HHsearch 1.5 NAME c4qrlA_ FAM FILE c4qrlA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4qrlA_.a3m DATE Sat Aug 30 08:12:13 2014 LENG 110 match states, 110 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4121 -1.1346 SEQ >ss_dssp CCSCEEEEEEEEECTTSCEEEEEEEEEEEETTEEEEEEECTTSCEEEEEEEEEEETTEEEEEECHHHHTSTTHHHHTCCGGGEEEEEEEEECSSEEEEEE TTEEEEEEEC >sa_dssp EDBDCCABADCCDDEEEEEEECECBBACADECDACACADCEEECEBCADBDBEEEEEDACADBDEEBCECECBEECBDCEEADBDBDCCDDCEECADACD ECCCBCADCE >ss_pred CCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCCCHHEEEEECCCCCCCCEEEEECCCCEEEEEE CCEEEEEEEC >ss_conf 9746528799998248862344237886414022121103878864489998831765776406644374100765057988641489980488899971 7369999839 >Consensus GxLdGxWqLxxixtxxGxxxxxxrifxsxQxxlxexxxxxxxxxxxxfxgrfxxxxdxlxxxxxxxxvxxxxxlxxxGixxxxxtFxVexlxxxkliLxs dxxrLxFrKF >c4qrlA_ GDLAGKWQLRQYQYADGTSEKVDSVFYNFQKGSFSAICLLKDGGLTTFFGNYSLKGAEISIILLPESVNDKNYDTYFGWPEGKCTFKVEDLSYSSLRLEY EGTKSIFRKF >UniRef50_A6LBR8(25-134:134) Putative uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LBR8_PARD8 E=7e-32 s/c=1.25 id=36% cov=96% --LEGKWQLKTVE-ANGVVQTVDTVWYNFQTSLFEY--QLYDPAKDVYRTNFGYKTLEEDTRLDLELVNYggtplEQFMRYTDWTSPKQTFTIEQSSVTN LVMSCEGRTYTFKKF >UniRef50_Q5LF04(21-121:121) Putative uncharacterized protein n=5 Tax=Bacteroides RepID=Q5LF04_BACFN E=7e-05 s/c=0.48 id=27% cov=93% --LDGMWQMQRIEYKDGNIDTPLDTYFSFQMD----IIHLRKLGNSEFYGKYVYENDSMHIQVLDATAEQ---MKVFGMDGRVQDFAVEKLNSNKLVLQS DYARLEFRKY >UniRef50_B5D3D3(29-149:149) Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D3D3_9BACE E=5e-05 s/c=0.40 id=15% cov=100% -NVEGFWILERFTVTEtGETVECERLYYSITRMVTEVAEKNGSKGYGAYIGRTEYRNGETQLVVKDFKVRKStgdngqdapvEKLKHFGIGNQQETvFDI EYCNGKKMTLQSDYARLELTKF >UniRef50_UPI000197AEF4(42-160:160) hypothetical protein BACCOPRO_00698 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197AEF4 E=4e-28 s/c=1.05 id=24% cov=100% -NIEGFWQLLEFTTqADGETHPCNRIYYSIQLWVAEVSERGGDLGAGSFRGRYRYDEEtntvtlkEMSTYATPENSRPAtqEELHPFGLDSTDTTFDVIK ADGKWLILKSDYATLTLKRF >UniRef50_D1QTF6(25-142:143) Putative uncharacterized protein n=1 Tax=Prevotella oris F0302 RepID=D1QTF6_9BACT E=1e-19 s/c=0.83 id=21% cov=97% GKLDGFWQLIAVDTlatqHTSDLKTSGRTW-AFQGRLLEM--RDTKGGYSDLYFSFEHRGDSLfldspylsDRDVDDIKITDVNIVRPYGVNGLKEGFEI ESLSNNKLILRSKTLRLMLRK- >UniRef50_C5VIT2(30-149:149) Putative liporotein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VIT2_9BACT E=1e-07 s/c=0.48 id=15% cov=99% GRMEGMWHLVKIESMTSAANEDLSeqvVFWSFQAKLLQMEDKTGQHY--SYLYRFRIDNDQLALTspyqfdrenGDQPLTAYESTLGLYGIKSLTPVFRI EKIDRRKMILNDGAVRLYFDKF >UniRef50_D1PGG1(28-152:152) Putative uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGG1_9BACT E=3e-24 s/c=0.90 id=21% cov=101% GDLDGFWHLEQVDTlaTGGTCNFADkRVFWGCQYKLIQVADYDCFEAGRGFYLRFEQTSDSLlitsvyrnkwheDYGGDVLLTEMNDSLRSCGINHLNEH