6526 5802 * * 753 * * * * 3728 3576 * * * * * * 4802 6585 2537 48 38 5783 6971 911 1095 * * 8960 1829 0 E 49 3319 6968 3927 2439 5503 4370 5092 6831 3059 5529 * 4880 4515 4708 3782 3371 3555 * * 5561 49 11 * 7025 * * 0 * 8960 0 1000 T 50 5769 * 2622 5367 5795 5846 4229 * 3810 4761 6796 2922 * 5542 3588 2451 2560 * * * 50 0 * * * * 0 * 8958 0 1000 H 51 4061 * 5869 2526 6460 5540 5004 4222 3238 5578 7014 * 3195 3851 3277 3519 4919 3584 * 6397 51 0 * * * * * * 8960 0 0 E 52 2997 6837 2780 2144 * 6022 4789 6304 4522 6157 * 4716 5376 3183 5905 2901 5857 6208 7179 6381 52 0 * * * * * * 8960 0 0 D 53 2965 6919 2120 2264 6783 4175 7207 6961 6850 6699 6645 5737 * 4010 * 2809 5466 4197 * 5858 53 0 * * * * * * 8960 0 0 A 54 914 5077 * * 5234 6381 * 6971 4839 3768 5415 * * * 5179 6634 3635 3208 * 4831 54 0 * * * * * * 8960 0 0 V 55 4040 * 3690 2871 6585 * 5671 4903 3169 4362 6645 3802 * 2184 4475 4855 4218 4283 * 6023 55 29 5666 * 552 1652 * * 8960 1785 0 A 56 2890 6634 5881 3329 * * * 4804 2127 3885 6990 4258 * 3188 3092 4382 4821 5309 * 6570 56 15 6600 * 1585 585 * * 8960 1000 0 A 57 354 4334 * * 6423 * * 4851 * 5928 * * * 6504 * 4778 6761 4662 6744 * 57 121 3807 6795 0 * * * 8924 4318 0 M 58 4692 5805 * 6880 5008 * 6794 2504 5470 1362 3175 * * 5326 4758 5913 6299 3369 6943 * 58 147 3369 * 0 * 0 * 8865 4598 1000 L 59 3256 5999 4956 2141 * * * * 2733 4563 * 3927 * 3641 3209 3262 3843 * * * 59 179 3098 * 626 1506 * * 8871 5232 0 K 60 4406 6627 5403 * 3651 * 6531 * 2635 1750 3091 6435 * 4013 3385 6815 4118 5845 * * 60 161 3245 * 314 2353 * * 8668 4738 0 D 61 6570 * 2344 5546 * 6406 2113 * * 6722 * 1581 * 5531 6675 3031 5029 * * * 61 0 * * * * * * 8658 0 0 R 62 6708 6617 6691 4333 * 1237 5141 6655 2970 5798 * 3107 5522 5052 3485 5666 5276 * * 6650 62 27 6702 6765 1000 1000 * * 8648 1000 0 S 63 6247 4642 * 4092 4833 4937 3743 5068 2588 4516 5482 * 5542 3690 3910 2612 3576 4394 * 5444 63 14 6644 * 2807 222 0 * 8623 1000 1000 H 64 6796 * 5669 4314 4142 * 3759 5496 2666 3850 3833 5352 5897 3833 4421 4941 3513 4194 * 2853 64 66 4484 * 325 2311 * * 8626 2835 0 V 65 * 5367 * * 2831 * * 1779 * 1440 3412 * * * * * * 4103 * 5442 65 0 * * * * * * 8626 0 0 H 66 5629 * 3925 3998 5180 1647 4507 6555 3195 5456 3688 3780 * 4334 3575 6631 * 6133 * 6681 66 16 6481 * 0 * * * 8505 1000 0 H 67 6712 6202 3144 3967 6889 1150 6676 * 4640 6391 * 2777 6697 * 4990 4383 4945 * * 6440 67 18 6340 * 1000 1000 * * 8506 1000 0 R 68 6648 * * 6128 * 6607 5540 * 3016 * 6877 4646 6386 5127 600 4677 * 5510 * 6567 68 0 * * * * * * 8258 0 0 Y 69 3748 5541 6191 3465 * 5951 4376 3865 3179 4417 5255 4864 3422 3831 4067 6541 4386 6161 * 2705 69 52 5376 6429 0 * * * 8058 1672 0 I 70 * 6148 * * * * * 776 * 2739 5381 * * * * * * 2132 * * 70 0 * * * * 0 * 8056 0 1000 E 71 * * 6008 1953 5165 * 3948 6248 2707 5207 * 4711 6017 3900 2412 3931 4722 6083 * 6218 71 18 6328 * 1000 1000 * * 8007 1000 0 L 72 6189 * * * * * * 2537 6193 2633 4551 * * * * * * 745 * * 72 113 3726 * 1077 927 * * 8007 2384 0 F 73 4134 * 6088 3628 2087 5311 5607 * 3306 4419 5472 3550 * 5658 3280 4690 4636 * 5427 3547 73 34 5415 * 0 * * * 7445 1000 0 L 74 5444 * * 3883 * * * 3525 5673 2123 5534 * 2113 5259 2664 5492 * 3900 5380 5417 74 34 5435 * 0 * * * 7309 1000 0 N 75 3047 5309 3400 * * * * 4413 * * * 5445 5383 * * 754 5548 5228 * 5377 75 0 * * * * * * 7183 0 0 S 76 5014 * * 4224 * * * * 4246 * * 2248 * 4159 5217 1190 3233 5341 * * 76 0 * * * * * * 6967 0 0 C 77 2849 4932 3438 * * * * * 3869 * * 3972 3312 * 2908 3334 3277 2576 * * 77 53 4804 * 0 * * * 6582 1000 0 P 78 2251 * * * * * * * 3779 * * * 553 * * 4811 * * * * 78 0 * * * * * * 6436 0 0 K 79 * * * 2140 * * * * 1180 * * * * 2298 2960 * * * * * 79 0 * * 0 * * * 5845 0 0 //