FAKEVLTGGKMQLKSKTLRLRFRKF >UniRef50_D1W2G5(28-146:146) Putative lipoprotein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W2G5_9BACT E=3e-23 s/c=0.92 id=21% cov=99% GALDGYWRLQQVDTlqTNGTADlSAQRLFWSVQGKILMLNDLDYR--YPECVMEFEHRDQRLtlhrplisDRTKGDPVIDDVKILYPYGIRRLDEQFEVE RLDGSRMILRSEQLRLVFTKF >UniRef50_C9LI63(25-150:150) Putative uncharacterized protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LI63_9BACT E=6e-21 s/c=0.80 id=23% cov=101% GKLDGRWQLMEVSYLDGSNRTVKTkeqlIFWDIQYKLISIHSMTGKLHEsltEESLCRFNFTGDSLklsdfyrHYREADQKIDDPLTTCFqkTGINGIKA NFAVLHLDRKTMLLQSDYAKLSFRKF # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 3520 0 0 D 2 3820 * 1579 * * * * * 1900 * * 1952 * * 3877 * * * * * 2 0 * * * * * * 4162 0 0 L 3 * * * * * * * 3314 * 568 4175 * * * * * * 3135 4168 * 3 0 * * * * * * 4508 0 0 A 4 4412 * 1065 1246 * * * * * * * * * * * * * 4228 * * 4 0 * * * * * * 4545 0 0 G 5 * * * * * 75 * * * * * 4303 * * * * * * * * 5 0 * * * * * * 4545 0 0 K 6 * * * * 1980 * 4394 * 2183 4328 2212 * * * 3253 * * * * 3207 6 0 * * * * * * 4545 0 0 W 7 * * * * * * * * * * * * * * * * * * 0 * 7 0 * * * * * * 4545 0 0 Q 8 * * * * * * 2574 4188 4350 * * * * 804 2685 * * * * * 8 0 * * * * * * 4545 0 0 L 9 * * * * * * * * * 86 4113 * * * * * * * * * 9 0 * * * * * * 4545 0 0 R 10 * * * 2263 * * * 4346 3854 3462 3253 * * 2590 2727 * 4328 3175 * * 10 0 * * * * * * 4545 0 0 Q 11 4346 * * 2278 * 4328 * * 3175 * * * * 1688 2628 * 3159 * * * 11 0 * * * * * * 4545 0 0 Y 12 * * * * 2048 * * 1664 * * * * * * * * * 1778 * 2727 12 0 * * * * * * 4545 0 0 Q 13 * * 1919 1834 * * * * * * * * * 2727 * 4010 2048 * * * 13 103 * 3854 * * * * 4545 0 0 Y 14 * * * 4034 * * * * * * * * * * * 4133 1053 4119 * 1547 14 689 1396 * 912 1094 0 * 4396 2924 1000 A 15 1957 * * * * 4202 3375 * 3226 3068 4222 * 4228 * * * 1951 * * * 15 73 4350 * 0 * * * 4545 1000 0 D 16 4129 * 1284 3292 * 3224 * * * * * 2591 * * * * 2670 * * * 16 81 4188 * 0 * * * 4545 1000 0 G 17 * * 4404 * * 424 * * * * * 4394 * * * 3283 4129 * * * 17 0 * * * * * * 4545 0 0 T 18 3285 * 4346 3351 * 4202 * * 3378 * * 4113 * 4394 * 1905 2660 3854 * * 18 0 * * * * * * 4545 0 0 S 19 3217 4127 * * * * * 2724 * 3337 * 4010 * * * 4412 2688 1641 * * 19 70 4404 * 1000 1000 * * 4545 1000 0 E 20 * * 2630 3477 * * 2839 * 2765 * * 2169 * 3029 4010 * * 4188 * * 20 158 3269 * 0 * * * 4545 1431 0 K 21 * * 4404 2320 4127 * * * 3317 * * * 3462 * 4303 4211 1324 * * * 21 0 * * * * * * 4545 0 0 V 22 3169 2085 3175 * * * * * * * 4202 * 3226 4303 * 4346 4328 2111 * * 22 0 * * * * * * 4545 0 0 D 23 * * 1612 2723 * 4346 * * 4010 3166 * 3540 * 2685 * * * 4129 * * 23 171 3164 * 576 1603 * * 4545 1498 0 S 24 * * 4113 * * * * * * * * * * * 865 1934 2930 * * * 24 274 2533 * 1745 511 * * 4545 1896 0 V 25 * * * * * * * 1301 4328 3199 3300 * * * * * 3224 2140 * * 25 0 * * * * * * 4545 0 0 F 26 * * * * 772 * * * * * * * * * * * * * 3079 1756 26 73 * 4346 * * * * 4545 0 0 Y 27 * * * * 3166 * * * * 4207 * * * * * * * * 1475 1075 27 0 * * * * 0 * 4501 0 1000 N 28 2706 * 4010 * * 2647 * * * * * 2584 * * * 1126 * * * * 28 0 * * * * * * 4545 0 0 F 29 * 4127 * * 1191 * * 1318 * * * * * * * * * 3269 * * 29 0 * * * * * * 4545 0 0 Q 30 * * * * * * * * * * * * * 158 * * 3266 * * * 30 0 * * * * * * 4545 0 0 K 31 3175 * * * * 2709 4202 * 2727 2468 4113 * * * 3266 * 3854 * * 3067 31 0 * * * * * * 4545 0 0 G 32 * * 4113 * * 2316 4545 * 1563 * 4188 * * * 4346 3854 * * 2858 4350 32 86 * 4113 * * * * 4545 0 0 S 33 * * * * 4267 * * 4143 * 1080 * * * * * 2641 * 1953 * * 33 0 * * * * * 0 4452 0 1000 F 34 4431 * * * 2100 * * 2980 * 1574 * * * * * * 4092 2329 * * 34 0 * * * * * 0 4452 0 1000 S 35 * * * 888 * * * * * 4149 4143 * * 2507 * 2552 * * * * 35 0 * * * * * 0 4452 0 1000 A 36 2641 * * * * * * 2599 * 2527 3178 * * * * * * 1655 * 3775 36 506 * 1756 * * 0 * 4452 0 1000 I 37 1543 * * 3457 * * 3594 2256 * * * 3527 * * * 3082 * * * 3864 37 0 * * * * * 0 4086 0 2745 C 38 4022 2323 1928 1667 * * * 3677 * * * * * * * 3594 * * * * 38 0 * * * * 0 * 4086 0 2745 L 39 * * * 4129 * * 4113 * 2023 2721 3115 * * 3854 2026 * * * * 4127 39 0 * * * * * * 4545 0 0 L 40 * * 1636 * * 3540 * * * 2155 * 3208 * 2798 * * 3112 * * * 40 0 * * * * * * 4545 0 0 K 41 4328 3259 * * * 1502 * 4202 2264 * * * * * 4113 * 4346 * * 3022 41 0 * * * * * * 4545 0 0 D 42 * * 1925 * 4127 * * * 2564 * * 3419 4394 4222 4211 3208 2704 * * * 42 80 * 4211 * * * * 4545 0 0 G 43 * * * 4037 * 1407 3225 * 4113 2551 4188 * 3798 3322 * * * * * * 43 0 * * * * * 0 4471 0 1000 G 44 2379 * * * * 1263 3932 * 4344 * * 4061 * * * 2649 * * * 4132 44 245 * 2678 * * 0 * 4471 0 1000 L 45 4233 * * 3798 * 3914 3631 * 3710 3225 * 3938 * * * * * 3963 * 1268 45 108 3798 * 1585 585 1622 567 4440 1000 2042 T 46 4082 * 3760 2466 * 2208 * * * * * * 4098 4201 4005 2375 3296 * * * 46 0 * * * * 0 * 4474 0 1660 T 47 4188 * 3348 2524 * 3177 * * 3264 * * * * * * 2311 2413 3854 * * 47 0 * * * * * * 4545 0 0 F 48 * 3207 * * 1142 * 4545 * * 4346 * * * * * 4010 * * * 1813 48 0 * * * * * * 4545 0 0 F 49 * * * * 3356 * * 2366 * 2138 4328 * * * 2645 * * 4211 * 2200 49 0 * * * * * * 4545 0 0 G 50 * 4010 * * 3337 1019 * * * 3164 4211 * * * * * 3854 * * 3175 50 0 * * * * * * 4545 0 0 N 51 * * * 4211 * * * * 4113 * * 2584 * * 692 4346 * * * 4228 51 0 * * * * * * 4545 0 0 Y 52 * * * * 631 * * * * * * * * * * * 4188 * * 1739 52 0 * * * * * * 4545 0 0 S 53 * * * 1891 * 3081 * * 4228 * * 3068 * 4394 3370 2074 * 4113 * * 53 0 * * * * * * 4545 0 0 L 54 * * * * 4010 * 3277 3175 4202 2727 * * * 4127 * * * * * 1116 54 70 4394 * 2807 222 * * 4545 1000 0 K 55 * * 2771 2712 * * * * 1927 * * 4129 * 4202 2662 * 2570 * * * 55 0 * * * * * * 4545 0 0 G 56 * * 2677 4534 * 1491 * * * * 4394 1885 * * * 4127 3854 * * * 56 0 * * * * * * 4545 0 0 A 57 3403 * 914 3439 * 4188 * * * 3854 * 3260 * 4211 * * * * * * 57 64 4534 * 2807 222 * * 4545 1000 0 E 58 * * * 1482 * 4350 * * 3353 * * * * 2639 4211 1833 * * * * 58 0 * * * * * * 4545 0 0 I 59 * * * 3854 * * * 2727 * 1193 2751 * * 4404 4350 * 4188 4545 * * 59 570 1614 * 3087 181 * * 4545 2613 0 S 60 3175 * 1584 4350 * * 3060 * 4404 * * * * 4188 * 2048 4545 * * * 60 0 * * * * * * 4545 0 0 I 61 4350 * * * * * * 2260 * 2594 4545 * * * 2270 * 2645 4404 * 3067 61 63 4545 * 2322 322 * * 4545 1000 0 I 62 * * 4346 4202 * 4127 * 3356 * * * * * 4113 2522 3225 2636 2726 * 3462 62 169 3175 * 3170 170 * * 4545 1303 0 L 63 4534 * 4394 4010 * 2246 * * 4211 1889 3377 4202 * * * * * 2627 * * 63 0 * * * * * * 4545 0 0 L 64 4010 * 1603 * * 2661 * * 3292 2685 * * * * * 4350 3462 * 4228 * 64 0 * * * * * * 4545 0 0 P 65 * * 1220 3444 * * 4129 * * 3854 * * 2048 4222 * * * 4127 * * 65 153 3314 * 4015 92 * * 4545 1759 0 E 66 4113 * * 1319 3266 * * 4346 4202 4127 * * 2221 4010 * * * * * * 66 0 * * * * * * 4545 0 0 S 67 * * * 4328 * * * 4404 1955 1783 * 3462 4202 * * 3356 4113 4211 * * 67 0 * * * * * * 4545 0 0 V 68 4113 * * * * * * 2235 * 3363 * * * * * 3462 2574 1419 * * 68 0 * * * * * * 4545 0 0 N 69 3274 * 3107 2593 * * * * * * * 2561 * * 2361 * 2297 * * 4404 69 73 4350 * 3322 152 * * 4545 1000 0 D 70 * * 1932 * * * * * 4188 * 4127 4202 2858 4113 * 4228 3444 * * 2117 70 196 3854 4113 2322 322 * * 4545 1000 0 K 71 2710 * 4071 2445 * * * 4310 4332 3345 * 4056 3907 * * 4092 4123 2620 * * 71 160 3251 * 2695 242 * 0 4452 1487 1000 N 72 4267 * 4056 1915 * * * * 4143 3907 * 2741 * 3775 * 2202 4071 * * * 72 74 4318 * 1000 1000 * 0 4452 1000 1000 Y 73 * * * 2813 3775 * * 2572 3197 * * * * 4248 * 3063 3024 4267 * 2641 73 0 * * * * 0 * 4452 0 1000 D 74 4303 * 4412 * * * * * 4228 711 2978 * * * * * 4010 4346 * * 74 0 * * * * * * 4545 0 0 T 75 4129 4010 * 4394 4303 4222 4534 * 2289 * * 4228 * 3300 2510 * 3369 * * 4211 75 0 * * * * * * 4545 0 0 Y 76 * * * * 3115 * 3195 * * 3175 * * 1385 * * 4127 * 4113 * 2584 76 92 4010 * 1000 1000 * * 4545 1000 0 F 77 * 4127 * * 1523 * * * * * 4303 * * * * * 2930 * * 1276 77 0 * * * * * * 4545 0 0 G 78 * * 3854 * * 103 * * * * * * * * * * * * * * 78 0 * * * * * * 4545 0 0 W 79 * * * * * * * 1044 * 2905 4113 * * * * * * 3272 2183 * 79 0 * * * * * * 4545 0 0 P 80 * * 3308 4303 * 2669 * * 3175 * * 1285 4412 * 4211 * 3854 * * * 80 0 * * * * * * 4545 0 0 E 81 4350 * 4228 4412 * 2564 4127 * * * * 2707 * 4545 2661 2230 4129 * * * 81 79 4228 * 0 * * * 4545 1000 0 G 82 4545 * * * * 2727 * 4010 * 1453 3235 * 3854 4188 4113 * 4534 4394 * * 82 0 * * * * * * 4545 0 0 K 83 * * 3364 2320 * * * 4545 2137 * * 2652 * 4188 * 4328 3175 4113 * * 83 0 * * * * * * 4545 0 0 C 84 4010 4412 * 1647 * * * * * * * 4545 3175 2978 3265 * 2419 * * * 84 0 * * * * * * 4545 0 0 T 85 * * 4113 * * 4346 2695 * * * * 4010 * 4211 * * 814 4222 * * 85 81 4188 * 0 * * * 4545 1000 0 F 86 * * * * 152 * * * * 3322 * * * * * * * * * * 86 0 * * * * * * 4545 0 0 K 87 2497 * 3351 3277 * * * * 2056 * * 4404 * 4129 2672 * 3061 * * * 87 0 * * * * * * 4545 0 0 V 88 * * * * * * * 1191 4127 * * * * * * * * 986 * * 88 0 * * * * * * 4545 0 0 E 89 * * 4202 522 * * * 2858 * 4010 * * * * * * * 4350 * * 89 0 * * * * * * 4545 0 0 D 90 * * 4412 3265 * * 4010 * 1542 * * 4202 * 3854 4211 3233 4394 4127 * 4188 90 0 * * * * * * 4545 0 0 L 91 2456 4188 * * * * * 4222 4129 901 * * * * * 3099 * * * * 91 0 * * * * * * 4545 0 0 S 92 * * 1488 * * * * * 4129 * * 3150 * * * 2211 1957 * * * 92 0 * * * * * * 4545 0 0 Y 93 * * 4228 * * 1329 * * 3255 * * 4346 * * 3112 2619 * 3854 * 4412 93 0 * * * * * * 4545 0 0 S 94 * * * * * 3128 * * 1321 * * 3224 * * 4222 1967 3854 * * * 94 0 * * * * * * 4545 0 0 S 95 4350 * * * * * 4404 * 1231 * * 3854 * * 2661 3356 4010 * 4534 4394 95 0 * * * * * * 4545 0 0 L 96 * * * * * * * * * 829 1194 * * * * * * * * * 96 0 * * * * * * 4545 0 0 R 97 * * * * * * * 1737 * 4010 * * * 4127 2727 * 2740 1836 * * 97 0 * * * * * * 4545 0 0 L 98 * * * * * * * * * 103 3854 * * * * * * * * * 98 0 * * * * * * 4545 0 0 E 99 * * * 2050 * * * * 2804 * * 3225 * 2517 3277 2469 * 4328 * * 99 0 * * * * * * 4545 0 0 Y 100 * 3854 3175 * * * 4303 * * * * * * * * 580 * * * 3317 100 0 * * * * * * 4545 0 0 E 101 * * 1306 1867 * 3175 * * 3232 * * * * * 4202 4328 * * * * 101 0 * * * * * * 4545 0 0 G 102 4222 * * * * 2183 * * 4202 * * * * 4211 * 4129 2678 * * 1306 102 0 * * * * * * 4545 0 0 T 103 1306 4202 * * * * * * * 2250 * * * * 3854 * 3317 2631 * * 103 0 * * * * * * 4545 0 0 K 104 * * * * * * * 4394 2187 * * * * * 932 * 2261 * * * 104 0 * * * * * * 4545 0 0 S 105 * * * * * * * * * 359 * * * * * 3356 * * * 3029 105 0 * * * * * * 4545 0 0 I 106 * * * 2259 * * 4202 2762 * * 4346 * * * 3254 4010 2688 3220 * 3175 106 0 * * * * * * 4545 0 0 F 107 * * * * 407 * * * * 2349 * * * * * * * * * 4328 107 0 * * * * * * 4545 0 0 R 108 * * 3175 * * * * * 2259 * * * * * 1089 * 2680 4202 * * 108 0 * * * * * * 4545 0 0 K 109 * * * * * * * * 217 * * * * * 3439 4404 * * * * 109 0 * * * * * * 4545 0 0 F 110 * * * * 360 * * * * * * * * * * * * * * 2179 110 0 * * 0 * * * 4501 0 0 //